X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/8d6ffdf2fba938e7fbb5f128664d828d2669bcfe..0561bd0c3c07257fd58ded6c7cfa5feeae97af57:/apps/workbench/app/controllers/work_units_controller.rb diff --git a/apps/workbench/app/controllers/work_units_controller.rb b/apps/workbench/app/controllers/work_units_controller.rb index fe6bff1cee..1e57e7caab 100644 --- a/apps/workbench/app/controllers/work_units_controller.rb +++ b/apps/workbench/app/controllers/work_units_controller.rb @@ -1,3 +1,7 @@ +# Copyright (C) The Arvados Authors. All rights reserved. +# +# SPDX-License-Identifier: AGPL-3.0 + class WorkUnitsController < ApplicationController skip_around_filter :require_thread_api_token, if: proc { |ctrl| Rails.configuration.anonymous_user_token and @@ -14,12 +18,16 @@ class WorkUnitsController < ApplicationController @filters = @filters || [] # get next page of pipeline_instances - filters = @filters + [["uuid", "is_a", ["arvados#pipelineInstance"]]] - pipelines = PipelineInstance.limit(@limit).order(["created_at desc"]).filter(filters) + if PipelineInstance.api_exists?(:index) + filters = @filters + [["uuid", "is_a", ["arvados#pipelineInstance"]]] + pipelines = PipelineInstance.limit(@limit).order(["created_at desc"]).filter(filters) + end # get next page of jobs - filters = @filters + [["uuid", "is_a", ["arvados#job"]]] - jobs = Job.limit(@limit).order(["created_at desc"]).filter(filters) + if Job.api_exists?(:index) + filters = @filters + [["uuid", "is_a", ["arvados#job"]]] + jobs = Job.limit(@limit).order(["created_at desc"]).filter(filters) + end # get next page of container_requests filters = @filters + [["uuid", "is_a", ["arvados#containerRequest"]]] @@ -53,7 +61,7 @@ class WorkUnitsController < ApplicationController workflow = Workflow.find? template_uuid if workflow.definition begin - wf_json = YAML::load(workflow.definition) + wf_json = ActiveSupport::HashWithIndifferentAccess.new YAML::load(workflow.definition) rescue => e logger.error "Error converting definition yaml to json: #{e.message}" raise ArgumentError, "Error converting definition yaml to json: #{e.message}" @@ -73,11 +81,21 @@ class WorkUnitsController < ApplicationController attrs['cwd'] = "/var/spool/cwl" attrs['output_path'] = "/var/spool/cwl" + input_defaults = {} + if wf_json + inputs = get_cwl_inputs(wf_json) + inputs.each do |input| + if input[:default] + input_defaults[cwl_shortname(input[:id])] = input[:default] + end + end + end + # mounts mounts = { "/var/lib/cwl/cwl.input.json" => { "kind" => "json", - "content" => {} + "content" => input_defaults }, "stdout" => { "kind" => "file",