X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/5a4e3e7f2efcd6c3a291adcd3ec6fa154b3a9151..8d071942032d47e8553c8b4e711e9437712fea5b:/src/index.tsx
diff --git a/src/index.tsx b/src/index.tsx
index aac275f9d6..a4a5e366a2 100644
--- a/src/index.tsx
+++ b/src/index.tsx
@@ -5,20 +5,20 @@
import * as React from 'react';
import * as ReactDOM from 'react-dom';
import { Provider } from "react-redux";
-import { Workbench } from './views/workbench/workbench';
+import { MainPanel } from './views/main-panel/main-panel';
import './index.css';
-import { Route } from "react-router";
+import { Route } from 'react-router';
import createBrowserHistory from "history/createBrowserHistory";
-import { configureStore } from "./store/store";
+import { History } from "history";
+import { configureStore, RootStore } from './store/store';
import { ConnectedRouter } from "react-router-redux";
import { ApiToken } from "./views-components/api-token/api-token";
import { initAuth } from "./store/auth/auth-action";
import { createServices } from "./services/services";
-import { getProjectList } from "./store/project/project-action";
import { MuiThemeProvider } from '@material-ui/core/styles';
import { CustomTheme } from './common/custom-theme';
import { fetchConfig } from './common/config';
-import { addMenuActionSet, ContextMenuKind } from "./views-components/context-menu/context-menu";
+import { addMenuActionSet, ContextMenuKind } from './views-components/context-menu/context-menu';
import { rootProjectActionSet } from "./views-components/context-menu/action-sets/root-project-action-set";
import { projectActionSet } from "./views-components/context-menu/action-sets/project-action-set";
import { resourceActionSet } from './views-components/context-menu/action-sets/resource-action-set';
@@ -26,6 +26,30 @@ import { favoriteActionSet } from "./views-components/context-menu/action-sets/f
import { collectionFilesActionSet } from './views-components/context-menu/action-sets/collection-files-action-set';
import { collectionFilesItemActionSet } from './views-components/context-menu/action-sets/collection-files-item-action-set';
import { collectionActionSet } from './views-components/context-menu/action-sets/collection-action-set';
+import { collectionResourceActionSet } from './views-components/context-menu/action-sets/collection-resource-action-set';
+import { processActionSet } from './views-components/context-menu/action-sets/process-action-set';
+import { loadWorkbench } from './store/workbench/workbench-actions';
+import { Routes } from '~/routes/routes';
+import { trashActionSet } from "~/views-components/context-menu/action-sets/trash-action-set";
+import { ServiceRepository } from '~/services/services';
+import { initWebSocket } from '~/websocket/websocket';
+import { Config } from '~/common/config';
+import { addRouteChangeHandlers } from './routes/route-change-handlers';
+import { setCurrentTokenDialogApiHost } from '~/store/current-token-dialog/current-token-dialog-actions';
+import { processResourceActionSet } from '~/views-components/context-menu/action-sets/process-resource-action-set';
+import { progressIndicatorActions } from '~/store/progress-indicator/progress-indicator-actions';
+import { setUuidPrefix } from '~/store/workflow-panel/workflow-panel-actions';
+import { trashedCollectionActionSet } from '~/views-components/context-menu/action-sets/trashed-collection-action-set';
+import { ContainerRequestState } from '~/models/container-request';
+import { MountKind } from './models/mount-types';
+
+const getBuildNumber = () => "BN-" + (process.env.REACT_APP_BUILD_NUMBER || "dev");
+const getGitCommit = () => "GIT-" + (process.env.REACT_APP_GIT_COMMIT || "latest").substr(0, 7);
+const getBuildInfo = () => getBuildNumber() + " / " + getGitCommit();
+
+const buildInfo = getBuildInfo();
+
+console.log(`Starting arvados [${buildInfo}]`);
addMenuActionSet(ContextMenuKind.ROOT_PROJECT, rootProjectActionSet);
addMenuActionSet(ContextMenuKind.PROJECT, projectActionSet);
@@ -34,26 +58,41 @@ addMenuActionSet(ContextMenuKind.FAVORITE, favoriteActionSet);
addMenuActionSet(ContextMenuKind.COLLECTION_FILES, collectionFilesActionSet);
addMenuActionSet(ContextMenuKind.COLLECTION_FILES_ITEM, collectionFilesItemActionSet);
addMenuActionSet(ContextMenuKind.COLLECTION, collectionActionSet);
+addMenuActionSet(ContextMenuKind.COLLECTION_RESOURCE, collectionResourceActionSet);
+addMenuActionSet(ContextMenuKind.TRASHED_COLLECTION, trashedCollectionActionSet);
+addMenuActionSet(ContextMenuKind.PROCESS, processActionSet);
+addMenuActionSet(ContextMenuKind.PROCESS_RESOURCE, processResourceActionSet);
+addMenuActionSet(ContextMenuKind.TRASH, trashActionSet);
fetchConfig()
- .then(config => {
+ .then(({ config, apiHost }) => {
const history = createBrowserHistory();
- const services = createServices(config.API_HOST);
+ const services = createServices(config, {
+ progressFn: (id, working) => {
+ store.dispatch(progressIndicatorActions.TOGGLE_WORKING({ id, working }));
+ },
+ errorFn: (id, error) => {
+ // console.error("Backend error:", error);
+ // store.dispatch(snackbarActions.OPEN_SNACKBAR({ message: "Backend error", kind: SnackbarKind.ERROR }));
+ }
+ });
const store = configureStore(history, services);
+ store.subscribe(initListener(history, store, services, config));
store.dispatch(initAuth());
- store.dispatch(getProjectList(services.authService.getUuid()));
+ store.dispatch(setCurrentTokenDialogApiHost(apiHost));
+ store.dispatch(setUuidPrefix(config.uuidPrefix));
- const TokenComponent = (props: any) => ;
- const WorkbenchComponent = (props: any) => ;
+ const TokenComponent = (props: any) => ;
+ const MainPanelComponent = (props: any) => ;
const App = () =>
-
-
+
+
@@ -65,4 +104,154 @@ fetchConfig()
);
});
+const initListener = (history: History, store: RootStore, services: ServiceRepository, config: Config) => {
+ let initialized = false;
+ return async () => {
+ const { router, auth } = store.getState();
+ if (router.location && auth.user && !initialized) {
+ initialized = true;
+ initWebSocket(config, services.authService, store);
+ await store.dispatch(loadWorkbench());
+ addRouteChangeHandlers(history, store);
+ // createEnumCollectorWorkflow(services);
+ }
+ };
+};
+
+const createPrimitivesCollectorWorkflow = ({workflowService}:ServiceRepository) => {
+ workflowService.create({
+ name: 'Primitive values collector',
+ description: 'Workflow for collecting primitive values',
+ definition: "cwlVersion: v1.0\n$graph:\n- class: CommandLineTool\n requirements:\n - listing:\n - entryname: input_collector.log\n entry: |\n \"flag\":\n $(inputs.example_flag)\n \"string\":\n $(inputs.example_string)\n \"int\":\n $(inputs.example_int)\n \"long\":\n $(inputs.example_long)\n \"float\":\n $(inputs.example_float)\n \"double\":\n $(inputs.example_double)\n class: InitialWorkDirRequirement\n inputs:\n - type: double\n id: '#input_collector.cwl/example_double'\n - type: boolean\n id: '#input_collector.cwl/example_flag'\n - type: float\n id: '#input_collector.cwl/example_float'\n - type: int\n id: '#input_collector.cwl/example_int'\n - type: long\n id: '#input_collector.cwl/example_long'\n - type: string\n id: '#input_collector.cwl/example_string'\n outputs:\n - type: File\n outputBinding:\n glob: '*'\n id: '#input_collector.cwl/output'\n baseCommand: [echo]\n id: '#input_collector.cwl'\n- class: Workflow\n doc: Workflw for collecting primitive values\n inputs:\n - type: double\n label: Double value\n doc: This should allow for entering a decimal number (64-bit).\n id: '#main/example_double'\n default: 0.3333333333333333\n - type: boolean\n label: Boolean Flag\n doc: This should render as in checkbox.\n id: '#main/example_flag'\n default: true\n - type: float\n label: Float value\n doc: This should allow for entering a decimal number (32-bit).\n id: '#main/example_float'\n default: 0.15625\n - type: int\n label: Integer Number\n doc: This should allow for entering a number (32-bit signed).\n id: '#main/example_int'\n default: 2147483647\n - type: long\n label: Long Number\n doc: This should allow for entering a number (64-bit signed).\n id: '#main/example_long'\n default: 9223372036854775807\n - type: string\n label: Freetext\n doc: This should allow for entering an arbitrary char sequence.\n id: '#main/example_string'\n default: This is a string\n outputs:\n - type: File\n outputSource: '#main/input_collector/output'\n id: '#main/log_file'\n steps:\n - run: '#input_collector.cwl'\n in:\n - source: '#main/example_double'\n id: '#main/input_collector/example_double'\n - source: '#main/example_flag'\n id: '#main/input_collector/example_flag'\n - source: '#main/example_float'\n id: '#main/input_collector/example_float'\n - source: '#main/example_int'\n id: '#main/input_collector/example_int'\n - source: '#main/example_long'\n id: '#main/input_collector/example_long'\n - source: '#main/example_string'\n id: '#main/input_collector/example_string'\n out: ['#main/input_collector/output']\n id: '#main/input_collector'\n id: '#main'\n",
+ });
+};
+
+const createEnumCollectorWorkflow = ({workflowService}:ServiceRepository) => {
+ workflowService.create({
+ name: 'Enum values collector',
+ description: 'Workflow for collecting enum values',
+ definition: "cwlVersion: v1.0\n$graph:\n- class: CommandLineTool\n requirements:\n - listing:\n - entryname: input_collector.log\n entry: |\n \"enum_type\":\n $(inputs.enum_type)\n\n class: InitialWorkDirRequirement\n inputs:\n - type:\n type: enum\n symbols: ['#input_collector.cwl/enum_type/OTU table', '#input_collector.cwl/enum_type/Pathway\n table', '#input_collector.cwl/enum_type/Function table', '#input_collector.cwl/enum_type/Ortholog\n table']\n id: '#input_collector.cwl/enum_type'\n outputs:\n - type: File\n outputBinding:\n glob: '*'\n id: '#input_collector.cwl/output'\n baseCommand: [echo]\n id: '#input_collector.cwl'\n- class: Workflow\n doc: This is the description of the workflow\n inputs:\n - type:\n type: enum\n symbols: ['#main/enum_type/OTU table', '#main/enum_type/Pathway table', '#main/enum_type/Function\n table', '#main/enum_type/Ortholog table']\n name: '#enum_typef4179c7f-45f9-482d-a5db-1abb86698384'\n label: Enumeration Type\n doc: This should render as a drop-down menu.\n id: '#main/enum_type'\n default: OTU table\n outputs:\n - type: File\n outputSource: '#main/input_collector/output'\n id: '#main/log_file'\n steps:\n - run: '#input_collector.cwl'\n in:\n - source: '#main/enum_type'\n id: '#main/input_collector/enum_type'\n out: ['#main/input_collector/output']\n id: '#main/input_collector'\n id: '#main'\n",
+ });
+};
+
+const createSampleProcess = ({ containerRequestService }: ServiceRepository) => {
+ containerRequestService.create({
+ ownerUuid: 'c97qk-j7d0g-s3ngc1z0748hsmf',
+ name: 'Simple process 7',
+ state: ContainerRequestState.COMMITTED,
+ mounts: {
+ '/var/spool/cwl': {
+ kind: MountKind.COLLECTION,
+ writable: true,
+ },
+ 'stdout': {
+ kind: MountKind.MOUNTED_FILE,
+ path: '/var/spool/cwl/cwl.output.json'
+ },
+ '/var/lib/cwl/workflow.json': {
+ kind: MountKind.JSON,
+ content: {
+ "cwlVersion": "v1.0",
+ "$graph": [
+ {
+ "class": "CommandLineTool",
+ "requirements": [
+ {
+ "listing": [
+ {
+ "entryname": "input_collector.log",
+ "entry": "$(inputs.single_file.basename)\n"
+ }
+ ],
+ "class": "InitialWorkDirRequirement"
+ }
+ ],
+ "inputs": [
+ {
+ "type": "File",
+ "id": "#input_collector.cwl/single_file"
+ }
+ ],
+ "outputs": [
+ {
+ "type": "File",
+ "outputBinding": {
+ "glob": "*"
+ },
+ "id": "#input_collector.cwl/output"
+ }
+ ],
+ "baseCommand": [
+ "echo"
+ ],
+ "id": "#input_collector.cwl"
+ },
+ {
+ "class": "Workflow",
+ "doc": "This is the description of the workflow",
+ "inputs": [
+ {
+ "type": "File",
+ "label": "Single File",
+ "doc": "This should allow for single File selection only.",
+ "id": "#main/single_file"
+ }
+ ],
+ "outputs": [
+ {
+ "type": "File",
+ "outputSource": "#main/input_collector/output",
+ "id": "#main/log_file"
+ }
+ ],
+ "steps": [
+ {
+ "run": "#input_collector.cwl",
+ "in": [
+ {
+ "source": "#main/single_file",
+ "id": "#main/input_collector/single_file"
+ }
+ ],
+ "out": [
+ "#main/input_collector/output"
+ ],
+ "id": "#main/input_collector"
+ }
+ ],
+ "id": "#main"
+ }
+ ]
+ },
+ },
+ '/var/lib/cwl/cwl.input.json': {
+ kind: MountKind.JSON,
+ content: {
+ "single_file": {
+ "class": "File",
+ "location": "keep:233454526794c0a2d56a305baeff3d30+145/1.txt",
+ "basename": "fileA"
+ }
+ },
+ }
+ },
+ runtimeConstraints: {
+ API: true,
+ vcpus: 1,
+ ram: 1073741824,
+ },
+ containerImage: 'arvados/jobs:1.1.4.20180618144723',
+ cwd: '/var/spool/cwl',
+ command: [
+ 'arvados-cwl-runner',
+ '--local',
+ '--api=containers',
+ "--project-uuid=c97qk-j7d0g-s3ngc1z0748hsmf",
+ '/var/lib/cwl/workflow.json#main',
+ '/var/lib/cwl/cwl.input.json'
+ ],
+ outputPath: '/var/spool/cwl',
+ priority: 1,
+ });
+};