X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/1746985ec50d72cad304640f1ea39e2a9dff07bf..927d62b545e90676bf4729b6c1ebee56d51eacbe:/sdk/cwl/arvados_cwl/arvworkflow.py diff --git a/sdk/cwl/arvados_cwl/arvworkflow.py b/sdk/cwl/arvados_cwl/arvworkflow.py index 3c60ac9fd5..c6bcd04776 100644 --- a/sdk/cwl/arvados_cwl/arvworkflow.py +++ b/sdk/cwl/arvados_cwl/arvworkflow.py @@ -174,7 +174,8 @@ class ArvadosWorkflow(Workflow): raise WorkflowException("%s object must have 'id'" % (self.tool["class"])) document_loader, workflowobj, uri = (self.doc_loader, self.doc_loader.fetch(self.tool["id"]), self.tool["id"]) - discover_secondary_files(self.tool["inputs"], joborder) + discover_secondary_files(self.arvrunner.fs_access, builder, + self.tool["inputs"], joborder) with Perf(metrics, "subworkflow upload_deps"): upload_dependencies(self.arvrunner,