X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/8eeb2671b0a9815345218da335731a31230ada13..112d6ce9132ea6749aef115e3787483958e858fd:/sdk/python/arvados/commands/put.py diff --git a/sdk/python/arvados/commands/put.py b/sdk/python/arvados/commands/put.py index 0645cb49a7..4a926c701c 100644 --- a/sdk/python/arvados/commands/put.py +++ b/sdk/python/arvados/commands/put.py @@ -3,7 +3,6 @@ # TODO: # --md5sum - display md5 of each file as read from disk -import apiclient.errors import argparse import arvados import base64 @@ -18,6 +17,7 @@ import signal import socket import sys import tempfile +from apiclient import errors as apiclient_errors import arvados.commands._util as arv_cmd @@ -145,7 +145,7 @@ Do not continue interrupted uploads from cached state. arg_parser = argparse.ArgumentParser( description='Copy data from the local filesystem to Keep.', - parents=[upload_opts, run_opts]) + parents=[upload_opts, run_opts, arv_cmd.retry_opt]) def parse_arguments(arguments): args = arg_parser.parse_args(arguments) @@ -246,23 +246,26 @@ class ArvPutCollectionWriter(arvados.ResumableCollectionWriter): ['bytes_written', '_seen_inputs']) def __init__(self, cache=None, reporter=None, bytes_expected=None, - api_client=None): + api_client=None, num_retries=0): self.bytes_written = 0 self._seen_inputs = [] self.cache = cache self.reporter = reporter self.bytes_expected = bytes_expected - super(ArvPutCollectionWriter, self).__init__(api_client) + super(ArvPutCollectionWriter, self).__init__( + api_client, num_retries=num_retries) @classmethod - def from_cache(cls, cache, reporter=None, bytes_expected=None): + def from_cache(cls, cache, reporter=None, bytes_expected=None, + num_retries=0): try: state = cache.load() state['_data_buffer'] = [base64.decodestring(state['_data_buffer'])] - writer = cls.from_state(state, cache, reporter, bytes_expected) + writer = cls.from_state(state, cache, reporter, bytes_expected, + num_retries=num_retries) except (TypeError, ValueError, arvados.errors.StaleWriterStateError) as error: - return cls(cache, reporter, bytes_expected) + return cls(cache, reporter, bytes_expected, num_retries=num_retries) else: return writer @@ -348,26 +351,24 @@ def progress_writer(progress_func, outfile=sys.stderr): def exit_signal_handler(sigcode, frame): sys.exit(-sigcode) -def check_project_exists(api_client, project_uuid): - if project_uuid: - if arvados.util.user_uuid_pattern.match(project_uuid): - api_client.users().get(uuid=project_uuid).execute() - return project_uuid - elif arvados.util.group_uuid_pattern.match(project_uuid): - api_client.groups().get(uuid=project_uuid).execute() - return project_uuid - else: - raise Exception("Not a valid project uuid: {}".format(project_uuid)) +def desired_project_uuid(api_client, project_uuid, num_retries): + if not project_uuid: + query = api_client.users().current() + elif arvados.util.user_uuid_pattern.match(project_uuid): + query = api_client.users().get(uuid=project_uuid) + elif arvados.util.group_uuid_pattern.match(project_uuid): + query = api_client.groups().get(uuid=project_uuid) else: - return api_client.users().current().execute()['uuid'] + raise ValueError("Not a valid project UUID: {}".format(project_uuid)) + return query.execute(num_retries=num_retries)['uuid'] def main(arguments=None, stdout=sys.stdout, stderr=sys.stderr): global api_client - if api_client is None: - api_client = arvados.api('v1') - status = 0 args = parse_arguments(arguments) + status = 0 + if api_client is None: + api_client = arvados.api('v1') # Determine the name to use if args.name: @@ -387,9 +388,10 @@ def main(arguments=None, stdout=sys.stdout, stderr=sys.stderr): # Determine the parent project try: - project_uuid = check_project_exists(api_client, args.project_uuid) - except Exception as error: - print >>stderr, "Project {} not found: {}".format(args.project_uuid, error) + project_uuid = desired_project_uuid(api_client, args.project_uuid, + args.retries) + except (apiclient_errors.Error, ValueError) as error: + print >>stderr, error sys.exit(1) if args.progress: @@ -413,10 +415,11 @@ def main(arguments=None, stdout=sys.stdout, stderr=sys.stderr): sys.exit(1) if resume_cache is None: - writer = ArvPutCollectionWriter(resume_cache, reporter, bytes_expected) + writer = ArvPutCollectionWriter(resume_cache, reporter, bytes_expected, + num_retries=args.retries) else: writer = ArvPutCollectionWriter.from_cache( - resume_cache, reporter, bytes_expected) + resume_cache, reporter, bytes_expected, num_retries=args.retries) # Install our signal handler for each code in CAUGHT_SIGNALS, and save # the originals. @@ -456,7 +459,7 @@ def main(arguments=None, stdout=sys.stdout, stderr=sys.stderr): 'manifest_text': writer.manifest_text() }, ensure_unique_name=True - ).execute() + ).execute(num_retries=args.retries) print >>stderr, "Collection saved as '%s'" % collection['name'] @@ -465,9 +468,9 @@ def main(arguments=None, stdout=sys.stdout, stderr=sys.stderr): else: output = collection['uuid'] - except apiclient.errors.Error as error: + except apiclient_errors.Error as error: print >>stderr, ( - "arv-put: Error adding Collection to project: {}.".format( + "arv-put: Error creating Collection on project: {}.".format( error)) status = 1