X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/cbba74fcd57b7b81337d44c2e663ba317e6538de..79af4043ed667b8f81613cb8e4bf88b0450ae8a6:/sdk/cwl/tests/test_container.py diff --git a/sdk/cwl/tests/test_container.py b/sdk/cwl/tests/test_container.py index e06003769b..7dd14a0eb7 100644 --- a/sdk/cwl/tests/test_container.py +++ b/sdk/cwl/tests/test_container.py @@ -6,6 +6,8 @@ import os import functools import cwltool.process +from schema_salad.ref_resolver import Loader + if not os.getenv('ARVADOS_DEBUG'): logging.getLogger('arvados.cwl-runner').setLevel(logging.WARN) logging.getLogger('arvados.arv-run').setLevel(logging.WARN) @@ -35,7 +37,7 @@ class TestContainer(unittest.TestCase): } make_fs_access=functools.partial(arvados_cwl.CollectionFsAccess, api_client=runner.api) arvtool = arvados_cwl.ArvadosCommandTool(runner, tool, work_api="containers", avsc_names=avsc_names, - basedir="", make_fs_access=make_fs_access) + basedir="", make_fs_access=make_fs_access, loader=Loader({})) arvtool.formatgraph = None for j in arvtool.job({}, mock.MagicMock(), basedir="", name="test_run", make_fs_access=make_fs_access, tmpdir="/tmp"): @@ -88,7 +90,8 @@ class TestContainer(unittest.TestCase): } make_fs_access=functools.partial(arvados_cwl.CollectionFsAccess, api_client=runner.api) arvtool = arvados_cwl.ArvadosCommandTool(runner, tool, work_api="containers", - avsc_names=avsc_names, make_fs_access=make_fs_access) + avsc_names=avsc_names, make_fs_access=make_fs_access, + loader=Loader({})) arvtool.formatgraph = None for j in arvtool.job({}, mock.MagicMock(), basedir="", name="test_resource_requirements", make_fs_access=make_fs_access, tmpdir="/tmp"):