X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/c41beef3142e9c3e15385b2ad76c2a0088ca6a20..35336cd73e444534cb2eda20e3730464cc4e6553:/apps/workbench/app/helpers/provenance_helper.rb diff --git a/apps/workbench/app/helpers/provenance_helper.rb b/apps/workbench/app/helpers/provenance_helper.rb index 6d6ae5516c..66754d20b2 100644 --- a/apps/workbench/app/helpers/provenance_helper.rb +++ b/apps/workbench/app/helpers/provenance_helper.rb @@ -7,13 +7,15 @@ module ProvenanceHelper @visited = {} @jobs = {} end - + def self.collection_uuid(uuid) - m = /^([a-f0-9]{32}(\+[0-9]+)?)(\+.*)?$/.match(uuid.to_s) + m = CollectionsHelper.match(uuid) if m - #if m[2] - return m[1] - #else + if m[2] + return m[1]+m[2] + else + return m[1] + end # Collection.where(uuid: ['contains', m[1]]).each do |u| # puts "fixup #{uuid} to #{u.uuid}" # return u.uuid @@ -24,17 +26,28 @@ module ProvenanceHelper end end + def url_for u + p = { :host => @opts[:request].host, + :port => @opts[:request].port, + :protocol => @opts[:request].protocol } + p.merge! u + Rails.application.routes.url_helpers.url_for (p) + end + def determine_fillcolor(n) fillcolor = %w(aaaaaa aaffaa aaaaff aaaaaa ffaaaa)[n || 0] || 'aaaaaa' "style=filled,fillcolor=\"##{fillcolor}\"" end def describe_node(uuid) + uuid = uuid.to_sym bgcolor = determine_fillcolor @opts[:pips][uuid] if @opts[:pips] rsc = ArvadosBase::resource_class_for_uuid uuid.to_s if rsc - href = "/#{rsc.to_s.underscore.pluralize rsc}/#{uuid}" + href = url_for ({:controller => rsc.to_s.tableize, + :action => :show, + :id => uuid.to_s }) #"\"#{uuid}\" [label=\"#{rsc}\\n#{uuid}\",href=\"#{href}\"];\n" if rsc == Collection @@ -44,11 +57,12 @@ module ProvenanceHelper #puts "empty!" return "\"#{uuid}\" [label=\"(empty collection)\"];\n" end + puts "#{uuid.class} #{@pdata[uuid]}" if @pdata[uuid] #puts @pdata[uuid] if @pdata[uuid][:name] return "\"#{uuid}\" [label=\"#{@pdata[uuid][:name]}\",href=\"#{href}\",shape=oval,#{bgcolor}];\n" - else + else files = nil if @pdata[uuid].respond_to? :files files = @pdata[uuid].files @@ -67,12 +81,13 @@ module ProvenanceHelper if i < files.length label += "\\n⋮" end + #puts "#{uuid} #{label} #{files}" return "\"#{uuid}\" [label=\"#{label}\",href=\"#{href}\",shape=oval,#{bgcolor}];\n" end end end - return "\"#{uuid}\" [label=\"#{rsc}\",href=\"#{href}\",#{bgcolor}];\n" end + return "\"#{uuid}\" [label=\"#{rsc}\",href=\"#{href}\",#{bgcolor}];\n" end "\"#{uuid}\" [#{bgcolor}];\n" end @@ -99,7 +114,7 @@ module ProvenanceHelper gr = "\"#{head}\" -> \"#{tail}\"" end if extra.length > 0 - gr += "[" + gr += " [" extra.each do |k, v| gr += "#{k}=\"#{v}\"," end @@ -209,6 +224,8 @@ module ProvenanceHelper gr += edge(job_uuid(job), job[:script_version], {:label => "script_version"}) end end + elsif rsc == Link + # do nothing else gr += describe_node(uuid) end @@ -216,8 +233,12 @@ module ProvenanceHelper @pdata.each do |k, link| if link[:head_uuid] == uuid.to_s and link[:link_class] == "provenance" + href = url_for ({:controller => Link.to_s.tableize, + :action => :show, + :id => link[:uuid] }) + gr += describe_node(link[:tail_uuid]) - gr += edge(link[:head_uuid], link[:tail_uuid], {:label => link[:name], :href => "/links/#{link[:uuid]}"}) + gr += edge(link[:head_uuid], link[:tail_uuid], {:label => link[:name], :href => href}) gr += generate_provenance_edges(link[:tail_uuid]) end end @@ -230,7 +251,10 @@ module ProvenanceHelper def describe_jobs gr = "" @jobs.each do |k, v| - gr += "\"#{k}\" [href=\"/jobs?" + href = url_for ({:controller => Job.to_s.tableize, + :action => :index }) + + gr += "\"#{k}\" [href=\"#{href}?" n = 0 v.each do |u| @@ -241,11 +265,11 @@ module ProvenanceHelper gr += "\",label=\"" if @opts[:combine_jobs] == :script_only - gr += uuid = "#{v[0][:script]}" + gr += "#{v[0][:script]}" elsif @opts[:combine_jobs] == :script_and_version - gr += uuid = "#{v[0][:script]}" + gr += "#{v[0][:script]}" # Just show the name but the nodes will be distinct else - gr += uuid = "#{v[0][:script]}\\n#{v[0][:finished_at]}" + gr += "#{v[0][:script]}\\n#{v[0][:finished_at]}" end gr += "\",#{determine_fillcolor n}];\n" end @@ -289,8 +313,8 @@ edge [fontsize=10]; gr += "}" svg = "" - #puts gr - + puts gr + require 'open3' Open3.popen2("dot", "-Tsvg") do |stdin, stdout, wait_thr|