X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/7d4da75d3980d465053c44b4d5b16afe166912a6..c6428570be58b01ce80c257adce06114cea1d88f:/sdk/cwl/arvados_cwl/http.py

diff --git a/sdk/cwl/arvados_cwl/http.py b/sdk/cwl/arvados_cwl/http.py
index ccc2e793b0..33aa098845 100644
--- a/sdk/cwl/arvados_cwl/http.py
+++ b/sdk/cwl/arvados_cwl/http.py
@@ -16,6 +16,7 @@ import arvados.collection
 import urllib.parse
 import logging
 import calendar
+import urllib.parse
 
 logger = logging.getLogger('arvados.cwl-runner')
 
@@ -76,7 +77,9 @@ def changed(url, properties, now):
     remember_headers(url, properties, req.headers, now)
 
     if req.status_code != 200:
-        raise Exception("Got status %s" % req.status_code)
+        # Sometimes endpoints are misconfigured and will deny HEAD but
+        # allow GET so instead of failing here, we'll try GET If-None-Match
+        return True
 
     pr = properties[url]
     if "ETag" in pr and "ETag" in req.headers:
@@ -85,11 +88,21 @@ def changed(url, properties, now):
 
     return True
 
+def etag_quote(etag):
+    # if it already has leading and trailing quotes, do nothing
+    if etag[0] == '"' and etag[-1] == '"':
+        return etag
+    else:
+        # Add quotes.
+        return '"' + etag + '"'
+
 def http_to_keep(api, project_uuid, url, utcnow=datetime.datetime.utcnow):
     r = api.collections().list(filters=[["properties", "exists", url]]).execute()
 
     now = utcnow()
 
+    etags = {}
+
     for item in r["items"]:
         properties = item["properties"]
         if fresh_cache(url, properties, now):
@@ -103,14 +116,27 @@ def http_to_keep(api, project_uuid, url, utcnow=datetime.datetime.utcnow):
             cr = arvados.collection.CollectionReader(item["portable_data_hash"], api_client=api)
             return "keep:%s/%s" % (item["portable_data_hash"], list(cr.keys())[0])
 
+        if "ETag" in properties and len(properties["ETag"]) > 2:
+            etags[properties["ETag"]] = item
+
     properties = {}
-    req = requests.get(url, stream=True, allow_redirects=True)
+    headers = {}
+    if etags:
+        headers['If-None-Match'] = ', '.join([etag_quote(k) for k,v in etags.items()])
+    req = requests.get(url, stream=True, allow_redirects=True, headers=headers)
 
-    if req.status_code != 200:
+    if req.status_code not in (200, 304):
         raise Exception("Failed to download '%s' got status %s " % (url, req.status_code))
 
     remember_headers(url, properties, req.headers, now)
 
+    if req.status_code == 304 and "ETag" in req.headers and req.headers["ETag"] in etags:
+        item = etags[req.headers["ETag"]]
+        item["properties"].update(properties)
+        api.collections().update(uuid=item["uuid"], body={"collection":{"properties": item["properties"]}}).execute()
+        cr = arvados.collection.CollectionReader(item["portable_data_hash"], api_client=api)
+        return "keep:%s/%s" % (item["portable_data_hash"], list(cr.keys())[0])
+
     if "Content-Length" in properties[url]:
         cl = int(properties[url]["Content-Length"])
         logger.info("Downloading %s (%s bytes)", url, cl)
@@ -132,7 +158,7 @@ def http_to_keep(api, project_uuid, url, utcnow=datetime.datetime.utcnow):
     count = 0
     start = time.time()
     checkpoint = start
-    with c.open(name, "w") as f:
+    with c.open(name, "wb") as f:
         for chunk in req.iter_content(chunk_size=1024):
             count += len(chunk)
             f.write(chunk)
@@ -148,7 +174,19 @@ def http_to_keep(api, project_uuid, url, utcnow=datetime.datetime.utcnow):
                     logger.info("%d downloaded, %3.2f MiB/s", count, (bps / (1024*1024)))
                 checkpoint = loopnow
 
-    c.save_new(name="Downloaded from %s" % url, owner_uuid=project_uuid, ensure_unique_name=True)
+    logger.info("Download complete")
+
+    collectionname = "Downloaded from %s" % urllib.parse.quote(url, safe='')
+
+    # max length - space to add a timestamp used by ensure_unique_name
+    max_name_len = 254 - 28
+
+    if len(collectionname) > max_name_len:
+        over = len(collectionname) - max_name_len
+        split = int(max_name_len/2)
+        collectionname = collectionname[0:split] + "…" + collectionname[split+over:]
+
+    c.save_new(name=collectionname, owner_uuid=project_uuid, ensure_unique_name=True)
 
     api.collections().update(uuid=c.manifest_locator(), body={"collection":{"properties": properties}}).execute()