X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/d4a9835195f1c87d6d3436050d55bc60ba031259..adfe146695a6acebe65b7953db1e8a88dc53a6b4:/sdk/cwl/arvados_cwl/arvjob.py diff --git a/sdk/cwl/arvados_cwl/arvjob.py b/sdk/cwl/arvados_cwl/arvjob.py index 9f11058b9e..a688469634 100644 --- a/sdk/cwl/arvados_cwl/arvjob.py +++ b/sdk/cwl/arvados_cwl/arvjob.py @@ -51,7 +51,7 @@ class ArvadosJob(object): if p.type == "CreateFile": script_parameters["task.vwd"][p.target] = "$(task.keep)/%s/%s" % (vwd.portable_data_hash(), p.target) - script_parameters["task.env"] = {"TMPDIR": "$(task.tmpdir)"} + script_parameters["task.env"] = {"TMPDIR": self.tmpdir, "HOME": self.outdir} if self.environment: script_parameters["task.env"].update(self.environment)