X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/2b5d9607892a48d32401ff59516e8d73234eee89..7a54fd6a073e03f98f68d0b6c816a9f394f625dd:/doc/user/tutorials/running-external-program.html.textile.liquid diff --git a/doc/user/tutorials/running-external-program.html.textile.liquid b/doc/user/tutorials/running-external-program.html.textile.liquid index 56b71c05ee..e683dea8dc 100644 --- a/doc/user/tutorials/running-external-program.html.textile.liquid +++ b/doc/user/tutorials/running-external-program.html.textile.liquid @@ -6,11 +6,11 @@ title: "Using Crunch to run external programs" This tutorial demonstrates how to use Crunch to run an external program by writting a wrapper using the Python SDK. -*This tutorial assumes that you are "logged into an Arvados VM instance":{{site.baseurl}}/user/getting_started/ssh-access.html#login, and have a "working environment.":{{site.baseurl}}/user/getting_started/check-environment.html* +{% include 'tutorial_expectations' %} In this tutorial, you will use the external program @md5sum@ to compute hashes instead of the built-in Python library used in earlier tutorials. -Start by entering the @crunch_scripts@ directory of your git repository: +Start by entering the @crunch_scripts@ directory of your Git working tree:
~$ cd you/crunch_scripts
@@ -29,7 +29,7 @@ Make the file executable:
 
 notextile. 
~/you/crunch_scripts$ chmod +x run-md5sum.py
-Next, use @git@ to stage the file, commit, and push: +Next, use Git to stage the file, commit, and push:
~/you/crunch_scripts$ git add run-md5sum.py
@@ -63,6 +63,6 @@ EOF
 
-(Your shell should automatically fill in @$USER@ with your login name. The JSON that gets saved should have @"repository"@ pointed at your personal git repository.) +(Your shell should automatically fill in @$USER@ with your login name. The JSON that gets saved should have @"repository"@ pointed at your personal Git repository.) -Your new pipeline template will appear on the Workbench "Compute %(rarr)→% Pipeline templates":https://{{ site.arvados_workbench_host }}/pipeline_instances page. You can run the "pipeline using Workbench":tutorial-pipeline-workbench.html. +Your new pipeline template will appear on the Workbench "Pipeline templates":https://{{ site.arvados_workbench_host }}/pipeline_templates page. You can run the "pipeline using Workbench":tutorial-pipeline-workbench.html.