X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/ae92d144610446849eb568247a44f02ae985c281..37516bc14fdfe634c78764c15f3a8eb3a09b403c:/sdk/cwl/tests/arvados-tests.sh diff --git a/sdk/cwl/tests/arvados-tests.sh b/sdk/cwl/tests/arvados-tests.sh index 9cb5234cf0..0cf43405ec 100755 --- a/sdk/cwl/tests/arvados-tests.sh +++ b/sdk/cwl/tests/arvados-tests.sh @@ -1,9 +1,14 @@ -#!/bin/sh +#!/bin/bash # Copyright (C) The Arvados Authors. All rights reserved. # # SPDX-License-Identifier: Apache-2.0 +# +# This in an additional integration test suite for Arvados specific +# bugs and features that are not covered by the unit tests or CWL +# conformance tests. +# -set -e +set -ex if ! arv-get d7514270f356df848477718d58308cc4+94 > /dev/null ; then arv-put --portable-data-hash testdir/* @@ -18,6 +23,22 @@ if ! arv-get 20850f01122e860fb878758ac1320877+71 > /dev/null ; then arv-put --portable-data-hash samples/sample1_S01_R1_001.fastq.gz fi +# Use the python executor associated with the installed OS package, if present. +python="$(PATH="/usr/lib/python3-arvados-cwl-runner/bin:/opt/arvados-py/bin:$PATH" command -v python3)" + +# Test for #18888 +# This is a standalone test because the bug was observed with this +# command line and was thought to be due to command line handling. arvados-cwl-runner 18888-download_def.cwl --scripts scripts/ +# Test for #19070 +# The most effective way to test this seemed to be to write an +# integration test to check for the expected behavior. +$python test_copy_deps.py + +# Test for #17004 +# Checks that the final output collection has the expected properties. +$python test_set_output_prop.py + +# Run integration tests exec cwltest --test arvados-tests.yml --tool arvados-cwl-runner $@ -- --disable-reuse --compute-checksum --api=containers