X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/33b27555b25e70a0d37c5a8267450fddf3bd81b1..7b6a085a92e78787a15a34ad8e536444ad230552:/tools/copy-tutorial/copy-tutorial.sh diff --git a/tools/copy-tutorial/copy-tutorial.sh b/tools/copy-tutorial/copy-tutorial.sh new file mode 100755 index 0000000000..bdc75da2e1 --- /dev/null +++ b/tools/copy-tutorial/copy-tutorial.sh @@ -0,0 +1,25 @@ +#!/bin/sh +# Copyright (C) The Arvados Authors. All rights reserved. +# +# SPDX-License-Identifier: AGPL-3.0 + +set -e + +if test -z "$1" ; then + echo "$0: Copies Arvados tutorial resources from public data cluster (jutro)" + echo "Usage: copy-tutorial.sh " + echo " is destination cluster configuration that can be found in ~/.config/arvados" + exit +fi + +echo "Copying from public data cluster (jutro) to $1" + +for a in $(cat $HOME/.config/arvados/$1.conf) ; do export $a ; done + +project_uuid=$(arv --format=uuid group create --group '{"name":"User guide resources", "group_class": "project"}') + +# Bwa-mem workflow +arv-copy --src jutro --dst $1 --project-uuid=$project_uuid f141fc27e7cfa7f7b6d208df5e0ee01b+59 +arv-copy --src jutro --dst $1 --project-uuid=$project_uuid jutro-7fd4e-mkmmq53m1ze6apx + +echo "Data copied to \"User guide resources\" at $project_uuid"