X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/d4c8504da527f1a984ecd1ed0da7147010f38b6e..6386f2aca83b477210bda19a3284ea31463d2efc:/sdk/cli/bin/arv-run-pipeline-instance diff --git a/sdk/cli/bin/arv-run-pipeline-instance b/sdk/cli/bin/arv-run-pipeline-instance index c2e0145ab7..b19bf04dd6 100755 --- a/sdk/cli/bin/arv-run-pipeline-instance +++ b/sdk/cli/bin/arv-run-pipeline-instance @@ -495,6 +495,10 @@ class WhRunPipelineInstance moretodo = true interrupted = false + if @instance[:started_at].nil? + @instance[:started_at] = Time.now + end + job_creation_failed = 0 while moretodo moretodo = false @@ -569,25 +573,45 @@ class WhRunPipelineInstance fetch_template(@instance[:pipeline_template_uuid]) pipeline_name = @template[:name] end - output_name = c[:output_name] || "Output of #{cname} of #{pipeline_name}" - # Create a collection located in the same project as the pipeline with the contents of the output. - portable_data_hash = c[:job][:output] - collections = $arv.collection.list(limit: 1, - filters: [['portable_data_hash', '=', portable_data_hash]], - select: ["portable_data_hash", "manifest_text"] - )[:items] - if collections.any? - newcollection = { - owner_uuid: owner_uuid, - name: "#{output_name} at #{c[:job][:finished_at]}", - portable_data_hash: collections.first[:portable_data_hash], - manifest_text: collections.first[:manifest_text] - } - debuglog "Creating collection #{newcollection}", 0 - newcollection_actual = $arv.collection.create collection: newcollection - c[:output_uuid] = newcollection_actual[:uuid] - else - debuglog "Could not find a collection with portable data hash #{portable_data_hash}", 0 + if c[:output_name] != false + # Create a collection located in the same project as the pipeline with the contents of the output. + portable_data_hash = c[:job][:output] + collections = $arv.collection.list(limit: 1, + filters: [['portable_data_hash', '=', portable_data_hash]], + select: ["portable_data_hash", "manifest_text"] + )[:items] + if collections.any? + name = c[:output_name] || "Output #{portable_data_hash[0..7]} of #{cname} of #{pipeline_name}" + + # check if there is a name collision. + name_collisions = $arv.collection.list(filters: [["owner_uuid", "=", owner_uuid], + ["name", "=", name]])[:items] + + newcollection_actual = nil + if name_collisions.any? and name_collisions.first[:portable_data_hash] == portable_data_hash + # There is already a collection with the same name and the + # same contents, so just point to that. + newcollection_actual = name_collisions.first + end + + if newcollection_actual.nil? + # Did not find a collection with the same name (or the + # collection has a different portable data hash) so create + # a new collection with ensure_unique_name: true. + newcollection = { + owner_uuid: owner_uuid, + name: name, + portable_data_hash: collections.first[:portable_data_hash], + manifest_text: collections.first[:manifest_text] + } + debuglog "Creating collection #{newcollection}", 0 + newcollection_actual = $arv.collection.create collection: newcollection, ensure_unique_name: true + end + + c[:output_uuid] = newcollection_actual[:uuid] + else + debuglog "Could not find a collection with portable data hash #{portable_data_hash}", 0 + end end end elsif c[:job][:running] || @@ -659,6 +683,10 @@ class WhRunPipelineInstance end end + if @instance[:finished_at].nil? and ['Complete', 'Failed'].include? @instance[:state] + @instance[:finished_at] = Time.now + end + debuglog "pipeline instance state is #{@instance[:state]}" # set components_summary @@ -722,6 +750,7 @@ class WhRunPipelineInstance if ["New", "Ready", "RunningOnClient", "RunningOnServer"].include?(@instance[:state]) @instance[:state] = "Failed" + @instance[:finished_at] = Time.now @instance.save end @instance.log_stderr(msg)