X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/78889e115e6fffd5eb82e54a541bd4858f804f91..ead5147bf16393d723ed864eeb3e0d3f24238709:/doc/user/topics/arv-run.html.textile.liquid diff --git a/doc/user/topics/arv-run.html.textile.liquid b/doc/user/topics/arv-run.html.textile.liquid index 93fc2c0f34..9752ca7d2b 100644 --- a/doc/user/topics/arv-run.html.textile.liquid +++ b/doc/user/topics/arv-run.html.textile.liquid @@ -3,6 +3,11 @@ layout: default navsection: userguide title: "Using arv-run" ... +{% comment %} +Copyright (C) The Arvados Authors. All rights reserved. + +SPDX-License-Identifier: CC-BY-SA-3.0 +{% endcomment %} {% include 'crunch1only_begin' %} On those sites, the features described here are not yet implemented. @@ -141,7 +146,7 @@ h2. Additional options * @--docker-image IMG@ : By default, commands run based in a container created from the @default_docker_image_for_jobs@ setting on the API server. Use this option to specify a different image to use. Note: the Docker image must be uploaded to Arvados using @arv keep docker@. * @--dry-run@ : Print out the final Arvados pipeline generated by @arv-run@ without submitting it. * @--local@ : By default, the pipeline will be submitted to your configured Arvados instance. Use this option to run the command locally using @arv-run-pipeline-instance --run-jobs-here@. -* @--ignore-rcode@ : Some commands use non-zero exit codes to indicate nonfatal conditions (e.g. @grep@ returns 1 when no match is found). Set this to indicate that commands that return non-zero return codes should not be considered failed. +* @--ignore-rcode@ : Some commands use non-zero exit codes to indicate nonfatal conditions (e.g., @grep@ returns 1 when no match is found). Set this to indicate that commands that return non-zero return codes should not be considered failed. * @--no-wait@ : Do not wait and display logs after submitting command, just exit. h2. Putting it all together: bwa mem