X-Git-Url: https://git.arvados.org/arvados.git/blobdiff_plain/1130ddc26fde448423404b4860d650a43e981e25..1885991dd79a75034f7650cccef16ebe3fd71959:/services/crunch-dispatch-slurm/crunch-dispatch-slurm.go diff --git a/services/crunch-dispatch-slurm/crunch-dispatch-slurm.go b/services/crunch-dispatch-slurm/crunch-dispatch-slurm.go index d84d461c30..cca8b3f150 100644 --- a/services/crunch-dispatch-slurm/crunch-dispatch-slurm.go +++ b/services/crunch-dispatch-slurm/crunch-dispatch-slurm.go @@ -149,14 +149,22 @@ func checkSqueueForOrphans(dispatcher *dispatch.Dispatcher, sqCheck *SqueueCheck // sbatchCmd func sbatchFunc(container arvados.Container) *exec.Cmd { - memPerCPU := math.Ceil(float64(container.RuntimeConstraints.RAM) / (float64(container.RuntimeConstraints.VCPUs) * 1048576)) + mem := int64(math.Ceil(float64(container.RuntimeConstraints.RAM+container.RuntimeConstraints.KeepCacheRAM) / float64(1048576))) + + var disk int64 + for _, m := range container.Mounts { + if m.Kind == "tmp" { + disk += m.Capacity + } + } + disk = int64(math.Ceil(float64(disk) / float64(1048576))) var sbatchArgs []string - sbatchArgs = append(sbatchArgs, "--share") sbatchArgs = append(sbatchArgs, theConfig.SbatchArguments...) sbatchArgs = append(sbatchArgs, fmt.Sprintf("--job-name=%s", container.UUID)) - sbatchArgs = append(sbatchArgs, fmt.Sprintf("--mem-per-cpu=%d", int(memPerCPU))) + sbatchArgs = append(sbatchArgs, fmt.Sprintf("--mem=%d", mem)) sbatchArgs = append(sbatchArgs, fmt.Sprintf("--cpus-per-task=%d", container.RuntimeConstraints.VCPUs)) + sbatchArgs = append(sbatchArgs, fmt.Sprintf("--tmp=%d", disk)) if len(container.SchedulingParameters.Partitions) > 0 { sbatchArgs = append(sbatchArgs, fmt.Sprintf("--partition=%s", strings.Join(container.SchedulingParameters.Partitions, ","))) }