X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/b9d2799dfebae724dda3b3e28641116ca5daf5c7..82fa37ac01169178f6a9b1c142926de7b50e8841:/sdk/cwl/tests/test_make_output.py diff --git a/sdk/cwl/tests/test_make_output.py b/sdk/cwl/tests/test_make_output.py index 2671297154..3228ad77b3 100644 --- a/sdk/cwl/tests/test_make_output.py +++ b/sdk/cwl/tests/test_make_output.py @@ -1,20 +1,25 @@ +import functools +import json import logging import mock -import unittest import os -import functools -import json import StringIO +import unittest +import arvados import arvados_cwl +from .mock_discovery import get_rootDesc class TestMakeOutput(unittest.TestCase): + def setUp(self): + self.api = mock.MagicMock() + self.api._rootDesc = get_rootDesc() + @mock.patch("arvados.collection.Collection") @mock.patch("arvados.collection.CollectionReader") def test_make_output_collection(self, reader, col): - api = mock.MagicMock() keep_client = mock.MagicMock() - runner = arvados_cwl.ArvCwlRunner(api, keep_client=keep_client) + runner = arvados_cwl.ArvCwlRunner(self.api, keep_client=keep_client) runner.project_uuid = 'zzzzz-j7d0g-zzzzzzzzzzzzzzz' final = mock.MagicMock() @@ -27,7 +32,7 @@ class TestMakeOutput(unittest.TestCase): final.open.return_value = openmock openmock.__enter__.return_value = cwlout - runner.make_output_collection("Test output", { + _, runner.final_output_collection = runner.make_output_collection("Test output", { "foo": { "class": "File", "location": "keep:99999999999999999999999999999991+99/foo.txt", @@ -37,7 +42,8 @@ class TestMakeOutput(unittest.TestCase): "bar": { "class": "File", "location": "keep:99999999999999999999999999999992+99/bar.txt", - "basename": "baz.txt" + "basename": "baz.txt", + "size": 4 } }) @@ -47,11 +53,13 @@ class TestMakeOutput(unittest.TestCase): self.assertEqual("""{ "bar": { "class": "File", - "location": "baz.txt" + "location": "baz.txt", + "size": 4 }, "foo": { "class": "File", - "location": "foo.txt" + "location": "foo.txt", + "size": 3 } }""", cwlout.getvalue())