X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/4ed794e2803ef9812dbc7ae938a8e17b3b9714c1..21598295f38998d8028aaa117f192de6b5758808:/apps/workbench/app/controllers/work_units_controller.rb diff --git a/apps/workbench/app/controllers/work_units_controller.rb b/apps/workbench/app/controllers/work_units_controller.rb index ff69d89fda..550bdb7e95 100644 --- a/apps/workbench/app/controllers/work_units_controller.rb +++ b/apps/workbench/app/controllers/work_units_controller.rb @@ -1,4 +1,9 @@ class WorkUnitsController < ApplicationController + skip_around_filter :require_thread_api_token, if: proc { |ctrl| + Rails.configuration.anonymous_user_token and + 'show_child_component' == ctrl.action_name + } + def find_objects_for_index # If it's not the index rows partial display, just return # The /index request will again be invoked to display the @@ -9,12 +14,16 @@ class WorkUnitsController < ApplicationController @filters = @filters || [] # get next page of pipeline_instances - filters = @filters + [["uuid", "is_a", ["arvados#pipelineInstance"]]] - pipelines = PipelineInstance.limit(@limit).order(["created_at desc"]).filter(filters) + if PipelineInstance.api_exists?(:index) + filters = @filters + [["uuid", "is_a", ["arvados#pipelineInstance"]]] + pipelines = PipelineInstance.limit(@limit).order(["created_at desc"]).filter(filters) + end # get next page of jobs - filters = @filters + [["uuid", "is_a", ["arvados#job"]]] - jobs = Job.limit(@limit).order(["created_at desc"]).filter(filters) + if Job.api_exists?(:index) + filters = @filters + [["uuid", "is_a", ["arvados#job"]]] + jobs = Job.limit(@limit).order(["created_at desc"]).filter(filters) + end # get next page of container_requests filters = @filters + [["uuid", "is_a", ["arvados#containerRequest"]]] @@ -34,4 +43,140 @@ class WorkUnitsController < ApplicationController def next_page_href with_params={} @next_page_href end + + def create + template_uuid = params['work_unit']['template_uuid'] + + attrs = {} + rc = resource_class_for_uuid(template_uuid) + if rc == PipelineTemplate + model_class = PipelineInstance + attrs['pipeline_template_uuid'] = template_uuid + elsif rc == Workflow + # workflow json + workflow = Workflow.find? template_uuid + if workflow.definition + begin + wf_json = ActiveSupport::HashWithIndifferentAccess.new YAML::load(workflow.definition) + rescue => e + logger.error "Error converting definition yaml to json: #{e.message}" + raise ArgumentError, "Error converting definition yaml to json: #{e.message}" + end + end + + model_class = ContainerRequest + + attrs['name'] = "#{workflow['name']} container" if workflow['name'].present? + attrs['properties'] = {'template_uuid' => template_uuid} + attrs['priority'] = 1 + attrs['state'] = "Uncommitted" + + # required + attrs['command'] = ["arvados-cwl-runner", "--local", "--api=containers", "/var/lib/cwl/workflow.json#main", "/var/lib/cwl/cwl.input.json"] + attrs['container_image'] = "arvados/jobs" + attrs['cwd'] = "/var/spool/cwl" + attrs['output_path'] = "/var/spool/cwl" + + input_defaults = {} + if wf_json + inputs = get_cwl_inputs(wf_json) + inputs.each do |input| + if input[:default] + input_defaults[cwl_shortname(input[:id])] = input[:default] + end + end + end + + # mounts + mounts = { + "/var/lib/cwl/cwl.input.json" => { + "kind" => "json", + "content" => input_defaults + }, + "stdout" => { + "kind" => "file", + "path" => "/var/spool/cwl/cwl.output.json" + }, + "/var/spool/cwl" => { + "kind" => "collection", + "writable" => true + } + } + if wf_json + mounts["/var/lib/cwl/workflow.json"] = { + "kind" => "json", + "content" => wf_json + } + end + attrs['mounts'] = mounts + + # runtime constriants + runtime_constraints = { + "vcpus" => 1, + "ram" => 256000000, + "API" => true + } + attrs['runtime_constraints'] = runtime_constraints + else + raise ArgumentError, "Unsupported template uuid: #{template_uuid}" + end + + attrs['owner_uuid'] = params['work_unit']['owner_uuid'] + @object ||= model_class.new attrs + + if @object.save + redirect_to @object + else + render_error status: 422 + end + end + + def find_object_by_uuid + if params['object_type'] + @object = params['object_type'].constantize.find(params['uuid']) + else + super + end + end + + def show_child_component + data = JSON.load(params[:action_data]) + + current_obj = {} + current_obj_uuid = data['current_obj_uuid'] + current_obj_name = data['current_obj_name'] + current_obj_type = data['current_obj_type'] + current_obj_parent = data['current_obj_parent'] + if current_obj_uuid + resource_class = resource_class_for_uuid current_obj_uuid + obj = object_for_dataclass(resource_class, current_obj_uuid) + current_obj = obj if obj + end + + if current_obj.is_a?(Hash) and !current_obj.any? + if current_obj_parent + resource_class = resource_class_for_uuid current_obj_parent + parent = object_for_dataclass(resource_class, current_obj_parent) + parent_wu = parent.work_unit + children = parent_wu.children + if current_obj_uuid + wu = children.select {|c| c.uuid == current_obj_uuid}.first + else current_obj_name + wu = children.select {|c| c.label.to_s == current_obj_name}.first + end + end + else + if current_obj_type == JobWorkUnit.to_s + wu = JobWorkUnit.new(current_obj, current_obj_name, current_obj_parent) + elsif current_obj_type == PipelineInstanceWorkUnit.to_s + wu = PipelineInstanceWorkUnit.new(current_obj, current_obj_name, current_obj_parent) + elsif current_obj_type == ContainerWorkUnit.to_s + wu = ContainerWorkUnit.new(current_obj, current_obj_name, current_obj_parent) + end + end + + respond_to do |f| + f.html { render(partial: "show_component", locals: {wu: wu}) } + end + end end