X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/c980683a243903babe9cc09cabc71e1c6229fef1..02010431f52911a6ff908e673c534291beb929ac:/sdk/cwl/tests/test_submit.py

diff --git a/sdk/cwl/tests/test_submit.py b/sdk/cwl/tests/test_submit.py
index d383a48e94..c195b03916 100644
--- a/sdk/cwl/tests/test_submit.py
+++ b/sdk/cwl/tests/test_submit.py
@@ -1,58 +1,562 @@
-import unittest
+import copy
+import cStringIO
+import functools
+import hashlib
+import json
+import logging
 import mock
-import arvados_cwl
 import sys
+import unittest
+
 import arvados
-import arvados.keep
 import arvados.collection
-import hashlib
+import arvados_cwl
+import arvados_cwl.runner
+import arvados.keep
 
-class TestSubmit(unittest.TestCase):
+from .matcher import JsonDiffMatcher
+from .mock_discovery import get_rootDesc
+
+_rootDesc = None
+
+def stubs(func):
+    @functools.wraps(func)
     @mock.patch("arvados.commands.keepdocker.list_images_in_arv")
     @mock.patch("arvados.collection.KeepClient")
+    @mock.patch("arvados.keep.KeepClient")
     @mock.patch("arvados.events.subscribe")
-    def test_submit(self, events, keep, keepdocker):
-        api = mock.MagicMock()
+    def wrapped(self, events, keep_client1, keep_client2, keepdocker, *args, **kwargs):
+        class Stubs:
+            pass
+        stubs = Stubs()
+        stubs.events = events
+        stubs.keepdocker = keepdocker
+
+
         def putstub(p, **kwargs):
             return "%s+%i" % (hashlib.md5(p).hexdigest(), len(p))
-        keep().put.side_effect = putstub
-        keepdocker.return_value = True
-        api.users().current().execute.return_value = {"uuid": "zzzzz-tpzed-zzzzzzzzzzzzzzz"}
-        api.collections().list().execute.return_value = {"items": []}
-        api.collections().create().execute.side_effect = ({"uuid": "zzzzz-4zz18-zzzzzzzzzzzzzz1",
-                                                           "portable_data_hash": "99999999999999999999999999999991+99"},
-                                                          {"uuid": "zzzzz-4zz18-zzzzzzzzzzzzzz2",
-                                                           "portable_data_hash": "99999999999999999999999999999992+99"})
-        api.jobs().create().execute.return_value = {"uuid": "zzzzz-8i9sb-zzzzzzzzzzzzzzz", "state": "Queued"}
-
-        arvados_cwl.main(["--debug", "--submit", "--no-wait", "tests/wf/submit_wf.cwl", "tests/submit_test_job.json"],
-                         sys.stdout, sys.stderr, api_client=api)
-
-        api.collections().create.assert_has_calls([
-            mock.call(),
-            mock.call(body={'manifest_text': './tool b0fa9cffda3d37ba401bc338bb0b54a6+257 0:16:blub.txt 16:241:submit_tool.cwl\n./wf 888e237b758adf86ca66c36f7bd88a24+175 0:175:submit_wf.cwl\n',
-                                                                   'owner_uuid': 'zzzzz-tpzed-zzzzzzzzzzzzzzz',
-                                                                   'name': 'submit_wf.cwl'
-                                                               }, ensure_unique_name=True),
-                                                   mock.call().execute(),
-                                                   mock.call(body={'manifest_text': '. 979af1245a12a1fed634d4222473bfdc+16 0:16:blorp.txt\n',
-                                                                  'owner_uuid': 'zzzzz-tpzed-zzzzzzzzzzzzzzz',
-                                                                  'name': 'submit_test_job.json'
-                                                               }, ensure_unique_name=True),
-                                                   mock.call().execute()])
-        api.jobs().create.assert_called_with(body={
+        keep_client1().put.side_effect = putstub
+        keep_client1.put.side_effect = putstub
+        keep_client2().put.side_effect = putstub
+        keep_client2.put.side_effect = putstub
+
+        stubs.keep_client = keep_client2
+        stubs.keepdocker.return_value = [("zzzzz-4zz18-zzzzzzzzzzzzzz3", "")]
+        stubs.fake_user_uuid = "zzzzz-tpzed-zzzzzzzzzzzzzzz"
+
+        stubs.api = mock.MagicMock()
+        stubs.api._rootDesc = get_rootDesc()
+
+        stubs.api.users().current().execute.return_value = {
+            "uuid": stubs.fake_user_uuid,
+        }
+        stubs.api.collections().list().execute.return_value = {"items": []}
+        stubs.api.collections().create().execute.side_effect = ({
+            "uuid": "zzzzz-4zz18-zzzzzzzzzzzzzz1",
+            "portable_data_hash": "99999999999999999999999999999991+99",
+            "manifest_text": ""
+        }, {
+            "uuid": "zzzzz-4zz18-zzzzzzzzzzzzzz2",
+            "portable_data_hash": "99999999999999999999999999999992+99",
+            "manifest_text": "./tool 00000000000000000000000000000000+0 0:0:submit_tool.cwl 0:0:blub.txt"
+        },
+        {
+            "uuid": "zzzzz-4zz18-zzzzzzzzzzzzzz4",
+            "portable_data_hash": "99999999999999999999999999999994+99",
+            "manifest_text": ""
+        },
+        {
+            "uuid": "zzzzz-4zz18-zzzzzzzzzzzzzz5",
+            "portable_data_hash": "99999999999999999999999999999995+99",
+            "manifest_text": ""
+        },
+        {
+            "uuid": "zzzzz-4zz18-zzzzzzzzzzzzzz6",
+            "portable_data_hash": "99999999999999999999999999999996+99",
+            "manifest_text": ""
+        }
+        )
+        stubs.api.collections().get().execute.return_value = {
+            "portable_data_hash": "99999999999999999999999999999993+99", "manifest_text": "./tool 00000000000000000000000000000000+0 0:0:submit_tool.cwl 0:0:blub.txt"}
+
+        stubs.expect_job_uuid = "zzzzz-8i9sb-zzzzzzzzzzzzzzz"
+        stubs.api.jobs().create().execute.return_value = {
+            "uuid": stubs.expect_job_uuid,
+            "state": "Queued",
+        }
+
+        stubs.expect_container_request_uuid = "zzzzz-xvhdp-zzzzzzzzzzzzzzz"
+        stubs.api.container_requests().create().execute.return_value = {
+            "uuid": stubs.expect_container_request_uuid,
+            "container_uuid": "zzzzz-dz642-zzzzzzzzzzzzzzz",
+            "state": "Queued"
+        }
+
+        stubs.expect_pipeline_template_uuid = "zzzzz-d1hrv-zzzzzzzzzzzzzzz"
+        stubs.api.pipeline_templates().create().execute.return_value = {
+            "uuid": stubs.expect_pipeline_template_uuid,
+        }
+        stubs.expect_job_spec = {
             'runtime_constraints': {
-                'docker_image': 'arvados/jobs'
+                'docker_image': 'arvados/jobs:'+arvados_cwl.__version__
             },
             'script_parameters': {
                 'x': {
-                    'path': '99999999999999999999999999999992+99/blorp.txt',
+                    'basename': 'blorp.txt',
+                    'location': 'keep:99999999999999999999999999999994+99/blorp.txt',
                     'class': 'File'
                 },
-                'cwl:tool': '99999999999999999999999999999991+99/wf/submit_wf.cwl'
+                'y': {
+                    'basename': '99999999999999999999999999999998+99',
+                    'location': 'keep:99999999999999999999999999999998+99',
+                    'class': 'Directory'
+                },
+                'z': {
+                    'basename': 'anonymous',
+                    "listing": [{
+                        "basename": "renamed.txt",
+                        "class": "File",
+                        "location": "keep:99999999999999999999999999999998+99/file1.txt"
+                    }],
+                    'class': 'Directory'
+                },
+                'cwl:tool':
+                '99999999999999999999999999999991+99/wf/submit_wf.cwl'
             },
             'repository': 'arvados',
-            'script_version': 'master',
+            'script_version': arvados_cwl.__version__,
             'script': 'cwl-runner'
+        }
+        stubs.pipeline_component = stubs.expect_job_spec.copy()
+        stubs.expect_pipeline_instance = {
+            'name': 'submit_wf.cwl',
+            'state': 'RunningOnServer',
+            "components": {
+                "cwl-runner": {
+                    'runtime_constraints': {'docker_image': 'arvados/jobs:'+arvados_cwl.__version__},
+                    'script_parameters': {
+                        'y': {"value": {'basename': '99999999999999999999999999999998+99', 'location': 'keep:99999999999999999999999999999998+99', 'class': 'Directory'}},
+                        'x': {"value": {'basename': 'blorp.txt', 'class': 'File', 'location': 'keep:99999999999999999999999999999994+99/blorp.txt'}},
+                        'z': {"value": {'basename': 'anonymous', 'class': 'Directory',
+                              'listing': [
+                                  {'basename': 'renamed.txt', 'class': 'File', 'location': 'keep:99999999999999999999999999999998+99/file1.txt'}
+                              ]}},
+                        'cwl:tool': '99999999999999999999999999999991+99/wf/submit_wf.cwl',
+                        'arv:enable_reuse': True
+                    },
+                    'repository': 'arvados',
+                    'script_version': arvados_cwl.__version__,
+                    'script': 'cwl-runner',
+                    'job': {'state': 'Queued', 'uuid': 'zzzzz-8i9sb-zzzzzzzzzzzzzzz'}
+                }
+            }
+        }
+        stubs.pipeline_create = copy.deepcopy(stubs.expect_pipeline_instance)
+        stubs.expect_pipeline_uuid = "zzzzz-d1hrv-zzzzzzzzzzzzzzz"
+        stubs.pipeline_create["uuid"] = stubs.expect_pipeline_uuid
+        stubs.pipeline_with_job = copy.deepcopy(stubs.pipeline_create)
+        stubs.pipeline_with_job["components"]["cwl-runner"]["job"] = {
+            "uuid": "zzzzz-8i9sb-zzzzzzzzzzzzzzz",
+            "state": "Queued"
+        }
+        stubs.api.pipeline_instances().create().execute.return_value = stubs.pipeline_create
+        stubs.api.pipeline_instances().get().execute.return_value = stubs.pipeline_with_job
+
+        stubs.expect_container_spec = {
+            'priority': 1,
+            'mounts': {
+                '/var/spool/cwl': {
+                    'writable': True,
+                    'kind': 'collection'
+                },
+                '/var/lib/cwl/workflow': {
+                    'portable_data_hash': '99999999999999999999999999999991+99',
+                    'kind': 'collection'
+                },
+                'stdout': {
+                    'path': '/var/spool/cwl/cwl.output.json',
+                    'kind': 'file'
+                },
+                '/var/lib/cwl/job/cwl.input.json': {
+                    'portable_data_hash': 'd20d7cddd1984f105dd3702c7f125afb+60/cwl.input.json',
+                    'kind': 'collection'
+                }
+            },
+            'state': 'Committed',
+            'owner_uuid': 'zzzzz-tpzed-zzzzzzzzzzzzzzz',
+            'command': ['arvados-cwl-runner', '--local', '--api=containers', '--enable-reuse', '/var/lib/cwl/workflow/submit_wf.cwl', '/var/lib/cwl/job/cwl.input.json'],
+            'name': 'submit_wf.cwl',
+            'container_image': 'arvados/jobs:'+arvados_cwl.__version__,
+            'output_path': '/var/spool/cwl',
+            'cwd': '/var/spool/cwl',
+            'runtime_constraints': {
+                'API': True,
+                'vcpus': 1,
+                'ram': 268435456
+            }
+        }
+
+        stubs.expect_workflow_uuid = "zzzzz-7fd4e-zzzzzzzzzzzzzzz"
+        stubs.api.workflows().create().execute.return_value = {
+            "uuid": stubs.expect_workflow_uuid,
+        }
+
+        return func(self, stubs, *args, **kwargs)
+    return wrapped
+
+
+class TestSubmit(unittest.TestCase):
+    @mock.patch("time.sleep")
+    @stubs
+    def test_submit(self, stubs, tm):
+        capture_stdout = cStringIO.StringIO()
+        exited = arvados_cwl.main(
+            ["--submit", "--no-wait", "--debug",
+             "tests/wf/submit_wf.cwl", "tests/submit_test_job.json"],
+            capture_stdout, sys.stderr, api_client=stubs.api)
+        self.assertEqual(exited, 0)
+
+        stubs.api.collections().create.assert_has_calls([
+            mock.call(),
+            mock.call(body={
+                'manifest_text':
+                './tool d51232d96b6116d964a69bfb7e0c73bf+450 '
+                '0:16:blub.txt 16:434:submit_tool.cwl\n./wf '
+                'cc2ffb940e60adf1b2b282c67587e43d+413 0:413:submit_wf.cwl\n',
+                'owner_uuid': 'zzzzz-tpzed-zzzzzzzzzzzzzzz',
+                'name': 'submit_wf.cwl',
+            }, ensure_unique_name=True),
+            mock.call().execute(),
+            mock.call(body={'manifest_text': '. d41d8cd98f00b204e9800998ecf8427e+0 '
+                            '0:0:blub.txt 0:0:submit_tool.cwl\n',
+                            'owner_uuid': 'zzzzz-tpzed-zzzzzzzzzzzzzzz',
+                            'replication_desired': None,
+                            'name': 'New collection'
+            }, ensure_unique_name=True),
+            mock.call().execute(num_retries=4),
+            mock.call(body={
+                'manifest_text':
+                '. 979af1245a12a1fed634d4222473bfdc+16 0:16:blorp.txt\n',
+                'owner_uuid': 'zzzzz-tpzed-zzzzzzzzzzzzzzz',
+                'name': '#',
+            }, ensure_unique_name=True),
+            mock.call().execute()])
+
+        expect_pipeline = copy.deepcopy(stubs.expect_pipeline_instance)
+        expect_pipeline["owner_uuid"] = stubs.fake_user_uuid
+        stubs.api.pipeline_instances().create.assert_called_with(
+            body=expect_pipeline)
+        self.assertEqual(capture_stdout.getvalue(),
+                         stubs.expect_pipeline_uuid + '\n')
+
+
+    @mock.patch("time.sleep")
+    @stubs
+    def test_submit_no_reuse(self, stubs, tm):
+        capture_stdout = cStringIO.StringIO()
+        exited = arvados_cwl.main(
+            ["--submit", "--no-wait", "--debug", "--disable-reuse",
+             "tests/wf/submit_wf.cwl", "tests/submit_test_job.json"],
+            capture_stdout, sys.stderr, api_client=stubs.api)
+        self.assertEqual(exited, 0)
+
+        stubs.expect_pipeline_instance["components"]["cwl-runner"]["script_parameters"]["arv:enable_reuse"] = {"value": False}
+
+        expect_pipeline = copy.deepcopy(stubs.expect_pipeline_instance)
+        expect_pipeline["owner_uuid"] = stubs.fake_user_uuid
+        stubs.api.pipeline_instances().create.assert_called_with(
+            body=expect_pipeline)
+        self.assertEqual(capture_stdout.getvalue(),
+                         stubs.expect_pipeline_uuid + '\n')
+
+    @mock.patch("time.sleep")
+    @stubs
+    def test_submit_with_project_uuid(self, stubs, tm):
+        project_uuid = 'zzzzz-j7d0g-zzzzzzzzzzzzzzz'
+
+        exited = arvados_cwl.main(
+            ["--submit", "--no-wait",
+             "--project-uuid", project_uuid,
+             "tests/wf/submit_wf.cwl", "tests/submit_test_job.json"],
+            sys.stdout, sys.stderr, api_client=stubs.api)
+        self.assertEqual(exited, 0)
+
+        expect_pipeline = copy.deepcopy(stubs.expect_pipeline_instance)
+        expect_pipeline["owner_uuid"] = project_uuid
+        stubs.api.pipeline_instances().create.assert_called_with(
+            body=expect_pipeline)
+
+    @stubs
+    def test_submit_container(self, stubs):
+        capture_stdout = cStringIO.StringIO()
+        try:
+            exited = arvados_cwl.main(
+                ["--submit", "--no-wait", "--api=containers", "--debug",
+                 "tests/wf/submit_wf.cwl", "tests/submit_test_job.json"],
+                capture_stdout, sys.stderr, api_client=stubs.api, keep_client=stubs.keep_client)
+            self.assertEqual(exited, 0)
+        except:
+            logging.exception("")
+
+        stubs.api.collections().create.assert_has_calls([
+            mock.call(),
+            mock.call(body={
+                'manifest_text':
+                './tool d51232d96b6116d964a69bfb7e0c73bf+450 '
+                '0:16:blub.txt 16:434:submit_tool.cwl\n./wf '
+                'cc2ffb940e60adf1b2b282c67587e43d+413 0:413:submit_wf.cwl\n',
+                'owner_uuid': 'zzzzz-tpzed-zzzzzzzzzzzzzzz',
+                'name': 'submit_wf.cwl',
+            }, ensure_unique_name=True),
+            mock.call().execute(),
+            mock.call(body={'manifest_text': '. d41d8cd98f00b204e9800998ecf8427e+0 '
+                            '0:0:blub.txt 0:0:submit_tool.cwl\n',
+                            'owner_uuid': 'zzzzz-tpzed-zzzzzzzzzzzzzzz',
+                            'name': 'New collection',
+                            'replication_desired': None,
+            }, ensure_unique_name=True),
+            mock.call().execute(num_retries=4),
+            mock.call(body={
+                'manifest_text':
+                '. 979af1245a12a1fed634d4222473bfdc+16 0:16:blorp.txt\n',
+                'owner_uuid': 'zzzzz-tpzed-zzzzzzzzzzzzzzz',
+                'name': '#',
+            }, ensure_unique_name=True),
+            mock.call().execute()])
+
+        expect_container = copy.deepcopy(stubs.expect_container_spec)
+        expect_container["owner_uuid"] = stubs.fake_user_uuid
+        stubs.api.container_requests().create.assert_called_with(
+            body=expect_container)
+        self.assertEqual(capture_stdout.getvalue(),
+                         stubs.expect_container_request_uuid + '\n')
+
+    @stubs
+    def test_submit_container_no_reuse(self, stubs):
+        capture_stdout = cStringIO.StringIO()
+        try:
+            exited = arvados_cwl.main(
+                ["--submit", "--no-wait", "--api=containers", "--debug", "--disable-reuse",
+                 "tests/wf/submit_wf.cwl", "tests/submit_test_job.json"],
+                capture_stdout, sys.stderr, api_client=stubs.api, keep_client=stubs.keep_client)
+            self.assertEqual(exited, 0)
+        except:
+            logging.exception("")
+
+        stubs.expect_container_spec["command"] = ['arvados-cwl-runner', '--local', '--api=containers', '--disable-reuse', '/var/lib/cwl/workflow/submit_wf.cwl', '/var/lib/cwl/job/cwl.input.json']
+
+        expect_container = copy.deepcopy(stubs.expect_container_spec)
+        expect_container["owner_uuid"] = stubs.fake_user_uuid
+        stubs.api.container_requests().create.assert_called_with(
+            body=expect_container)
+        self.assertEqual(capture_stdout.getvalue(),
+                         stubs.expect_container_request_uuid + '\n')
+
+    @mock.patch("arvados.commands.keepdocker.find_one_image_hash")
+    @mock.patch("cwltool.docker.get_image")
+    @mock.patch("arvados.api")
+    def test_arvados_jobs_image(self, api, get_image, find_one_image_hash):
+        arvrunner = mock.MagicMock()
+        arvrunner.project_uuid = ""
+        api.return_value = mock.MagicMock()
+        arvrunner.api = api.return_value
+        arvrunner.api.links().list().execute.side_effect = ({"items": [], "items_available": 0, "offset": 0},
+                                                            {"items": [], "items_available": 0, "offset": 0},
+                                                            {"items": [], "items_available": 0, "offset": 0},
+                                                            {"items": [{"created_at": "",
+                                                                        "head_uuid": "",
+                                                                        "link_class": "docker_image_hash",
+                                                                        "name": "123456",
+                                                                        "owner_uuid": "",
+                                                                        "properties": {"image_timestamp": ""}}], "items_available": 1, "offset": 0},
+                                                            {"items": [], "items_available": 0, "offset": 0},
+                                                            {"items": [{"created_at": "",
+                                                                        "head_uuid": "",
+                                                                        "link_class": "docker_image_repo+tag",
+                                                                        "name": "arvados/jobs:"+arvados_cwl.__version__,
+                                                                        "owner_uuid": "",
+                                                                        "properties": {"image_timestamp": ""}}], "items_available": 1, "offset": 0},
+                                                            {"items": [{"created_at": "",
+                                                                        "head_uuid": "",
+                                                                        "link_class": "docker_image_hash",
+                                                                        "name": "123456",
+                                                                        "owner_uuid": "",
+                                                                        "properties": {"image_timestamp": ""}}], "items_available": 1, "offset": 0}                                                            ,
+        )
+        find_one_image_hash.return_value = "123456"
+
+        arvrunner.api.collections().list().execute.side_effect = ({"items": [], "items_available": 0, "offset": 0},
+                                                                  {"items": [{"uuid": "",
+                                                                              "owner_uuid": "",
+                                                                              "manifest_text": "",
+                                                                              "properties": ""
+                                                                          }], "items_available": 1, "offset": 0},
+                                                                  {"items": [{"uuid": ""}], "items_available": 1, "offset": 0})
+        arvrunner.api.collections().create().execute.return_value = {"uuid": ""}
+        self.assertEqual("arvados/jobs:"+arvados_cwl.__version__, arvados_cwl.runner.arvados_jobs_image(arvrunner))
+
+class TestCreateTemplate(unittest.TestCase):
+    @stubs
+    def test_create(self, stubs):
+        project_uuid = 'zzzzz-j7d0g-zzzzzzzzzzzzzzz'
+
+        capture_stdout = cStringIO.StringIO()
+
+        exited = arvados_cwl.main(
+            ["--create-template", "--debug",
+             "--project-uuid", project_uuid,
+             "tests/wf/submit_wf.cwl", "tests/submit_test_job.json"],
+            capture_stdout, sys.stderr, api_client=stubs.api)
+        self.assertEqual(exited, 0)
+
+        stubs.api.pipeline_instances().create.refute_called()
+        stubs.api.jobs().create.refute_called()
+
+        expect_component = copy.deepcopy(stubs.expect_job_spec)
+        expect_component['script_parameters']['x'] = {
+            'dataclass': 'File',
+            'required': True,
+            'type': 'File',
+            'value': '99999999999999999999999999999994+99/blorp.txt',
+        }
+        expect_component['script_parameters']['y'] = {
+            'dataclass': 'Collection',
+            'required': True,
+            'type': 'Directory',
+            'value': '99999999999999999999999999999998+99',
+        }
+        expect_component['script_parameters']['z'] = {
+            'dataclass': 'Collection',
+            'required': True,
+            'type': 'Directory',
+        }
+        expect_template = {
+            "components": {
+                "submit_wf.cwl": expect_component,
+            },
+            "name": "submit_wf.cwl",
+            "owner_uuid": project_uuid,
+        }
+        stubs.api.pipeline_templates().create.assert_called_with(
+            body=JsonDiffMatcher(expect_template), ensure_unique_name=True)
+
+        self.assertEqual(capture_stdout.getvalue(),
+                         stubs.expect_pipeline_template_uuid + '\n')
+
+
+class TestCreateWorkflow(unittest.TestCase):
+    @stubs
+    def test_create(self, stubs):
+        project_uuid = 'zzzzz-j7d0g-zzzzzzzzzzzzzzz'
+
+        capture_stdout = cStringIO.StringIO()
+
+        exited = arvados_cwl.main(
+            ["--create-workflow", "--debug",
+             "--project-uuid", project_uuid,
+             "tests/wf/submit_wf.cwl", "tests/submit_test_job.json"],
+            capture_stdout, sys.stderr, api_client=stubs.api)
+        self.assertEqual(exited, 0)
+
+        stubs.api.pipeline_templates().create.refute_called()
+        stubs.api.container_requests().create.refute_called()
+
+        with open("tests/wf/expect_packed.cwl") as f:
+            expect_workflow = f.read()
+
+        body = {
+            "workflow": {
+                "owner_uuid": project_uuid,
+                "name": "submit_wf.cwl",
+                "description": "",
+                "definition": expect_workflow
+                }
+        }
+        stubs.api.workflows().create.assert_called_with(
+            body=JsonDiffMatcher(body))
+
+        self.assertEqual(capture_stdout.getvalue(),
+                         stubs.expect_workflow_uuid + '\n')
+
+
+class TestTemplateInputs(unittest.TestCase):
+    expect_template = {
+        "components": {
+            "inputs_test.cwl": {
+                'runtime_constraints': {
+                    'docker_image': 'arvados/jobs:'+arvados_cwl.__version__,
+                },
+                'script_parameters': {
+                    'cwl:tool':
+                    '99999999999999999999999999999991+99/'
+                    'wf/inputs_test.cwl',
+                    'optionalFloatInput': None,
+                    'fileInput': {
+                        'type': 'File',
+                        'dataclass': 'File',
+                        'required': True,
+                        'title': "It's a file; we expect to find some characters in it.",
+                        'description': 'If there were anything further to say, it would be said here,\nor here.'
+                    },
+                    'floatInput': {
+                        'type': 'float',
+                        'dataclass': 'number',
+                        'required': True,
+                        'title': 'Floats like a duck',
+                        'default': 0.1,
+                        'value': 0.1,
+                    },
+                    'optionalFloatInput': {
+                        'type': ['null', 'float'],
+                        'dataclass': 'number',
+                        'required': False,
+                    },
+                    'boolInput': {
+                        'type': 'boolean',
+                        'dataclass': 'boolean',
+                        'required': True,
+                        'title': 'True or false?',
+                    },
+                },
+                'repository': 'arvados',
+                'script_version': arvados_cwl.__version__,
+                'script': 'cwl-runner',
+            },
         },
-                                             find_or_create=True)
+        "name": "inputs_test.cwl",
+    }
+
+    @stubs
+    def test_inputs_empty(self, stubs):
+        exited = arvados_cwl.main(
+            ["--create-template", "--no-wait",
+             "tests/wf/inputs_test.cwl", "tests/order/empty_order.json"],
+            cStringIO.StringIO(), sys.stderr, api_client=stubs.api)
+        self.assertEqual(exited, 0)
+
+        expect_template = copy.deepcopy(self.expect_template)
+        expect_template["owner_uuid"] = stubs.fake_user_uuid
+
+        stubs.api.pipeline_templates().create.assert_called_with(
+            body=JsonDiffMatcher(expect_template), ensure_unique_name=True)
+
+    @stubs
+    def test_inputs(self, stubs):
+        exited = arvados_cwl.main(
+            ["--create-template", "--no-wait",
+             "tests/wf/inputs_test.cwl", "tests/order/inputs_test_order.json"],
+            cStringIO.StringIO(), sys.stderr, api_client=stubs.api)
+        self.assertEqual(exited, 0)
+
+        self.expect_template["owner_uuid"] = stubs.fake_user_uuid
+
+        expect_template = copy.deepcopy(self.expect_template)
+        expect_template["owner_uuid"] = stubs.fake_user_uuid
+        params = expect_template[
+            "components"]["inputs_test.cwl"]["script_parameters"]
+        params["fileInput"]["value"] = '99999999999999999999999999999994+99/blorp.txt'
+        params["floatInput"]["value"] = 1.234
+        params["boolInput"]["value"] = True
+
+        stubs.api.pipeline_templates().create.assert_called_with(
+            body=JsonDiffMatcher(expect_template), ensure_unique_name=True)