X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/6844ff128e34898eae1a2cc513d8a0bfa4aed545..HEAD:/doc/user/cwl/bwa-mem/bwa-mem-input-mixed.yml diff --git a/doc/user/cwl/bwa-mem/bwa-mem-input-mixed.yml b/doc/user/cwl/bwa-mem/bwa-mem-input-mixed.yml index 8863cba34c..73dd65c463 100755 --- a/doc/user/cwl/bwa-mem/bwa-mem-input-mixed.yml +++ b/doc/user/cwl/bwa-mem/bwa-mem-input-mixed.yml @@ -3,8 +3,10 @@ # # SPDX-License-Identifier: CC-BY-SA-3.0 -# Example input file using UUIDs to reference input collections. These -# will be resolved to content addresses before running the workflow. +# Example input file providing both content addresses and UUIDs. The +# collections identified by 'collectionUUID' will be checked that the +# current content of the collection record matches the content address +# in the 'location' field. $namespaces: arv: 'http://arvados.org/cwl#' @@ -13,15 +15,15 @@ cwl:tool: bwa-mem.cwl reference: class: File location: keep:2463fa9efeb75e099685528b3b9071e0+438/19.fasta.bwt - arv:collectionUUID: qr1hi-4zz18-pwid4w22a40jp8l + arv:collectionUUID: jutro-4zz18-tv416l321i4r01e read_p1: class: File location: keep:ae480c5099b81e17267b7445e35b4bc7+180/HWI-ST1027_129_D0THKACXX.1_1.fastq - arv:collectionUUID: qr1hi-4zz18-h615rgfmqt3wje0 + arv:collectionUUID: jutro-4zz18-8k5hsvee0izv2g3 read_p2: class: File location: keep:ae480c5099b81e17267b7445e35b4bc7+180/HWI-ST1027_129_D0THKACXX.1_2.fastq - arv:collectionUUID: qr1hi-4zz18-h615rgfmqt3wje0 + arv:collectionUUID: jutro-4zz18-8k5hsvee0izv2g3 group_id: arvados_tutorial sample_id: HWI-ST1027_129 PL: illumina