~$ cd ~/.config/arvados
@@ -34,9 +34,9 @@ Now you're ready to copy between *qr1hi* and *dst_cluster*!
h3. How to copy a collection
-First, select the uuid of the collection you want to copy from the source cluster. The uuid can be found inside of a collection in the top left box, or from the URL bar (the part after @collections/...@)
+First, select the uuid of the collection you want to copy from the source cluster. The uuid can be found in the collection display page in the collection summary area (top left box), or from the URL bar (the part after @collections/...@)
-Now copy the collection from *qr1hi* to *dst_cluster*. We will use the uuid @qr1hi-4zz18-tci4vn4fa95w0zx@ as an example. You can find this collection in the lobSTR v.3 project on *qr1hi*.
+Now copy the collection from *qr1hi* to *dst_cluster*. We will use the uuid @qr1hi-4zz18-tci4vn4fa95w0zx@ as an example. You can find this collection in the lobSTR v.3 project on cloud.curoverse.com.
~$ arv-copy --src qr1hi --dst dst_cluster qr1hi-4zz18-tci4vn4fa95w0zx
qr1hi-4zz18-tci4vn4fa95w0zx: 6.1M / 6.1M 100.0%
@@ -44,7 +44,13 @@ arvados.arv-copy[1234] INFO: Success: created copy with uuid dst_cluster-4zz18-8
-The output of arv-copy displays the uuid of the collection generated. By default, the output is placed in your home project in the destination cluster. If you want to place your collection inside of a pre-created project, you can specify the project you want it to be in using the tag @--project-uuid@ followed by the project uuid.
+The output of arv-copy displays the uuid of the collection generated in the destination cluster. By default, the output is placed in your home project in the destination cluster. If you want to place your collection in a pre-created project, you can specify the project you want it to be in using the tag @--project-uuid@ followed by the project uuid.
+
+For example, this will copy the collection to project dst_cluster-j7d0g-a894213ukjhal12 in the destination cluster.
+
+ ~$ arv-copy --src qr1hi --dst dst_cluster --project-uuid dst_cluster-j7d0g-a894213ukjhal12 qr1hi-4zz18-tci4vn4fa95w0zx
+
+
h3. How to copy a pipeline template or pipeline instance
@@ -54,12 +60,21 @@ We will use the uuid @qr1hi-d1hrv-nao0ohw8y7dpf84@ as an example pipeline instan
~$ arv-copy --src qr1hi --dst dst_cluster --dst-git-repo $USER/tutorial qr1hi-d1hrv-nao0ohw8y7dpf84
-To git@git.su92l.arvadosapi.com:bcosc.htslib.git
+To git@git.dst_cluster.arvadosapi.com:$USER/tutorial.git
* [new branch] git_git_qr1hi_arvadosapi_com_arvados_git_ac21f0d45a76294aaca0c0c0fdf06eb72d03368d -> git_git_qr1hi_arvadosapi_com_arvados_git_ac21f0d45a76294aaca0c0c0fdf06eb72d03368d
arvados.arv-copy[19694] INFO: Success: created copy with uuid dst_cluster-d1hrv-rym2h5ub9m8ofwj
-By default, if you copy a pipeline instance recursively, you will find that the template as well as all the dependcies are in your home project.
+New branches in the destination git repo will be created for each branch used in the pipeline template. For example, if your source branch was named ac21f0d45a76294aaca0c0c0fdf06eb72d03368d, your new branch will be named @git_git_qr1hi_arvadosapi_com_reponame_git_ac21f0d45a76294aaca0c0c0fdf06eb72d03368d@.
+
+By default, if you copy a pipeline instance recursively, you will find that the template as well as all the dependencies are in your home project.
-New branches in the destination git repo will be created for each branch used in the pipeline template. For example, if your source branch was named ac21f0d45a76294aaca0c0c0fdf06eb72d03368d, your new branch will be named @git_git_cluster1_arvadosapi_com_reponame_git_ac21f0d45a76294aaca0c0c0fdf06eb72d03368d@.
+If you would like to copy the object without dependencies, you can use the @--no-recursive@ tag.
+
+For example, we can copy the same object using this tag.
+
+
+~$ arv-copy --src qr1hi --dst dst_cluster --dst-git-repo $USER/tutorial --no-recursive qr1hi-d1hrv-nao0ohw8y7dpf84
+
+