X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/4ec57503920f7cd47a48cb0d0cf089517b8d2dd3..cedd2b046ddf4d2f819a4d1dedbbe82d4e70e72d:/sdk/cli/bin/crunch-job diff --git a/sdk/cli/bin/crunch-job b/sdk/cli/bin/crunch-job index 5345b37c3d..06b3da99a9 100755 --- a/sdk/cli/bin/crunch-job +++ b/sdk/cli/bin/crunch-job @@ -499,16 +499,17 @@ if (!$have_slurm) # If this job requires a Docker image, install that. my $docker_bin = "/usr/bin/docker.io"; -my ($docker_locator, $docker_hash); +my ($docker_locator, $docker_stream, $docker_hash); if ($docker_locator = $Job->{docker_image_locator}) { - $docker_hash = find_docker_hash($docker_locator); + ($docker_stream, $docker_hash) = find_docker_image($docker_locator); if (!$docker_hash) { croak("No Docker image hash found from locator $docker_locator"); } + $docker_stream =~ s/^\.//; my $docker_install_script = qq{ if ! $docker_bin images -q --no-trunc | grep -qxF \Q$docker_hash\E; then - arv-get \Q$docker_locator/$docker_hash.tar\E | $docker_bin load + arv-get \Q$docker_locator$docker_stream/$docker_hash.tar\E | $docker_bin load fi }; my $docker_pid = fork(); @@ -834,8 +835,10 @@ if ($job_has_uuid) { 'finished_at' => scalar gmtime) } -if ($collated_output) -{ +if (!$collated_output) { + Log(undef, "output undef"); +} +else { eval { open(my $orig_manifest, '-|', 'arv-get', $collated_output) or die "failed to get collated manifest: $!"; @@ -858,7 +861,8 @@ if ($collated_output) 'uuid' => md5_hex($stripped_manifest_text), 'manifest_text' => $orig_manifest_text, }); - $Job->update_attributes('output' => $output->{uuid}); + Log(undef, "output " . $output->{uuid}); + $Job->update_attributes('output' => $output->{uuid}) if $job_has_uuid; if ($Job->{'output_is_persistent'}) { $arv->{'links'}->{'create'}->execute('link' => { 'tail_kind' => 'arvados#user', @@ -1244,15 +1248,6 @@ sub collate_output } waitpid($pid, 0); - if ($joboutput) - { - Log (undef, "output $joboutput"); - $Job->update_attributes('output' => $joboutput) if $job_has_uuid; - } - else - { - Log (undef, "output undef"); - } return $joboutput; } @@ -1472,19 +1467,19 @@ sub must_lock_now } } -sub find_docker_hash { - # Given a Keep locator, search for a matching link to find the Docker hash - # of the stored image. +sub find_docker_image { + # Given a Keep locator, check to see if it contains a Docker image. + # If so, return its stream name and Docker hash. + # If not, return undef for both values. my $locator = shift; - my $links_result = $arv->{links}->{list}->execute( - filters => [["head_uuid", "=", $locator], - ["link_class", "=", "docker_image_hash"]], - limit => 1); - my $docker_hash; - foreach my $link (@{$links_result->{items}}) { - $docker_hash = lc($link->{name}); + if (my $image = $arv->{collections}->{get}->execute(uuid => $locator)) { + my @file_list = @{$image->{files}}; + if ((scalar(@file_list) == 1) && + ($file_list[0][1] =~ /^([0-9A-Fa-f]{64})\.tar$/)) { + return ($file_list[0][0], $1); + } } - return $docker_hash; + return (undef, undef); } __DATA__