X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/25216cc7acedc987c26a159f0b640210c0ef101e..4b15593e83bf1a6e1c84c1e18af4b11b9fa1d134:/src/store/processes/processes-actions.ts diff --git a/src/store/processes/processes-actions.ts b/src/store/processes/processes-actions.ts index 6bd2976c11..18d9591150 100644 --- a/src/store/processes/processes-actions.ts +++ b/src/store/processes/processes-actions.ts @@ -3,64 +3,178 @@ // SPDX-License-Identifier: AGPL-3.0 import { Dispatch } from "redux"; -import { RootState } from 'store/store'; -import { ServiceRepository } from 'services/services'; -import { updateResources } from 'store/resources/resources-actions'; -import { Process } from './process'; -import { dialogActions } from 'store/dialog/dialog-actions'; -import { snackbarActions, SnackbarKind } from 'store/snackbar/snackbar-actions'; -import { projectPanelActions } from 'store/project-panel/project-panel-action'; -import { navigateToRunProcess } from 'store/navigation/navigation-action'; -import { goToStep, runProcessPanelActions } from 'store/run-process-panel/run-process-panel-actions'; -import { getResource } from 'store/resources/resources'; +import { RootState } from "store/store"; +import { ServiceRepository } from "services/services"; +import { updateResources } from "store/resources/resources-actions"; +import { Process } from "./process"; +import { dialogActions } from "store/dialog/dialog-actions"; +import { snackbarActions, SnackbarKind } from "store/snackbar/snackbar-actions"; +import { projectPanelActions } from "store/project-panel/project-panel-action"; +import { navigateToRunProcess } from "store/navigation/navigation-action"; +import { goToStep, runProcessPanelActions } from "store/run-process-panel/run-process-panel-actions"; +import { getResource } from "store/resources/resources"; import { initialize } from "redux-form"; import { RUN_PROCESS_BASIC_FORM, RunProcessBasicFormData } from "views/run-process-panel/run-process-basic-form"; import { RunProcessAdvancedFormData, RUN_PROCESS_ADVANCED_FORM } from "views/run-process-panel/run-process-advanced-form"; -import { MOUNT_PATH_CWL_WORKFLOW, MOUNT_PATH_CWL_INPUT } from 'models/process'; -import { getWorkflow, getWorkflowInputs } from "models/workflow"; +import { MOUNT_PATH_CWL_WORKFLOW, MOUNT_PATH_CWL_INPUT } from "models/process"; +import { CommandInputParameter, getWorkflow, getWorkflowInputs, getWorkflowOutputs, WorkflowInputsData } from "models/workflow"; +import { ProjectResource } from "models/project"; +import { UserResource } from "models/user"; +import { CommandOutputParameter } from "cwlts/mappings/v1.0/CommandOutputParameter"; +import { ContainerResource } from "models/container"; +import { ContainerRequestResource, ContainerRequestState } from "models/container-request"; +import { FilterBuilder } from "services/api/filter-builder"; +import { selectedToArray } from "components/multiselect-toolbar/MultiselectToolbar"; +import { Resource, ResourceKind } from "models/resource"; -export const loadProcess = (containerRequestUuid: string) => - async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository): Promise => { - const containerRequest = await services.containerRequestService.get(containerRequestUuid); - dispatch(updateResources([containerRequest])); +export const loadProcess = + (containerRequestUuid: string) => + async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository): Promise => { + let containerRequest: ContainerRequestResource | undefined = undefined; + try { + containerRequest = await services.containerRequestService.get(containerRequestUuid); + dispatch(updateResources([containerRequest])); + } catch { + return undefined; + } + + if (containerRequest.outputUuid) { + try { + const collection = await services.collectionService.get(containerRequest.outputUuid, false); + dispatch(updateResources([collection])); + } catch {} + } if (containerRequest.containerUuid) { - const container = await services.containerService.get(containerRequest.containerUuid); - dispatch(updateResources([container])); + let container: ContainerResource | undefined = undefined; + try { + container = await services.containerService.get(containerRequest.containerUuid, false); + dispatch(updateResources([container])); + } catch {} + + try { + if (container && container.runtimeUserUuid) { + const runtimeUser = await services.userService.get(container.runtimeUserUuid, false); + dispatch(updateResources([runtimeUser])); + } + } catch {} + return { containerRequest, container }; } return { containerRequest }; }; -export const loadContainers = (filters: string) => +export const loadContainers = + (containerUuids: string[], loadMounts: boolean = true) => async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { - const { items } = await services.containerService.list({ filters }); + let args: any = { + filters: new FilterBuilder().addIn("uuid", containerUuids).getFilters(), + limit: containerUuids.length, + }; + if (!loadMounts) { + args.select = containerFieldsNoMounts; + } + const { items } = await services.containerService.list(args); dispatch(updateResources(items)); return items; }; -export const cancelRunningWorkflow = (uuid: string) => - async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { - try { - const process = await services.containerRequestService.update(uuid, { priority: 0 }); - return process; - } catch (e) { - throw new Error('Could not cancel the process.'); +// Until the api supports unselecting fields, we need a list of all other fields to omit mounts +const containerFieldsNoMounts = [ + "auth_uuid", + "command", + "container_image", + "cost", + "created_at", + "cwd", + "environment", + "etag", + "exit_code", + "finished_at", + "gateway_address", + "href", + "interactive_session_started", + "kind", + "lock_count", + "locked_by_uuid", + "log", + "modified_at", + "modified_by_client_uuid", + "modified_by_user_uuid", + "output_path", + "output_properties", + "output_storage_classes", + "output", + "owner_uuid", + "priority", + "progress", + "runtime_auth_scopes", + "runtime_constraints", + "runtime_status", + "runtime_user_uuid", + "scheduling_parameters", + "started_at", + "state", + "uuid", +]; + +export const cancelRunningWorkflow = (uuid: string) => async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { + try { + const process = await services.containerRequestService.update(uuid, { priority: 0 }); + dispatch(updateResources([process])); + if (process.containerUuid) { + const container = await services.containerService.get(process.containerUuid, false); + dispatch(updateResources([container])); } - }; + return process; + } catch (e) { + throw new Error("Could not cancel the process."); + } +}; + +export const resumeOnHoldWorkflow = (uuid: string) => async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { + try { + const process = await services.containerRequestService.update(uuid, { priority: 500 }); + dispatch(updateResources([process])); + if (process.containerUuid) { + const container = await services.containerService.get(process.containerUuid, false); + dispatch(updateResources([container])); + } + return process; + } catch (e) { + throw new Error("Could not resume the process."); + } +}; + +export const startWorkflow = (uuid: string) => async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { + try { + const process = await services.containerRequestService.update(uuid, { state: ContainerRequestState.COMMITTED }); + if (process) { + dispatch(updateResources([process])); + dispatch(snackbarActions.OPEN_SNACKBAR({ message: "Process started", hideDuration: 2000, kind: SnackbarKind.SUCCESS })); + } else { + dispatch(snackbarActions.OPEN_SNACKBAR({ message: `Failed to start process`, kind: SnackbarKind.ERROR })); + } + } catch (e) { + dispatch(snackbarActions.OPEN_SNACKBAR({ message: `Failed to start process`, kind: SnackbarKind.ERROR })); + } +}; -export const reRunProcess = (processUuid: string, workflowUuid: string) => - (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { +export const reRunProcess = + (processUuid: string, workflowUuid: string) => (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { const process = getResource(processUuid)(getState().resources); const workflows = getState().runProcessPanel.searchWorkflows; const workflow = workflows.find(workflow => workflow.uuid === workflowUuid); if (workflow && process) { const mainWf = getWorkflow(process.mounts[MOUNT_PATH_CWL_WORKFLOW]); - if (mainWf) { mainWf.inputs = getInputs(process); } + if (mainWf) { + mainWf.inputs = getInputs(process); + } const stringifiedDefinition = JSON.stringify(process.mounts[MOUNT_PATH_CWL_WORKFLOW].content); const newWorkflow = { ...workflow, definition: stringifiedDefinition }; - const basicInitialData: RunProcessBasicFormData = { name: `Copy of: ${process.name}`, description: process.description }; + const owner = getResource(workflow.ownerUuid)(getState().resources); + const basicInitialData: RunProcessBasicFormData = { name: `Copy of: ${process.name}`, description: process.description, owner }; dispatch(initialize(RUN_PROCESS_BASIC_FORM, basicInitialData)); const advancedInitialData: RunProcessAdvancedFormData = { @@ -69,7 +183,7 @@ export const reRunProcess = (processUuid: string, workflowUuid: string) => ram: process.runtimeConstraints.ram, vcpus: process.runtimeConstraints.vcpus, keep_cache_ram: process.runtimeConstraints.keep_cache_ram, - acr_container_image: process.containerImage + acr_container_image: process.containerImage, }; dispatch(initialize(RUN_PROCESS_ADVANCED_FORM, advancedInitialData)); @@ -82,41 +196,130 @@ export const reRunProcess = (processUuid: string, workflowUuid: string) => } }; -const getInputs = (data: any) => { - if (!data || !data.mounts || !data.mounts[MOUNT_PATH_CWL_WORKFLOW]) { return []; } +/* + * Fetches raw inputs from containerRequest mounts with fallback to properties + * Returns undefined if containerRequest not loaded + * Returns {} if inputs not found in mounts or props + */ +export const getRawInputs = (data: any): WorkflowInputsData | undefined => { + if (!data) { + return undefined; + } + const mountInput = data.mounts?.[MOUNT_PATH_CWL_INPUT]?.content; + const propsInput = data.properties?.cwl_input; + if (!mountInput && !propsInput) { + return {}; + } + return mountInput || propsInput; +}; + +export const getInputs = (data: any): CommandInputParameter[] => { + // Definitions from mounts are needed so we return early if missing + if (!data || !data.mounts || !data.mounts[MOUNT_PATH_CWL_WORKFLOW]) { + return []; + } + const content = getRawInputs(data) as any; + // Only escape if content is falsy to allow displaying definitions if no inputs are present + // (Don't check raw content length) + if (!content) { + return []; + } + const inputs = getWorkflowInputs(data.mounts[MOUNT_PATH_CWL_WORKFLOW].content); - return inputs ? inputs.map( - (it: any) => ( - { - type: it.type, - id: it.id, - label: it.label, - default: data.mounts[MOUNT_PATH_CWL_INPUT].content[it.id], - doc: it.doc - } - ) - ) : []; + return inputs + ? inputs.map((it: any) => ({ + type: it.type, + id: it.id, + label: it.label, + default: content[it.id], + value: content[it.id.split("/").pop()] || [], + doc: it.doc, + })) + : []; }; -export const openRemoveProcessDialog = (uuid: string) => - (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { - dispatch(dialogActions.OPEN_DIALOG({ - id: REMOVE_PROCESS_DIALOG, - data: { - title: 'Remove process permanently', - text: 'Are you sure you want to remove this process?', - confirmButtonLabel: 'Remove', - uuid - } +/* + * Fetches raw outputs from containerRequest properties + * Assumes containerRequest is loaded + */ +export const getRawOutputs = (data: any): CommandInputParameter[] | undefined => { + if (!data || !data.properties || !data.properties.cwl_output) { + return undefined; + } + return data.properties.cwl_output; +}; + +export type InputCollectionMount = { + path: string; + pdh: string; +}; + +export const getInputCollectionMounts = (data: any): InputCollectionMount[] => { + if (!data || !data.mounts) { + return []; + } + return Object.keys(data.mounts) + .map(key => ({ + ...data.mounts[key], + path: key, + })) + .filter(mount => mount.kind === "collection" && mount.portable_data_hash && mount.path) + .map(mount => ({ + path: mount.path, + pdh: mount.portable_data_hash, })); +}; + +export const getOutputParameters = (data: any): CommandOutputParameter[] => { + if (!data || !data.mounts || !data.mounts[MOUNT_PATH_CWL_WORKFLOW]) { + return []; + } + const outputs = getWorkflowOutputs(data.mounts[MOUNT_PATH_CWL_WORKFLOW].content); + return outputs + ? outputs.map((it: any) => ({ + type: it.type, + id: it.id, + label: it.label, + doc: it.doc, + })) + : []; +}; + +export const openRemoveProcessDialog = + (uuid: string, numOfProcesses: Number) => (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { + const confirmationText = + numOfProcesses === 1 + ? "Are you sure you want to remove this process?" + : `Are you sure you want to remove these ${numOfProcesses} processes?`; + const titleText = numOfProcesses === 1 ? "Remove process permanently" : "Remove processes permanently"; + + dispatch( + dialogActions.OPEN_DIALOG({ + id: REMOVE_PROCESS_DIALOG, + data: { + title: titleText, + text: confirmationText, + confirmButtonLabel: "Remove", + uuid, + }, + }) + ); }; -export const REMOVE_PROCESS_DIALOG = 'removeProcessDialog'; +export const REMOVE_PROCESS_DIALOG = "removeProcessDialog"; -export const removeProcessPermanently = (uuid: string) => - async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { - dispatch(snackbarActions.OPEN_SNACKBAR({ message: 'Removing ...', kind: SnackbarKind.INFO })); - await services.containerRequestService.delete(uuid); +export const removeProcessPermanently = (uuid: string) => async (dispatch: Dispatch, getState: () => RootState, services: ServiceRepository) => { + const checkedList = getState().multiselect.checkedList; + const uuidsToRemove: string[] = selectedToArray(checkedList); + + const processesToRemove = uuidsToRemove + .map(uuid => getResource(uuid)(getState().resources) as Resource) + .filter(resource => resource.kind === ResourceKind.PROCESS); + + for (const process of processesToRemove) { + dispatch(snackbarActions.OPEN_SNACKBAR({ message: "Removing ...", kind: SnackbarKind.INFO })); + await services.containerRequestService.delete(process.uuid); dispatch(projectPanelActions.REQUEST_ITEMS()); - dispatch(snackbarActions.OPEN_SNACKBAR({ message: 'Removed.', hideDuration: 2000, kind: SnackbarKind.SUCCESS })); - }; + dispatch(snackbarActions.OPEN_SNACKBAR({ message: "Removed.", hideDuration: 2000, kind: SnackbarKind.SUCCESS })); + } +};