X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/6fcc1aa58cf380604c5e149d41e22e7c3a4678df..936ed3a6a7484917fc10636b3dc2c5fdd9578643:/sdk/cwl/arvados_cwl/arvcontainer.py diff --git a/sdk/cwl/arvados_cwl/arvcontainer.py b/sdk/cwl/arvados_cwl/arvcontainer.py index a94fdac522..84b98378f4 100644 --- a/sdk/cwl/arvados_cwl/arvcontainer.py +++ b/sdk/cwl/arvados_cwl/arvcontainer.py @@ -560,13 +560,19 @@ class RunnerContainer(Runner): } self.job_order[param] = {"$include": mnt} + container_image = arvados_jobs_image(self.arvrunner, self.jobs_image, runtimeContext) + + workflow_runner_req, _ = self.embedded_tool.get_requirement("http://arvados.org/cwl#WorkflowRunnerResources") + if workflow_runner_req and workflow_runner_req.get("acrContainerImage"): + container_image = workflow_runner_req.get("acrContainerImage") + container_req = { "name": self.name, "output_path": "/var/spool/cwl", "cwd": "/var/spool/cwl", "priority": self.priority, "state": "Committed", - "container_image": arvados_jobs_image(self.arvrunner, self.jobs_image, runtimeContext), + "container_image": container_image, "mounts": { "/var/lib/cwl/cwl.input.json": { "kind": "json", @@ -587,7 +593,7 @@ class RunnerContainer(Runner): "ram": 1024*1024 * (math.ceil(self.submit_runner_ram) + math.ceil(self.collection_cache_size)), "API": True }, - "use_existing": False, # Never reuse the runner container - see #15497. + "use_existing": self.reuse_runner, "properties": {} } @@ -611,6 +617,8 @@ class RunnerContainer(Runner): "content": packed } container_req["properties"]["template_uuid"] = self.embedded_tool.tool["id"][6:33] + elif self.embedded_tool.tool.get("id", "").startswith("file:"): + raise WorkflowException("Tool id '%s' is a local file but expected keep: or arvwf:" % self.embedded_tool.tool.get("id")) else: main = self.loadingContext.loader.idx["_:main"] if main.get("id") == "_:main": @@ -731,14 +739,9 @@ class RunnerContainer(Runner): logger.info("%s submitted container_request %s", self.arvrunner.label(self), response["uuid"]) - workbench1 = self.arvrunner.api.config()["Services"]["Workbench1"]["ExternalURL"] workbench2 = self.arvrunner.api.config()["Services"]["Workbench2"]["ExternalURL"] - url = "" if workbench2: url = "{}processes/{}".format(workbench2, response["uuid"]) - elif workbench1: - url = "{}container_requests/{}".format(workbench1, response["uuid"]) - if url: logger.info("Monitor workflow progress at %s", url)