X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/70d4cba7d4aef3063fb549a77b45951c339cc57c..2668643b7570db96651466250e7a496184f6ef0a:/doc/_config.yml

diff --git a/doc/_config.yml b/doc/_config.yml
index f2ddd7f58c..2a1ba00020 100644
--- a/doc/_config.yml
+++ b/doc/_config.yml
@@ -26,9 +26,10 @@ navbar:
       - user/getting_started/community.html.textile.liquid
     - Walkthough:
       - user/tutorials/wgs-tutorial.html.textile.liquid
-    - Run a workflow using Workbench:
+    - Using Workbench:
       - user/getting_started/workbench.html.textile.liquid
       - user/tutorials/tutorial-workflow-workbench.html.textile.liquid
+      - user/topics/workbench-migration.html.textile.liquid
     - Working at the Command Line:
       - user/getting_started/setup-cli.html.textile.liquid
       - user/reference/api-tokens.html.textile.liquid
@@ -49,6 +50,7 @@ navbar:
       - user/topics/storage-classes.html.textile.liquid
     - Data Analysis with Workflows:
       - user/cwl/arvados-vscode-training.html.md.liquid
+      - user/cwl/rnaseq-cwl-training.html.textile.liquid
       - user/cwl/cwl-runner.html.textile.liquid
       - user/cwl/cwl-run-options.html.textile.liquid
       - user/tutorials/writing-cwl-workflow.html.textile.liquid
@@ -76,7 +78,7 @@ navbar:
       - sdk/index.html.textile.liquid
     - Python:
       - sdk/python/sdk-python.html.textile.liquid
-      - sdk/python/example.html.textile.liquid
+      - sdk/python/api-client.html.textile.liquid
       - sdk/python/python.html.textile.liquid
       - sdk/python/arvados-fuse.html.textile.liquid
       - sdk/python/arvados-cwl-runner.html.textile.liquid
@@ -87,6 +89,7 @@ navbar:
       - sdk/cli/index.html.textile.liquid
       - sdk/cli/reference.html.textile.liquid
       - sdk/cli/subcommands.html.textile.liquid
+      - sdk/cli/project-management.html.textile.liquid
     - Go:
       - sdk/go/index.html.textile.liquid
       - sdk/go/example.html.textile.liquid
@@ -100,9 +103,6 @@ navbar:
       - sdk/java-v2/index.html.textile.liquid
       - sdk/java-v2/example.html.textile.liquid
       - sdk/java-v2/javadoc.html.textile.liquid
-    - Perl:
-      - sdk/perl/index.html.textile.liquid
-      - sdk/perl/example.html.textile.liquid
   api:
     - Concepts:
       - api/index.html.textile.liquid
@@ -129,6 +129,7 @@ navbar:
       - api/keep-s3.html.textile.liquid
       - api/keep-web-urls.html.textile.liquid
       - api/projects.html.textile.liquid
+      - api/properties.html.textile.liquid
       - api/methods/collections.html.textile.liquid
       - api/methods/repositories.html.textile.liquid
     - Container engine:
@@ -159,6 +160,7 @@ navbar:
     - Computation with Crunch:
       - api/execution.html.textile.liquid
       - architecture/dispatchcloud.html.textile.liquid
+      - architecture/hpc.html.textile.liquid
       - architecture/singularity.html.textile.liquid
     - Other:
       - api/permission-model.html.textile.liquid
@@ -169,21 +171,22 @@ navbar:
     - Users and Groups:
       - admin/user-management.html.textile.liquid
       - admin/user-management-cli.html.textile.liquid
+      - admin/group-management.html.textile.liquid
       - admin/reassign-ownership.html.textile.liquid
       - admin/link-accounts.html.textile.liquid
-      - admin/group-management.html.textile.liquid
       - admin/federation.html.textile.liquid
       - admin/merge-remote-account.html.textile.liquid
       - admin/migrating-providers.html.textile.liquid
-      - user/topics/arvados-sync-groups.html.textile.liquid
+      - user/topics/arvados-sync-external-sources.html.textile.liquid
       - admin/scoped-tokens.html.textile.liquid
       - admin/token-expiration-policy.html.textile.liquid
-      - admin/user-activity.html.textile.liquid
     - Monitoring:
       - admin/logging.html.textile.liquid
       - admin/metrics.html.textile.liquid
       - admin/health-checks.html.textile.liquid
+      - admin/diagnostics.html.textile.liquid
       - admin/management-token.html.textile.liquid
+      - admin/user-activity.html.textile.liquid
     - Data Management:
       - admin/collection-versioning.html.textile.liquid
       - admin/collection-managed-properties.html.textile.liquid
@@ -206,15 +209,13 @@ navbar:
       - install/index.html.textile.liquid
     - Docker quick start:
       - install/arvbox.html.textile.liquid
-    - Installation with Salt:
-      - install/salt.html.textile.liquid
-      - install/salt-vagrant.html.textile.liquid
+    - Arvados Installer:
       - install/salt-single-host.html.textile.liquid
       - install/salt-multi-host.html.textile.liquid
-    - Arvados on Kubernetes:
-      - install/arvados-on-kubernetes.html.textile.liquid
-      - install/arvados-on-kubernetes-minikube.html.textile.liquid
-      - install/arvados-on-kubernetes-GKE.html.textile.liquid
+#    - Arvados on Kubernetes:
+#      - install/arvados-on-kubernetes.html.textile.liquid
+#      - install/arvados-on-kubernetes-minikube.html.textile.liquid
+#      - install/arvados-on-kubernetes-GKE.html.textile.liquid
     - Manual installation:
       - install/install-manual-prerequisites.html.textile.liquid
       - install/packages.html.textile.liquid
@@ -227,6 +228,7 @@ navbar:
       - admin/maintenance-and-upgrading.html.textile.liquid
     - Core:
       - install/install-api-server.html.textile.liquid
+      - install/diagnostics.html.textile.liquid
     - Keep:
       - install/install-keepstore.html.textile.liquid
       - install/configure-fs-storage.html.textile.liquid
@@ -240,13 +242,13 @@ navbar:
       - install/install-ws.html.textile.liquid
       - install/install-workbench-app.html.textile.liquid
       - install/install-workbench2-app.html.textile.liquid
-      - install/install-composer.html.textile.liquid
+#      - install/install-composer.html.textile.liquid
     - Additional services:
       - install/install-shell-server.html.textile.liquid
       - install/install-webshell.html.textile.liquid
       - install/install-arv-git-httpd.html.textile.liquid
-    - Containers API (all):
-      - install/install-jobs-image.html.textile.liquid
+#    - Containers API (all):
+#      - install/install-jobs-image.html.textile.liquid
     - Containers API (cloud):
       - install/crunch2-cloud/install-compute-node.html.textile.liquid
       - install/crunch2-cloud/install-dispatch-cloud.html.textile.liquid