X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/ca2d946973b6ae25dd594ddecec54e02b83bc44e..2f66d4cc05e9442a9bb69969744d0750a02a1ed4:/build/run-build-packages.sh

diff --git a/build/run-build-packages.sh b/build/run-build-packages.sh
index 6264e93f0f..4faa1c6b0d 100755
--- a/build/run-build-packages.sh
+++ b/build/run-build-packages.sh
@@ -19,9 +19,12 @@ Options:
 --debug
     Output debug information (default: false)
 --target <target>
-    Distribution to build packages for (default: debian8)
+    Distribution to build packages for (default: debian10)
 --only-build <package>
     Build only a specific package (or $ONLY_BUILD from environment)
+--force-build
+    Build even if the package exists upstream or if it has already been
+    built locally
 --command
     Build command to execute (defaults to the run command defined in the
     Docker image)
@@ -35,18 +38,19 @@ EOF
 # set to --no-cache-dir to disable pip caching
 CACHE_FLAG=
 
-MAINTAINER="Ward Vandewege <wvandewege@veritasgenetics.com>"
-VENDOR="Veritas Genetics, Inc."
+MAINTAINER="Arvados Package Maintainers <packaging@arvados.org>"
+VENDOR="The Arvados Project"
 
 # End of user configuration
 
 DEBUG=${ARVADOS_DEBUG:-0}
+FORCE_BUILD=${FORCE_BUILD:-0}
 EXITCODE=0
-TARGET=debian8
+TARGET=debian10
 COMMAND=
 
 PARSEDOPTS=$(getopt --name "$0" --longoptions \
-    help,build-bundle-packages,debug,target:,only-build: \
+    help,build-bundle-packages,debug,target:,only-build:,force-build \
     -- "" "$@")
 if [ $? -ne 0 ]; then
     exit 1
@@ -66,6 +70,9 @@ while [ $# -gt 0 ]; do
         --only-build)
             ONLY_BUILD="$2"; shift
             ;;
+        --force-build)
+            FORCE_BUILD=1
+            ;;
         --debug)
             DEBUG=1
             ;;
@@ -127,7 +134,7 @@ case "$TARGET" in
         PYTHON2_INSTALL_LIB=lib/python$PYTHON2_VERSION/site-packages
         PYTHON3_PACKAGE=$(rpm -qf "$(which python$PYTHON3_VERSION)" --queryformat '%{NAME}\n')
         PYTHON3_PKG_PREFIX=$PYTHON3_PACKAGE
-        PYTHON3_PREFIX=/opt/rh/rh-python35/root/usr
+        PYTHON3_PREFIX=/opt/rh/rh-python36/root/usr
         PYTHON3_INSTALL_LIB=lib/python$PYTHON3_VERSION/site-packages
         export PYCURL_SSL_LIBRARY=nss
         ;;
@@ -157,14 +164,6 @@ if [[ "$?" != 0 ]]; then
   exit 1
 fi
 
-PYTHON2_FPM_INSTALLER=(--python-easyinstall "$(find_python_program easy_install-$PYTHON2_VERSION easy_install)")
-install3=$(find_python_program easy_install-$PYTHON3_VERSION easy_install3 pip-$PYTHON3_VERSION pip3)
-if [[ $install3 =~ easy_ ]]; then
-    PYTHON3_FPM_INSTALLER=(--python-easyinstall "$install3")
-else
-    PYTHON3_FPM_INSTALLER=(--python-pip "$install3")
-fi
-
 RUN_BUILD_PACKAGES_PATH="`dirname \"$0\"`"
 RUN_BUILD_PACKAGES_PATH="`( cd \"$RUN_BUILD_PACKAGES_PATH\" && pwd )`"  # absolutized and normalized
 if [ -z "$RUN_BUILD_PACKAGES_PATH" ] ; then
@@ -281,7 +280,6 @@ debug_echo -e "\nPython packages\n"
 # Go binaries
 cd $WORKSPACE/packages/$TARGET
 export GOPATH=$(mktemp -d)
-go get github.com/kardianos/govendor
 package_go_binary cmd/arvados-client arvados-client \
     "Arvados command line tool (beta)"
 package_go_binary cmd/arvados-server arvados-server \
@@ -290,15 +288,13 @@ package_go_binary cmd/arvados-server arvados-controller \
     "Arvados cluster controller daemon"
 package_go_binary cmd/arvados-server arvados-dispatch-cloud \
     "Arvados cluster cloud dispatch"
-package_go_binary sdk/go/crunchrunner crunchrunner \
-    "Crunchrunner executes a command inside a container and uploads the output"
 package_go_binary services/arv-git-httpd arvados-git-httpd \
     "Provide authenticated http access to Arvados-hosted git repositories"
 package_go_binary services/crunch-dispatch-local crunch-dispatch-local \
     "Dispatch Crunch containers on the local system"
 package_go_binary services/crunch-dispatch-slurm crunch-dispatch-slurm \
     "Dispatch Crunch containers to a SLURM cluster"
-package_go_binary services/crunch-run crunch-run \
+package_go_binary cmd/arvados-server crunch-run \
     "Supervise a single Crunch container"
 package_go_binary services/crunchstat crunchstat \
     "Gather cpu/memory/network statistics of running Crunch jobs"
@@ -323,12 +319,14 @@ package_go_binary tools/keep-rsync keep-rsync \
 package_go_binary tools/keep-exercise keep-exercise \
     "Performance testing tool for Arvados Keep"
 
-# The Python SDK
+# The Python SDK - Should be built first because it's needed by others
 fpm_build_virtualenv "arvados-python-client" "sdk/python"
+
+# The Python SDK - Python3 package
 fpm_build_virtualenv "arvados-python-client" "sdk/python" "python3"
 
-# Arvados cwl runner
-fpm_build_virtualenv "arvados-cwl-runner" "sdk/cwl"
+# Arvados cwl runner - Only supports Python3 now
+fpm_build_virtualenv "arvados-cwl-runner" "sdk/cwl" "python3"
 
 # The PAM module
 fpm_build_virtualenv "libpam-arvados" "sdk/pam"
@@ -339,11 +337,27 @@ fpm_build_virtualenv "arvados-fuse" "services/fuse"
 # The node manager
 fpm_build_virtualenv "arvados-node-manager" "services/nodemanager"
 
+# The Arvados crunchstat-summary tool
+fpm_build_virtualenv "crunchstat-summary" "tools/crunchstat-summary"
+
 # The Docker image cleaner
 fpm_build_virtualenv "arvados-docker-cleaner" "services/dockercleaner" "python3"
 
-# The Arvados crunchstat-summary tool
-fpm_build_virtualenv "crunchstat-summary" "tools/crunchstat-summary"
+# The cwltest package, which lives out of tree
+cd "$WORKSPACE"
+if [[ -e "$WORKSPACE/cwltest" ]]; then
+	rm -rf "$WORKSPACE/cwltest"
+fi
+git clone https://github.com/common-workflow-language/cwltest.git
+# last release to support python 2.7
+(cd cwltest && git checkout 1.0.20190906212748)
+# signal to our build script that we want a cwltest executable installed in /usr/bin/
+mkdir cwltest/bin && touch cwltest/bin/cwltest
+fpm_build_virtualenv "cwltest" "cwltest"
+rm -rf "$WORKSPACE/cwltest"
+
+calculate_go_package_version arvados_server_version cmd/arvados-server
+arvados_server_iteration=$(default_iteration "arvados-server" "$arvados_server_version" "go")
 
 # Build the API server package
 test_rails_package_presence arvados-api-server "$WORKSPACE/services/api"
@@ -351,7 +365,7 @@ if [[ "$?" == "0" ]]; then
   handle_rails_package arvados-api-server "$WORKSPACE/services/api" \
       "$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
       --description="Arvados API server - Arvados is a free and open source platform for big data science." \
-      --license="GNU Affero General Public License, version 3.0"
+      --license="GNU Affero General Public License, version 3.0" --depends "arvados-server = ${arvados_server_version}-${arvados_server_iteration}"
 fi
 
 # Build the workbench server package
@@ -359,6 +373,22 @@ test_rails_package_presence arvados-workbench "$WORKSPACE/apps/workbench"
 if [[ "$?" == "0" ]] ; then
   (
       set -e
+
+      # The workbench package has a build-time dependency on the arvados-server
+      # package for config manipulation, so install it first.
+      cd $WORKSPACE/cmd/arvados-server
+      get_complete_package_name arvados_server_pkgname arvados-server ${arvados_server_version} go
+
+      arvados_server_pkg_path="$WORKSPACE/packages/$TARGET/${arvados_server_pkgname}"
+      if [[ ! -e ${arvados_server_pkg_path} ]]; then
+        arvados_server_pkg_path="$WORKSPACE/packages/$TARGET/processed/${arvados_server_pkgname}"
+      fi
+      if [[ "$FORMAT" == "deb" ]]; then
+        dpkg -i ${arvados_server_pkg_path}
+      else
+        rpm -i ${arvados_server_pkg_path}
+      fi
+
       cd "$WORKSPACE/apps/workbench"
 
       # We need to bundle to be ready even when we build a package without vendor directory
@@ -371,17 +401,17 @@ if [[ "$?" == "0" ]] ; then
       rm -rf tmp
       mkdir tmp
 
-      # Set up application.yml and production.rb so that asset precompilation works
-      \cp config/application.yml.example config/application.yml -f
-      \cp config/environments/production.rb.example config/environments/production.rb -f
-      sed -i 's/secret_token: ~/secret_token: xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx/' config/application.yml
-      sed -i 's/keep_web_url: false/keep_web_url: exampledotcom/' config/application.yml
+      # Set up an appropriate config.yml
+      arvados-server config-dump -config <(cat /etc/arvados/config.yml 2>/dev/null || echo  "Clusters: {zzzzz: {}}") > /tmp/x
+      mkdir -p /etc/arvados/
+      mv /tmp/x /etc/arvados/config.yml
+      perl -p -i -e 'BEGIN{undef $/;} s/WebDAV(.*?):\n( *)ExternalURL: ""/WebDAV$1:\n$2ExternalURL: "example.com"/g' /etc/arvados/config.yml
 
-      RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake npm:install >/dev/null
-      RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake assets:precompile >/dev/null
+      RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake npm:install >"$STDOUT_IF_DEBUG"
+      RAILS_ENV=production RAILS_GROUPS=assets bundle exec rake assets:precompile >"$STDOUT_IF_DEBUG"
 
       # Remove generated configuration files so they don't go in the package.
-      rm config/application.yml config/environments/production.rb
+      rm -rf /etc/arvados/
   )
 
   if [[ "$?" != "0" ]]; then
@@ -391,7 +421,7 @@ if [[ "$?" == "0" ]] ; then
     handle_rails_package arvados-workbench "$WORKSPACE/apps/workbench" \
         "$WORKSPACE/agpl-3.0.txt" --url="https://arvados.org" \
         --description="Arvados Workbench - Arvados is a free and open source platform for big data science." \
-        --license="GNU Affero General Public License, version 3.0"
+        --license="GNU Affero General Public License, version 3.0" --depends "arvados-server = ${arvados_server_version}-${arvados_server_iteration}"
   fi
 fi