X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/44a02057129016d806b32cc5478bdffef1a565f8..5aa7b2ef565348e637af8dfd9351f82c8cc5b5e6:/doc/_config.yml diff --git a/doc/_config.yml b/doc/_config.yml index 9917b0fdf1..191016ec43 100644 --- a/doc/_config.yml +++ b/doc/_config.yml @@ -24,41 +24,43 @@ navbar: - Welcome: - user/index.html.textile.liquid - user/getting_started/community.html.textile.liquid + - Walkthough: + - user/tutorials/wgs-tutorial.html.textile.liquid - Run a workflow using Workbench: - user/getting_started/workbench.html.textile.liquid - user/tutorials/tutorial-workflow-workbench.html.textile.liquid - - user/composer/composer.html.textile.liquid + - Working at the Command Line: + - user/getting_started/setup-cli.html.textile.liquid + - user/reference/api-tokens.html.textile.liquid + - user/getting_started/check-environment.html.textile.liquid - Access an Arvados virtual machine: - user/getting_started/vm-login-with-webshell.html.textile.liquid - user/getting_started/ssh-access-unix.html.textile.liquid - user/getting_started/ssh-access-windows.html.textile.liquid - - user/getting_started/check-environment.html.textile.liquid - - user/reference/api-tokens.html.textile.liquid - Working with data sets: - user/tutorials/tutorial-keep.html.textile.liquid - user/tutorials/tutorial-keep-get.html.textile.liquid - user/tutorials/tutorial-keep-mount-gnu-linux.html.textile.liquid - user/tutorials/tutorial-keep-mount-os-x.html.textile.liquid - user/tutorials/tutorial-keep-mount-windows.html.textile.liquid - - user/topics/keep.html.textile.liquid - user/tutorials/tutorial-keep-collection-lifecycle.html.textile.liquid - user/topics/arv-copy.html.textile.liquid - - user/topics/storage-classes.html.textile.liquid - user/topics/collection-versioning.html.textile.liquid - - Working with git repositories: - - user/tutorials/add-new-repository.html.textile.liquid - - user/tutorials/git-arvados-guide.html.textile.liquid - - Running workflows at the command line: + - user/topics/storage-classes.html.textile.liquid + - Data Analysis with Workflows: + - user/cwl/arvados-vscode-training.html.md.liquid - user/cwl/cwl-runner.html.textile.liquid - user/cwl/cwl-run-options.html.textile.liquid - - Develop an Arvados workflow: - - user/tutorials/intro-crunch.html.textile.liquid - user/tutorials/writing-cwl-workflow.html.textile.liquid + - user/topics/arv-docker.html.textile.liquid - user/cwl/cwl-style.html.textile.liquid - - user/cwl/federated-workflows.html.textile.liquid - user/cwl/cwl-extensions.html.textile.liquid + - user/cwl/federated-workflows.html.textile.liquid - user/cwl/cwl-versions.html.textile.liquid - - user/topics/arv-docker.html.textile.liquid + - user/cwl/crunchstat-summary.html.textile.liquid + - Working with git repositories: + - user/tutorials/add-new-repository.html.textile.liquid + - user/tutorials/git-arvados-guide.html.textile.liquid - Reference: - user/topics/link-accounts.html.textile.liquid - user/reference/cookbook.html.textile.liquid @@ -75,8 +77,9 @@ navbar: - sdk/python/example.html.textile.liquid - sdk/python/python.html.textile.liquid - sdk/python/arvados-fuse.html.textile.liquid - - sdk/python/events.html.textile.liquid + - sdk/python/arvados-cwl-runner.html.textile.liquid - sdk/python/cookbook.html.textile.liquid + - sdk/python/events.html.textile.liquid - CLI: - sdk/cli/install.html.textile.liquid - sdk/cli/index.html.textile.liquid @@ -123,6 +126,9 @@ navbar: - api/methods/virtual_machines.html.textile.liquid - api/methods/keep_disks.html.textile.liquid - Data management: + - api/keep-webdav.html.textile.liquid + - api/keep-s3.html.textile.liquid + - api/keep-web-urls.html.textile.liquid - api/methods/collections.html.textile.liquid - api/methods/repositories.html.textile.liquid - Container engine: @@ -144,8 +150,15 @@ navbar: architecture: - Topics: - architecture/index.html.textile.liquid - - api/storage.html.textile.liquid + - Storage in Keep: + - architecture/storage.html.textile.liquid + - architecture/keep-components-overview.html.textile.liquid + - architecture/keep-clients.html.textile.liquid + - architecture/keep-data-lifecycle.html.textile.liquid + - architecture/manifest-format.html.textile.liquid + - Computation with Crunch: - api/execution.html.textile.liquid + - Other: - api/permission-model.html.textile.liquid - architecture/federation.html.textile.liquid admin: @@ -153,14 +166,17 @@ navbar: - admin/index.html.textile.liquid - Users and Groups: - admin/user-management.html.textile.liquid - - admin/reassign-ownership.html.textile.liquid - admin/user-management-cli.html.textile.liquid + - admin/reassign-ownership.html.textile.liquid + - admin/link-accounts.html.textile.liquid - admin/group-management.html.textile.liquid - admin/federation.html.textile.liquid - admin/merge-remote-account.html.textile.liquid - admin/migrating-providers.html.textile.liquid - user/topics/arvados-sync-groups.html.textile.liquid - admin/scoped-tokens.html.textile.liquid + - admin/token-expiration-policy.html.textile.liquid + - admin/user-activity.html.textile.liquid - Monitoring: - admin/logging.html.textile.liquid - admin/metrics.html.textile.liquid @@ -174,6 +190,8 @@ navbar: - admin/logs-table-management.html.textile.liquid - admin/workbench2-vocabulary.html.textile.liquid - admin/storage-classes.html.textile.liquid + - admin/keep-recovering-data.html.textile.liquid + - admin/keep-measuring-deduplication.html.textile.liquid - Cloud: - admin/spot-instances.html.textile.liquid - admin/cloudtest.html.textile.liquid @@ -185,6 +203,11 @@ navbar: - install/index.html.textile.liquid - Docker quick start: - install/arvbox.html.textile.liquid + - Installation with Salt: + - install/salt.html.textile.liquid + - install/salt-vagrant.html.textile.liquid + - install/salt-single-host.html.textile.liquid + - install/salt-multi-host.html.textile.liquid - Arvados on Kubernetes: - install/arvados-on-kubernetes.html.textile.liquid - install/arvados-on-kubernetes-minikube.html.textile.liquid @@ -209,23 +232,25 @@ navbar: - install/install-keep-balance.html.textile.liquid - User interface: - install/setup-login.html.textile.liquid - - install/install-sso.html.textile.liquid + - install/install-ws.html.textile.liquid - install/install-workbench-app.html.textile.liquid - install/install-workbench2-app.html.textile.liquid - install/install-composer.html.textile.liquid - Additional services: - - install/install-ws.html.textile.liquid - - install/install-arv-git-httpd.html.textile.liquid - install/install-shell-server.html.textile.liquid - - Containers API: - - install/crunch2-slurm/install-compute-node.html.textile.liquid + - install/install-webshell.html.textile.liquid + - install/install-arv-git-httpd.html.textile.liquid + - Containers API (cloud): - install/install-jobs-image.html.textile.liquid - - install/install-dispatch-cloud.html.textile.liquid + - install/crunch2-cloud/install-compute-node.html.textile.liquid + - install/crunch2-cloud/install-dispatch-cloud.html.textile.liquid + - Containers API (slurm): - install/crunch2-slurm/install-dispatch.html.textile.liquid + - install/crunch2-slurm/configure-slurm.html.textile.liquid + - install/crunch2-slurm/install-compute-node.html.textile.liquid - install/crunch2-slurm/install-test.html.textile.liquid - External dependencies: - install/install-postgresql.html.textile.liquid - install/ruby.html.textile.liquid - install/nginx.html.textile.liquid - - install/google-auth.html.textile.liquid - install/install-docker.html.textile.liquid