X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/6e4cb07ddcf4b17a5871efa9dc2c1c510415cef3..ae92d144610446849eb568247a44f02ae985c281:/sdk/cwl/tests/arvados-tests.yml diff --git a/sdk/cwl/tests/arvados-tests.yml b/sdk/cwl/tests/arvados-tests.yml index 48255f8575..9e691bdba5 100644 --- a/sdk/cwl/tests/arvados-tests.yml +++ b/sdk/cwl/tests/arvados-tests.yml @@ -360,3 +360,92 @@ output: {} tool: wf/trick_defaults2.cwl doc: "Test issue 17462 - secondary file objects on file defaults are not resolved" + +- job: null + output: { + "stuff": { + "location": "bar.txt", + "basename": "bar.txt", + "class": "File", + "checksum": "sha1$da39a3ee5e6b4b0d3255bfef95601890afd80709", + "size": 0 + } + } + tool: 17521-dot-slash-glob.cwl + doc: "Test issue 17521 - bug with leading './' capturing files in subdirectories" + +- job: null + output: { + "stuff": { + "basename": "foo", + "class": "Directory", + "listing": [ + { + "basename": "bar.txt", + "checksum": "sha1$da39a3ee5e6b4b0d3255bfef95601890afd80709", + "class": "File", + "location": "foo/bar.txt", + "size": 0 + } + ], + "location": "foo" + } + } + tool: 10380-trailing-slash-dir.cwl + doc: "Test issue 10380 - bug with trailing slash when capturing an output directory" + +- job: null + output: { + "stuff": { + "basename": "78f3957c41d044352303a3fa326dff1e+102", + "class": "Directory", + "listing": [ + { + "basename": "baz.txt", + "checksum": "sha1$da39a3ee5e6b4b0d3255bfef95601890afd80709", + "class": "File", + "location": "78f3957c41d044352303a3fa326dff1e+102/baz.txt", + "size": 0 + }, + { + "basename": "foo", + "class": "Directory", + "listing": [ + { + "basename": "bar.txt", + "checksum": "sha1$da39a3ee5e6b4b0d3255bfef95601890afd80709", + "class": "File", + "location": "78f3957c41d044352303a3fa326dff1e+102/foo/bar.txt", + "size": 0 + } + ], + "location": "78f3957c41d044352303a3fa326dff1e+102/foo" + } + ], + "location": "78f3957c41d044352303a3fa326dff1e+102" + } + } + tool: 17801-runtime-outdir.cwl + doc: "Test issue 17801 - bug using $(runtime.outdir) to capture the output directory" + +- job: null + output: + "val": "keep:f225e6259bdd63bc7240599648dde9f1+97/hg19.fa" + tool: 17858-pack-visit-crash.cwl + doc: "Test issue 17858 - keep ref default inputs on ExpressionTool" + +- job: 17879-ignore-sbg-fields-job.yml + output: + "outstr": "foo woble bar" + tool: 17879-ignore-sbg-fields.cwl + doc: "Test issue 17879 - ignores sbg fields" + +- job: chipseq/chip-seq-single.json + output: {} + tool: chipseq/cwl-packed.json + doc: "Test issue 18723 - correctly upload two directories with the same basename" + +- job: null + output: {} + tool: 18994-basename/wf_ren.cwl + doc: "Test issue 18994 - correctly stage file with modified basename"