X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/45216b83b108a3c48cdd8b1aaf898ccd93188507..3657c576451610bc6e7f269cbf4f13cb18ff35ba:/sdk/cli/bin/arv-run-pipeline-instance?ds=sidebyside diff --git a/sdk/cli/bin/arv-run-pipeline-instance b/sdk/cli/bin/arv-run-pipeline-instance index e552d77f3a..ed4fbd55f6 100755 --- a/sdk/cli/bin/arv-run-pipeline-instance +++ b/sdk/cli/bin/arv-run-pipeline-instance @@ -187,7 +187,9 @@ if $options[:instance] abort "#{$0}: syntax error: --instance cannot be combined with --template or --submit." end elsif not $options[:template] - abort "#{$0}: syntax error: you must supply a --template or --instance." + puts "error: you must supply a --template or --instance." + p.educate + abort end if $options[:run_here] == $options[:submit] @@ -443,10 +445,12 @@ class WhRunPipelineInstance moretodo = true interrupted = false + job_creation_failed = 0 while moretodo moretodo = false @components.each do |cname, c| job = nil + owner_uuid = @instance[:owner_uuid] # Is the job satisfying this component already known to be # finished? (Already meaning "before we query API server about # the job's current state") @@ -465,25 +469,22 @@ class WhRunPipelineInstance :repository => c[:repository], :nondeterministic => c[:nondeterministic], :output_is_persistent => c[:output_is_persistent] || false, - # TODO: Delete the following three attributes when - # supporting pre-20140418 API servers is no longer - # important. New API servers take these as flags that - # control behavior of create, rather than job attributes. - :minimum_script_version => c[:minimum_script_version], - :exclude_script_versions => c[:exclude_minimum_script_versions], - :no_reuse => @options[:no_reuse] || c[:nondeterministic], + :runtime_constraints => c[:runtime_constraints], + :owner_uuid => owner_uuid, }, { # This is the right place to put these attributes when # dealing with new API servers. :minimum_script_version => c[:minimum_script_version], :exclude_script_versions => c[:exclude_minimum_script_versions], :find_or_create => !(@options[:no_reuse] || c[:nondeterministic]), + :filters => c[:filters] }) if job debuglog "component #{cname} new job #{job[:uuid]}" c[:job] = job else - debuglog "component #{cname} new job failed" + debuglog "component #{cname} new job failed", 0 + job_creation_failed += 1 end end @@ -537,7 +538,8 @@ class WhRunPipelineInstance tail_kind: 'arvados#user', tail_uuid: @my_user_uuid, head_kind: 'arvados#collection', - head_uuid: wanted + head_uuid: wanted, + owner_uuid: owner_uuid } debuglog "added link, uuid #{newlink[:uuid]}" end @@ -559,6 +561,11 @@ class WhRunPipelineInstance moretodo = false end + # If job creation fails, just give up on this pipeline instance. + if job_creation_failed > 0 + moretodo = false + end + if moretodo begin sleep 10 @@ -575,11 +582,11 @@ class WhRunPipelineInstance failed = 0 @components.each do |cname, c| if c[:job] - if c[:job][:finished_at] + if c[:job][:finished_at] or c[:job][:cancelled_at] or (c[:job][:running] == false and c[:job][:success] == false) ended += 1 if c[:job][:success] == true succeeded += 1 - elsif c[:job][:success] == false + elsif c[:job][:success] == false or c[:job][:cancelled_at] failed += 1 end end @@ -588,6 +595,13 @@ class WhRunPipelineInstance success = (succeeded == @components.length) + # A job create call failed. Just give up. + if job_creation_failed > 0 + debuglog "job creation failed - giving up on this pipeline instance", 0 + success = false + failed += 1 + end + if interrupted if success @instance[:state] = 'Complete' @@ -600,6 +614,8 @@ class WhRunPipelineInstance end end + debuglog "pipeline instance state is #{@instance[:state]}" + # set components_summary components_summary = {"todo" => @components.length - ended, "done" => succeeded, "failed" => failed} @instance[:components_summary] = components_summary