remove trailing white space from all files
[arvados.git] / sdk / R / R / Arvados.R
index 0ec2d115295749067ceb4ee105245aad73df149f..4b65546912393b52b4e05a4d1ecd21b83f44bd28 100644 (file)
@@ -3,9 +3,9 @@
 # SPDX-License-Identifier: Apache-2.0
 
 #' users.get
-#' 
+#'
 #' users.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.get(uuid)
 #' @param uuid The UUID of the User in question.
 #' @return User object.
@@ -13,9 +13,9 @@
 NULL
 
 #' users.create
-#' 
+#'
 #' users.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.create(user, ensure_unique_name = "false")
 #' @param user User object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -24,9 +24,9 @@ NULL
 NULL
 
 #' users.update
-#' 
+#'
 #' users.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.update(user, uuid)
 #' @param user User object.
 #' @param uuid The UUID of the User in question.
@@ -35,9 +35,9 @@ NULL
 NULL
 
 #' users.delete
-#' 
+#'
 #' users.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.delete(uuid)
 #' @param uuid The UUID of the User in question.
 #' @return User object.
@@ -45,93 +45,93 @@ NULL
 NULL
 
 #' users.current
-#' 
+#'
 #' users.current is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.current(NULL)
 #' @return User object.
 #' @name users.current
 NULL
 
 #' users.system
-#' 
+#'
 #' users.system is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.system(NULL)
 #' @return User object.
 #' @name users.system
 NULL
 
 #' users.activate
-#' 
+#'
 #' users.activate is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.activate(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return User object.
 #' @name users.activate
 NULL
 
 #' users.setup
-#' 
+#'
 #' users.setup is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.setup(user = NULL, openid_prefix = NULL,
 #'     repo_name = NULL, vm_uuid = NULL, send_notification_email = "false")
-#' @param user 
-#' @param openid_prefix 
-#' @param repo_name 
-#' @param vm_uuid 
-#' @param send_notification_email 
+#' @param user
+#' @param openid_prefix
+#' @param repo_name
+#' @param vm_uuid
+#' @param send_notification_email
 #' @return User object.
 #' @name users.setup
 NULL
 
 #' users.unsetup
-#' 
+#'
 #' users.unsetup is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.unsetup(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return User object.
 #' @name users.unsetup
 NULL
 
 #' users.update_uuid
-#' 
+#'
 #' users.update_uuid is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.update_uuid(uuid, new_uuid)
-#' @param uuid 
-#' @param new_uuid 
+#' @param uuid
+#' @param new_uuid
 #' @return User object.
 #' @name users.update_uuid
 NULL
 
 #' users.list
-#' 
+#'
 #' users.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$users.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return UserList object.
 #' @name users.list
 NULL
 
 #' api_client_authorizations.get
-#' 
+#'
 #' api_client_authorizations.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_client_authorizations.get(uuid)
 #' @param uuid The UUID of the ApiClientAuthorization in question.
 #' @return ApiClientAuthorization object.
@@ -139,9 +139,9 @@ NULL
 NULL
 
 #' api_client_authorizations.create
-#' 
+#'
 #' api_client_authorizations.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_client_authorizations.create(apiclientauthorization,
 #'     ensure_unique_name = "false")
 #' @param apiClientAuthorization ApiClientAuthorization object.
@@ -151,9 +151,9 @@ NULL
 NULL
 
 #' api_client_authorizations.update
-#' 
+#'
 #' api_client_authorizations.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_client_authorizations.update(apiclientauthorization,
 #'     uuid)
 #' @param apiClientAuthorization ApiClientAuthorization object.
@@ -163,9 +163,9 @@ NULL
 NULL
 
 #' api_client_authorizations.delete
-#' 
+#'
 #' api_client_authorizations.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_client_authorizations.delete(uuid)
 #' @param uuid The UUID of the ApiClientAuthorization in question.
 #' @return ApiClientAuthorization object.
@@ -173,50 +173,50 @@ NULL
 NULL
 
 #' api_client_authorizations.create_system_auth
-#' 
+#'
 #' api_client_authorizations.create_system_auth is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_client_authorizations.create_system_auth(api_client_id = NULL,
 #'     scopes = NULL)
-#' @param api_client_id 
-#' @param scopes 
+#' @param api_client_id
+#' @param scopes
 #' @return ApiClientAuthorization object.
 #' @name api_client_authorizations.create_system_auth
 NULL
 
 #' api_client_authorizations.current
-#' 
+#'
 #' api_client_authorizations.current is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_client_authorizations.current(NULL)
 #' @return ApiClientAuthorization object.
 #' @name api_client_authorizations.current
 NULL
 
 #' api_client_authorizations.list
-#' 
+#'
 #' api_client_authorizations.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_client_authorizations.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return ApiClientAuthorizationList object.
 #' @name api_client_authorizations.list
 NULL
 
 #' containers.get
-#' 
+#'
 #' containers.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$containers.get(uuid)
 #' @param uuid The UUID of the Container in question.
 #' @return Container object.
@@ -224,9 +224,9 @@ NULL
 NULL
 
 #' containers.create
-#' 
+#'
 #' containers.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$containers.create(container,
 #'     ensure_unique_name = "false")
 #' @param container Container object.
@@ -236,9 +236,9 @@ NULL
 NULL
 
 #' containers.update
-#' 
+#'
 #' containers.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$containers.update(container,
 #'     uuid)
 #' @param container Container object.
@@ -248,9 +248,9 @@ NULL
 NULL
 
 #' containers.delete
-#' 
+#'
 #' containers.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$containers.delete(uuid)
 #' @param uuid The UUID of the Container in question.
 #' @return Container object.
@@ -258,78 +258,78 @@ NULL
 NULL
 
 #' containers.auth
-#' 
+#'
 #' containers.auth is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$containers.auth(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Container object.
 #' @name containers.auth
 NULL
 
 #' containers.lock
-#' 
+#'
 #' containers.lock is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$containers.lock(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Container object.
 #' @name containers.lock
 NULL
 
 #' containers.unlock
-#' 
+#'
 #' containers.unlock is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$containers.unlock(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Container object.
 #' @name containers.unlock
 NULL
 
 #' containers.secret_mounts
-#' 
+#'
 #' containers.secret_mounts is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$containers.secret_mounts(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Container object.
 #' @name containers.secret_mounts
 NULL
 
 #' containers.current
-#' 
+#'
 #' containers.current is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$containers.current(NULL)
 #' @return Container object.
 #' @name containers.current
 NULL
 
 #' containers.list
-#' 
+#'
 #' containers.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$containers.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return ContainerList object.
 #' @name containers.list
 NULL
 
 #' api_clients.get
-#' 
+#'
 #' api_clients.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_clients.get(uuid)
 #' @param uuid The UUID of the ApiClient in question.
 #' @return ApiClient object.
@@ -337,9 +337,9 @@ NULL
 NULL
 
 #' api_clients.create
-#' 
+#'
 #' api_clients.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_clients.create(apiclient,
 #'     ensure_unique_name = "false")
 #' @param apiClient ApiClient object.
@@ -349,9 +349,9 @@ NULL
 NULL
 
 #' api_clients.update
-#' 
+#'
 #' api_clients.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_clients.update(apiclient,
 #'     uuid)
 #' @param apiClient ApiClient object.
@@ -361,9 +361,9 @@ NULL
 NULL
 
 #' api_clients.delete
-#' 
+#'
 #' api_clients.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_clients.delete(uuid)
 #' @param uuid The UUID of the ApiClient in question.
 #' @return ApiClient object.
@@ -371,29 +371,29 @@ NULL
 NULL
 
 #' api_clients.list
-#' 
+#'
 #' api_clients.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$api_clients.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return ApiClientList object.
 #' @name api_clients.list
 NULL
 
 #' authorized_keys.get
-#' 
+#'
 #' authorized_keys.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$authorized_keys.get(uuid)
 #' @param uuid The UUID of the AuthorizedKey in question.
 #' @return AuthorizedKey object.
@@ -401,9 +401,9 @@ NULL
 NULL
 
 #' authorized_keys.create
-#' 
+#'
 #' authorized_keys.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$authorized_keys.create(authorizedkey,
 #'     ensure_unique_name = "false")
 #' @param authorizedKey AuthorizedKey object.
@@ -413,9 +413,9 @@ NULL
 NULL
 
 #' authorized_keys.update
-#' 
+#'
 #' authorized_keys.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$authorized_keys.update(authorizedkey,
 #'     uuid)
 #' @param authorizedKey AuthorizedKey object.
@@ -425,9 +425,9 @@ NULL
 NULL
 
 #' authorized_keys.delete
-#' 
+#'
 #' authorized_keys.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$authorized_keys.delete(uuid)
 #' @param uuid The UUID of the AuthorizedKey in question.
 #' @return AuthorizedKey object.
@@ -435,29 +435,29 @@ NULL
 NULL
 
 #' authorized_keys.list
-#' 
+#'
 #' authorized_keys.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$authorized_keys.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return AuthorizedKeyList object.
 #' @name authorized_keys.list
 NULL
 
 #' container_requests.get
-#' 
+#'
 #' container_requests.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$container_requests.get(uuid)
 #' @param uuid The UUID of the ContainerRequest in question.
 #' @return ContainerRequest object.
@@ -465,9 +465,9 @@ NULL
 NULL
 
 #' container_requests.create
-#' 
+#'
 #' container_requests.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$container_requests.create(containerrequest,
 #'     ensure_unique_name = "false")
 #' @param containerRequest ContainerRequest object.
@@ -477,9 +477,9 @@ NULL
 NULL
 
 #' container_requests.update
-#' 
+#'
 #' container_requests.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$container_requests.update(containerrequest,
 #'     uuid)
 #' @param containerRequest ContainerRequest object.
@@ -489,9 +489,9 @@ NULL
 NULL
 
 #' container_requests.delete
-#' 
+#'
 #' container_requests.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$container_requests.delete(uuid)
 #' @param uuid The UUID of the ContainerRequest in question.
 #' @return ContainerRequest object.
@@ -499,29 +499,29 @@ NULL
 NULL
 
 #' container_requests.list
-#' 
+#'
 #' container_requests.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$container_requests.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return ContainerRequestList object.
 #' @name container_requests.list
 NULL
 
 #' collections.get
-#' 
+#'
 #' collections.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$collections.get(uuid)
 #' @param uuid The UUID of the Collection in question.
 #' @return Collection object.
@@ -529,9 +529,9 @@ NULL
 NULL
 
 #' collections.create
-#' 
+#'
 #' collections.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$collections.create(collection,
 #'     ensure_unique_name = "false")
 #' @param collection Collection object.
@@ -541,9 +541,9 @@ NULL
 NULL
 
 #' collections.update
-#' 
+#'
 #' collections.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$collections.update(collection,
 #'     uuid)
 #' @param collection Collection object.
@@ -553,9 +553,9 @@ NULL
 NULL
 
 #' collections.delete
-#' 
+#'
 #' collections.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$collections.delete(uuid)
 #' @param uuid The UUID of the Collection in question.
 #' @return Collection object.
@@ -563,70 +563,70 @@ NULL
 NULL
 
 #' collections.provenance
-#' 
+#'
 #' collections.provenance is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$collections.provenance(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Collection object.
 #' @name collections.provenance
 NULL
 
 #' collections.used_by
-#' 
+#'
 #' collections.used_by is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$collections.used_by(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Collection object.
 #' @name collections.used_by
 NULL
 
 #' collections.trash
-#' 
+#'
 #' collections.trash is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$collections.trash(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Collection object.
 #' @name collections.trash
 NULL
 
 #' collections.untrash
-#' 
+#'
 #' collections.untrash is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$collections.untrash(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Collection object.
 #' @name collections.untrash
 NULL
 
 #' collections.list
-#' 
+#'
 #' collections.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$collections.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact", include_trash = NULL)
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @param include_trash Include collections whose is_trashed attribute is true.
 #' @return CollectionList object.
 #' @name collections.list
 NULL
 
 #' humans.get
-#' 
+#'
 #' humans.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$humans.get(uuid)
 #' @param uuid The UUID of the Human in question.
 #' @return Human object.
@@ -634,9 +634,9 @@ NULL
 NULL
 
 #' humans.create
-#' 
+#'
 #' humans.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$humans.create(human, ensure_unique_name = "false")
 #' @param human Human object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -645,9 +645,9 @@ NULL
 NULL
 
 #' humans.update
-#' 
+#'
 #' humans.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$humans.update(human, uuid)
 #' @param human Human object.
 #' @param uuid The UUID of the Human in question.
@@ -656,9 +656,9 @@ NULL
 NULL
 
 #' humans.delete
-#' 
+#'
 #' humans.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$humans.delete(uuid)
 #' @param uuid The UUID of the Human in question.
 #' @return Human object.
@@ -666,29 +666,29 @@ NULL
 NULL
 
 #' humans.list
-#' 
+#'
 #' humans.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$humans.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return HumanList object.
 #' @name humans.list
 NULL
 
 #' job_tasks.get
-#' 
+#'
 #' job_tasks.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$job_tasks.get(uuid)
 #' @param uuid The UUID of the JobTask in question.
 #' @return JobTask object.
@@ -696,9 +696,9 @@ NULL
 NULL
 
 #' job_tasks.create
-#' 
+#'
 #' job_tasks.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$job_tasks.create(jobtask, ensure_unique_name = "false")
 #' @param jobTask JobTask object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -707,9 +707,9 @@ NULL
 NULL
 
 #' job_tasks.update
-#' 
+#'
 #' job_tasks.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$job_tasks.update(jobtask, uuid)
 #' @param jobTask JobTask object.
 #' @param uuid The UUID of the JobTask in question.
@@ -718,9 +718,9 @@ NULL
 NULL
 
 #' job_tasks.delete
-#' 
+#'
 #' job_tasks.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$job_tasks.delete(uuid)
 #' @param uuid The UUID of the JobTask in question.
 #' @return JobTask object.
@@ -728,29 +728,29 @@ NULL
 NULL
 
 #' job_tasks.list
-#' 
+#'
 #' job_tasks.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$job_tasks.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return JobTaskList object.
 #' @name job_tasks.list
 NULL
 
 #' links.get
-#' 
+#'
 #' links.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$links.get(uuid)
 #' @param uuid The UUID of the Link in question.
 #' @return Link object.
@@ -758,9 +758,9 @@ NULL
 NULL
 
 #' links.create
-#' 
+#'
 #' links.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$links.create(link, ensure_unique_name = "false")
 #' @param link Link object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -769,9 +769,9 @@ NULL
 NULL
 
 #' links.update
-#' 
+#'
 #' links.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$links.update(link, uuid)
 #' @param link Link object.
 #' @param uuid The UUID of the Link in question.
@@ -780,9 +780,9 @@ NULL
 NULL
 
 #' links.delete
-#' 
+#'
 #' links.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$links.delete(uuid)
 #' @param uuid The UUID of the Link in question.
 #' @return Link object.
@@ -790,39 +790,39 @@ NULL
 NULL
 
 #' links.list
-#' 
+#'
 #' links.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$links.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return LinkList object.
 #' @name links.list
 NULL
 
 #' links.get_permissions
-#' 
+#'
 #' links.get_permissions is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$links.get_permissions(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Link object.
 #' @name links.get_permissions
 NULL
 
 #' jobs.get
-#' 
+#'
 #' jobs.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$jobs.get(uuid)
 #' @param uuid The UUID of the Job in question.
 #' @return Job object.
@@ -830,26 +830,26 @@ NULL
 NULL
 
 #' jobs.create
-#' 
+#'
 #' jobs.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$jobs.create(job, ensure_unique_name = "false",
 #'     find_or_create = "false", filters = NULL,
 #'     minimum_script_version = NULL, exclude_script_versions = NULL)
 #' @param job Job object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
-#' @param find_or_create 
-#' @param filters 
-#' @param minimum_script_version 
-#' @param exclude_script_versions 
+#' @param find_or_create
+#' @param filters
+#' @param minimum_script_version
+#' @param exclude_script_versions
 #' @return Job object.
 #' @name jobs.create
 NULL
 
 #' jobs.update
-#' 
+#'
 #' jobs.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$jobs.update(job, uuid)
 #' @param job Job object.
 #' @param uuid The UUID of the Job in question.
@@ -858,9 +858,9 @@ NULL
 NULL
 
 #' jobs.delete
-#' 
+#'
 #' jobs.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$jobs.delete(uuid)
 #' @param uuid The UUID of the Job in question.
 #' @return Job object.
@@ -868,77 +868,77 @@ NULL
 NULL
 
 #' jobs.queue
-#' 
+#'
 #' jobs.queue is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$jobs.queue(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return Job object.
 #' @name jobs.queue
 NULL
 
 #' jobs.queue_size
-#' 
+#'
 #' jobs.queue_size is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$jobs.queue_size(NULL)
 #' @return Job object.
 #' @name jobs.queue_size
 NULL
 
 #' jobs.cancel
-#' 
+#'
 #' jobs.cancel is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$jobs.cancel(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Job object.
 #' @name jobs.cancel
 NULL
 
 #' jobs.lock
-#' 
+#'
 #' jobs.lock is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$jobs.lock(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Job object.
 #' @name jobs.lock
 NULL
 
 #' jobs.list
-#' 
+#'
 #' jobs.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$jobs.list(filters = NULL, where = NULL,
 #'     order = NULL, select = NULL, distinct = NULL,
 #'     limit = "100", offset = "0", count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return JobList object.
 #' @name jobs.list
 NULL
 
 #' keep_disks.get
-#' 
+#'
 #' keep_disks.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_disks.get(uuid)
 #' @param uuid The UUID of the KeepDisk in question.
 #' @return KeepDisk object.
@@ -946,9 +946,9 @@ NULL
 NULL
 
 #' keep_disks.create
-#' 
+#'
 #' keep_disks.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_disks.create(keepdisk,
 #'     ensure_unique_name = "false")
 #' @param keepDisk KeepDisk object.
@@ -958,9 +958,9 @@ NULL
 NULL
 
 #' keep_disks.update
-#' 
+#'
 #' keep_disks.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_disks.update(keepdisk,
 #'     uuid)
 #' @param keepDisk KeepDisk object.
@@ -970,9 +970,9 @@ NULL
 NULL
 
 #' keep_disks.delete
-#' 
+#'
 #' keep_disks.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_disks.delete(uuid)
 #' @param uuid The UUID of the KeepDisk in question.
 #' @return KeepDisk object.
@@ -980,47 +980,47 @@ NULL
 NULL
 
 #' keep_disks.ping
-#' 
+#'
 #' keep_disks.ping is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_disks.ping(uuid = NULL,
 #'     ping_secret, node_uuid = NULL, filesystem_uuid = NULL,
 #'     service_host = NULL, service_port, service_ssl_flag)
-#' @param uuid 
-#' @param ping_secret 
-#' @param node_uuid 
-#' @param filesystem_uuid 
-#' @param service_host 
-#' @param service_port 
-#' @param service_ssl_flag 
+#' @param uuid
+#' @param ping_secret
+#' @param node_uuid
+#' @param filesystem_uuid
+#' @param service_host
+#' @param service_port
+#' @param service_ssl_flag
 #' @return KeepDisk object.
 #' @name keep_disks.ping
 NULL
 
 #' keep_disks.list
-#' 
+#'
 #' keep_disks.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_disks.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return KeepDiskList object.
 #' @name keep_disks.list
 NULL
 
 #' keep_services.get
-#' 
+#'
 #' keep_services.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_services.get(uuid)
 #' @param uuid The UUID of the KeepService in question.
 #' @return KeepService object.
@@ -1028,9 +1028,9 @@ NULL
 NULL
 
 #' keep_services.create
-#' 
+#'
 #' keep_services.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_services.create(keepservice,
 #'     ensure_unique_name = "false")
 #' @param keepService KeepService object.
@@ -1040,9 +1040,9 @@ NULL
 NULL
 
 #' keep_services.update
-#' 
+#'
 #' keep_services.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_services.update(keepservice,
 #'     uuid)
 #' @param keepService KeepService object.
@@ -1052,9 +1052,9 @@ NULL
 NULL
 
 #' keep_services.delete
-#' 
+#'
 #' keep_services.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_services.delete(uuid)
 #' @param uuid The UUID of the KeepService in question.
 #' @return KeepService object.
@@ -1062,38 +1062,38 @@ NULL
 NULL
 
 #' keep_services.accessible
-#' 
+#'
 #' keep_services.accessible is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_services.accessible(NULL)
 #' @return KeepService object.
 #' @name keep_services.accessible
 NULL
 
 #' keep_services.list
-#' 
+#'
 #' keep_services.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$keep_services.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return KeepServiceList object.
 #' @name keep_services.list
 NULL
 
 #' pipeline_templates.get
-#' 
+#'
 #' pipeline_templates.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_templates.get(uuid)
 #' @param uuid The UUID of the PipelineTemplate in question.
 #' @return PipelineTemplate object.
@@ -1101,9 +1101,9 @@ NULL
 NULL
 
 #' pipeline_templates.create
-#' 
+#'
 #' pipeline_templates.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_templates.create(pipelinetemplate,
 #'     ensure_unique_name = "false")
 #' @param pipelineTemplate PipelineTemplate object.
@@ -1113,9 +1113,9 @@ NULL
 NULL
 
 #' pipeline_templates.update
-#' 
+#'
 #' pipeline_templates.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_templates.update(pipelinetemplate,
 #'     uuid)
 #' @param pipelineTemplate PipelineTemplate object.
@@ -1125,9 +1125,9 @@ NULL
 NULL
 
 #' pipeline_templates.delete
-#' 
+#'
 #' pipeline_templates.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_templates.delete(uuid)
 #' @param uuid The UUID of the PipelineTemplate in question.
 #' @return PipelineTemplate object.
@@ -1135,29 +1135,29 @@ NULL
 NULL
 
 #' pipeline_templates.list
-#' 
+#'
 #' pipeline_templates.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_templates.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return PipelineTemplateList object.
 #' @name pipeline_templates.list
 NULL
 
 #' pipeline_instances.get
-#' 
+#'
 #' pipeline_instances.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_instances.get(uuid)
 #' @param uuid The UUID of the PipelineInstance in question.
 #' @return PipelineInstance object.
@@ -1165,9 +1165,9 @@ NULL
 NULL
 
 #' pipeline_instances.create
-#' 
+#'
 #' pipeline_instances.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_instances.create(pipelineinstance,
 #'     ensure_unique_name = "false")
 #' @param pipelineInstance PipelineInstance object.
@@ -1177,9 +1177,9 @@ NULL
 NULL
 
 #' pipeline_instances.update
-#' 
+#'
 #' pipeline_instances.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_instances.update(pipelineinstance,
 #'     uuid)
 #' @param pipelineInstance PipelineInstance object.
@@ -1189,9 +1189,9 @@ NULL
 NULL
 
 #' pipeline_instances.delete
-#' 
+#'
 #' pipeline_instances.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_instances.delete(uuid)
 #' @param uuid The UUID of the PipelineInstance in question.
 #' @return PipelineInstance object.
@@ -1199,39 +1199,39 @@ NULL
 NULL
 
 #' pipeline_instances.cancel
-#' 
+#'
 #' pipeline_instances.cancel is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_instances.cancel(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return PipelineInstance object.
 #' @name pipeline_instances.cancel
 NULL
 
 #' pipeline_instances.list
-#' 
+#'
 #' pipeline_instances.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$pipeline_instances.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return PipelineInstanceList object.
 #' @name pipeline_instances.list
 NULL
 
 #' nodes.get
-#' 
+#'
 #' nodes.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$nodes.get(uuid)
 #' @param uuid The UUID of the Node in question.
 #' @return Node object.
@@ -1239,9 +1239,9 @@ NULL
 NULL
 
 #' nodes.create
-#' 
+#'
 #' nodes.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$nodes.create(node, ensure_unique_name = "false",
 #'     assign_slot = NULL)
 #' @param node Node object.
@@ -1252,9 +1252,9 @@ NULL
 NULL
 
 #' nodes.update
-#' 
+#'
 #' nodes.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$nodes.update(node, uuid, assign_slot = NULL)
 #' @param node Node object.
 #' @param uuid The UUID of the Node in question.
@@ -1264,9 +1264,9 @@ NULL
 NULL
 
 #' nodes.delete
-#' 
+#'
 #' nodes.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$nodes.delete(uuid)
 #' @param uuid The UUID of the Node in question.
 #' @return Node object.
@@ -1274,40 +1274,40 @@ NULL
 NULL
 
 #' nodes.ping
-#' 
+#'
 #' nodes.ping is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$nodes.ping(uuid, ping_secret)
-#' @param uuid 
-#' @param ping_secret 
+#' @param uuid
+#' @param ping_secret
 #' @return Node object.
 #' @name nodes.ping
 NULL
 
 #' nodes.list
-#' 
+#'
 #' nodes.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$nodes.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return NodeList object.
 #' @name nodes.list
 NULL
 
 #' repositories.get
-#' 
+#'
 #' repositories.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$repositories.get(uuid)
 #' @param uuid The UUID of the Repository in question.
 #' @return Repository object.
@@ -1315,9 +1315,9 @@ NULL
 NULL
 
 #' repositories.create
-#' 
+#'
 #' repositories.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$repositories.create(repository,
 #'     ensure_unique_name = "false")
 #' @param repository Repository object.
@@ -1327,9 +1327,9 @@ NULL
 NULL
 
 #' repositories.update
-#' 
+#'
 #' repositories.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$repositories.update(repository,
 #'     uuid)
 #' @param repository Repository object.
@@ -1339,9 +1339,9 @@ NULL
 NULL
 
 #' repositories.delete
-#' 
+#'
 #' repositories.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$repositories.delete(uuid)
 #' @param uuid The UUID of the Repository in question.
 #' @return Repository object.
@@ -1349,38 +1349,38 @@ NULL
 NULL
 
 #' repositories.get_all_permissions
-#' 
+#'
 #' repositories.get_all_permissions is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$repositories.get_all_permissions(NULL)
 #' @return Repository object.
 #' @name repositories.get_all_permissions
 NULL
 
 #' repositories.list
-#' 
+#'
 #' repositories.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$repositories.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return RepositoryList object.
 #' @name repositories.list
 NULL
 
 #' specimens.get
-#' 
+#'
 #' specimens.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$specimens.get(uuid)
 #' @param uuid The UUID of the Specimen in question.
 #' @return Specimen object.
@@ -1388,9 +1388,9 @@ NULL
 NULL
 
 #' specimens.create
-#' 
+#'
 #' specimens.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$specimens.create(specimen,
 #'     ensure_unique_name = "false")
 #' @param specimen Specimen object.
@@ -1400,9 +1400,9 @@ NULL
 NULL
 
 #' specimens.update
-#' 
+#'
 #' specimens.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$specimens.update(specimen,
 #'     uuid)
 #' @param specimen Specimen object.
@@ -1412,9 +1412,9 @@ NULL
 NULL
 
 #' specimens.delete
-#' 
+#'
 #' specimens.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$specimens.delete(uuid)
 #' @param uuid The UUID of the Specimen in question.
 #' @return Specimen object.
@@ -1422,29 +1422,29 @@ NULL
 NULL
 
 #' specimens.list
-#' 
+#'
 #' specimens.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$specimens.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return SpecimenList object.
 #' @name specimens.list
 NULL
 
 #' logs.get
-#' 
+#'
 #' logs.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$logs.get(uuid)
 #' @param uuid The UUID of the Log in question.
 #' @return Log object.
@@ -1452,9 +1452,9 @@ NULL
 NULL
 
 #' logs.create
-#' 
+#'
 #' logs.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$logs.create(log, ensure_unique_name = "false")
 #' @param log Log object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -1463,9 +1463,9 @@ NULL
 NULL
 
 #' logs.update
-#' 
+#'
 #' logs.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$logs.update(log, uuid)
 #' @param log Log object.
 #' @param uuid The UUID of the Log in question.
@@ -1474,9 +1474,9 @@ NULL
 NULL
 
 #' logs.delete
-#' 
+#'
 #' logs.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$logs.delete(uuid)
 #' @param uuid The UUID of the Log in question.
 #' @return Log object.
@@ -1484,28 +1484,28 @@ NULL
 NULL
 
 #' logs.list
-#' 
+#'
 #' logs.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$logs.list(filters = NULL, where = NULL,
 #'     order = NULL, select = NULL, distinct = NULL,
 #'     limit = "100", offset = "0", count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return LogList object.
 #' @name logs.list
 NULL
 
 #' traits.get
-#' 
+#'
 #' traits.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$traits.get(uuid)
 #' @param uuid The UUID of the Trait in question.
 #' @return Trait object.
@@ -1513,9 +1513,9 @@ NULL
 NULL
 
 #' traits.create
-#' 
+#'
 #' traits.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$traits.create(trait, ensure_unique_name = "false")
 #' @param trait Trait object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -1524,9 +1524,9 @@ NULL
 NULL
 
 #' traits.update
-#' 
+#'
 #' traits.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$traits.update(trait, uuid)
 #' @param trait Trait object.
 #' @param uuid The UUID of the Trait in question.
@@ -1535,9 +1535,9 @@ NULL
 NULL
 
 #' traits.delete
-#' 
+#'
 #' traits.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$traits.delete(uuid)
 #' @param uuid The UUID of the Trait in question.
 #' @return Trait object.
@@ -1545,29 +1545,29 @@ NULL
 NULL
 
 #' traits.list
-#' 
+#'
 #' traits.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$traits.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return TraitList object.
 #' @name traits.list
 NULL
 
 #' virtual_machines.get
-#' 
+#'
 #' virtual_machines.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$virtual_machines.get(uuid)
 #' @param uuid The UUID of the VirtualMachine in question.
 #' @return VirtualMachine object.
@@ -1575,9 +1575,9 @@ NULL
 NULL
 
 #' virtual_machines.create
-#' 
+#'
 #' virtual_machines.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$virtual_machines.create(virtualmachine,
 #'     ensure_unique_name = "false")
 #' @param virtualMachine VirtualMachine object.
@@ -1587,9 +1587,9 @@ NULL
 NULL
 
 #' virtual_machines.update
-#' 
+#'
 #' virtual_machines.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$virtual_machines.update(virtualmachine,
 #'     uuid)
 #' @param virtualMachine VirtualMachine object.
@@ -1599,9 +1599,9 @@ NULL
 NULL
 
 #' virtual_machines.delete
-#' 
+#'
 #' virtual_machines.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$virtual_machines.delete(uuid)
 #' @param uuid The UUID of the VirtualMachine in question.
 #' @return VirtualMachine object.
@@ -1609,48 +1609,48 @@ NULL
 NULL
 
 #' virtual_machines.logins
-#' 
+#'
 #' virtual_machines.logins is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$virtual_machines.logins(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return VirtualMachine object.
 #' @name virtual_machines.logins
 NULL
 
 #' virtual_machines.get_all_logins
-#' 
+#'
 #' virtual_machines.get_all_logins is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$virtual_machines.get_all_logins(NULL)
 #' @return VirtualMachine object.
 #' @name virtual_machines.get_all_logins
 NULL
 
 #' virtual_machines.list
-#' 
+#'
 #' virtual_machines.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$virtual_machines.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return VirtualMachineList object.
 #' @name virtual_machines.list
 NULL
 
 #' workflows.get
-#' 
+#'
 #' workflows.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$workflows.get(uuid)
 #' @param uuid The UUID of the Workflow in question.
 #' @return Workflow object.
@@ -1658,9 +1658,9 @@ NULL
 NULL
 
 #' workflows.create
-#' 
+#'
 #' workflows.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$workflows.create(workflow,
 #'     ensure_unique_name = "false")
 #' @param workflow Workflow object.
@@ -1670,9 +1670,9 @@ NULL
 NULL
 
 #' workflows.update
-#' 
+#'
 #' workflows.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$workflows.update(workflow,
 #'     uuid)
 #' @param workflow Workflow object.
@@ -1682,9 +1682,9 @@ NULL
 NULL
 
 #' workflows.delete
-#' 
+#'
 #' workflows.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$workflows.delete(uuid)
 #' @param uuid The UUID of the Workflow in question.
 #' @return Workflow object.
@@ -1692,29 +1692,29 @@ NULL
 NULL
 
 #' workflows.list
-#' 
+#'
 #' workflows.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$workflows.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return WorkflowList object.
 #' @name workflows.list
 NULL
 
 #' groups.get
-#' 
+#'
 #' groups.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$groups.get(uuid)
 #' @param uuid The UUID of the Group in question.
 #' @return Group object.
@@ -1722,9 +1722,9 @@ NULL
 NULL
 
 #' groups.create
-#' 
+#'
 #' groups.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$groups.create(group, ensure_unique_name = "false")
 #' @param group Group object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -1733,9 +1733,9 @@ NULL
 NULL
 
 #' groups.update
-#' 
+#'
 #' groups.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$groups.update(group, uuid)
 #' @param group Group object.
 #' @param uuid The UUID of the Group in question.
@@ -1744,9 +1744,9 @@ NULL
 NULL
 
 #' groups.delete
-#' 
+#'
 #' groups.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$groups.delete(uuid)
 #' @param uuid The UUID of the Group in question.
 #' @return Group object.
@@ -1754,72 +1754,72 @@ NULL
 NULL
 
 #' groups.contents
-#' 
+#'
 #' groups.contents is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$groups.contents(filters = NULL,
 #'     where = NULL, order = NULL, distinct = NULL,
 #'     limit = "100", offset = "0", count = "exact",
 #'     include_trash = NULL, uuid = NULL, recursive = NULL)
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @param include_trash Include items whose is_trashed attribute is true.
-#' @param uuid 
+#' @param uuid
 #' @param recursive Include contents from child groups recursively.
 #' @return Group object.
 #' @name groups.contents
 NULL
 
 #' groups.trash
-#' 
+#'
 #' groups.trash is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$groups.trash(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Group object.
 #' @name groups.trash
 NULL
 
 #' groups.untrash
-#' 
+#'
 #' groups.untrash is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$groups.untrash(uuid)
-#' @param uuid 
+#' @param uuid
 #' @return Group object.
 #' @name groups.untrash
 NULL
 
 #' groups.list
-#' 
+#'
 #' groups.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$groups.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact", include_trash = NULL)
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @param include_trash Include items whose is_trashed attribute is true.
 #' @return GroupList object.
 #' @name groups.list
 NULL
 
 #' user_agreements.get
-#' 
+#'
 #' user_agreements.get is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$user_agreements.get(uuid)
 #' @param uuid The UUID of the UserAgreement in question.
 #' @return UserAgreement object.
@@ -1827,9 +1827,9 @@ NULL
 NULL
 
 #' user_agreements.create
-#' 
+#'
 #' user_agreements.create is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$user_agreements.create(useragreement,
 #'     ensure_unique_name = "false")
 #' @param userAgreement UserAgreement object.
@@ -1839,9 +1839,9 @@ NULL
 NULL
 
 #' user_agreements.update
-#' 
+#'
 #' user_agreements.update is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$user_agreements.update(useragreement,
 #'     uuid)
 #' @param userAgreement UserAgreement object.
@@ -1851,9 +1851,9 @@ NULL
 NULL
 
 #' user_agreements.delete
-#' 
+#'
 #' user_agreements.delete is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$user_agreements.delete(uuid)
 #' @param uuid The UUID of the UserAgreement in question.
 #' @return UserAgreement object.
@@ -1861,56 +1861,56 @@ NULL
 NULL
 
 #' user_agreements.signatures
-#' 
+#'
 #' user_agreements.signatures is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$user_agreements.signatures(NULL)
 #' @return UserAgreement object.
 #' @name user_agreements.signatures
 NULL
 
 #' user_agreements.sign
-#' 
+#'
 #' user_agreements.sign is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$user_agreements.sign(NULL)
 #' @return UserAgreement object.
 #' @name user_agreements.sign
 NULL
 
 #' user_agreements.list
-#' 
+#'
 #' user_agreements.list is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$user_agreements.list(filters = NULL,
 #'     where = NULL, order = NULL, select = NULL,
 #'     distinct = NULL, limit = "100", offset = "0",
 #'     count = "exact")
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param select 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param select
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @return UserAgreementList object.
 #' @name user_agreements.list
 NULL
 
 #' user_agreements.new
-#' 
+#'
 #' user_agreements.new is a method defined in Arvados class.
-#' 
+#'
 #' @usage arv$user_agreements.new(NULL)
 #' @return UserAgreement object.
 #' @name user_agreements.new
 NULL
 
 #' project.get
-#' 
+#'
 #' projects.get is equivalent to groups.get method.
-#' 
+#'
 #' @usage arv$projects.get(uuid)
 #' @param uuid The UUID of the Group in question.
 #' @return Group object.
@@ -1918,9 +1918,9 @@ NULL
 NULL
 
 #' project.create
-#' 
+#'
 #' projects.create wrapps groups.create method by setting group_class attribute to "project".
-#' 
+#'
 #' @usage arv$projects.create(group, ensure_unique_name = "false")
 #' @param group Group object.
 #' @param ensure_unique_name Adjust name to ensure uniqueness instead of returning an error on (owner_uuid, name) collision.
@@ -1929,9 +1929,9 @@ NULL
 NULL
 
 #' project.update
-#' 
+#'
 #' projects.update wrapps groups.update method by setting group_class attribute to "project".
-#' 
+#'
 #' @usage arv$projects.update(group, uuid)
 #' @param group Group object.
 #' @param uuid The UUID of the Group in question.
@@ -1940,9 +1940,9 @@ NULL
 NULL
 
 #' project.delete
-#' 
+#'
 #' projects.delete is equivalent to groups.delete method.
-#' 
+#'
 #' @usage arv$project.delete(uuid)
 #' @param uuid The UUID of the Group in question.
 #' @return Group object.
@@ -1950,22 +1950,22 @@ NULL
 NULL
 
 #' project.list
-#' 
+#'
 #' projects.list wrapps groups.list method by setting group_class attribute to "project".
-#' 
+#'
 #' @usage arv$projects.list(filters = NULL,
 #'     where = NULL, order = NULL, distinct = NULL,
 #'     limit = "100", offset = "0", count = "exact",
 #'     include_trash = NULL, uuid = NULL, recursive = NULL)
-#' @param filters 
-#' @param where 
-#' @param order 
-#' @param distinct 
-#' @param limit 
-#' @param offset 
-#' @param count 
+#' @param filters
+#' @param where
+#' @param order
+#' @param distinct
+#' @param limit
+#' @param offset
+#' @param count
 #' @param include_trash Include items whose is_trashed attribute is true.
-#' @param uuid 
+#' @param uuid
 #' @param recursive Include contents from child groups recursively.
 #' @return Group object.
 #' @name projects.list
@@ -2237,19 +2237,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2257,23 +2257,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(user) > 0)
-                               body <- jsonlite::toJSON(list(user = user), 
+                               body <- jsonlite::toJSON(list(user = user),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2281,23 +2281,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(user) > 0)
-                               body <- jsonlite::toJSON(list(user = user), 
+                               body <- jsonlite::toJSON(list(user = user),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2305,19 +2305,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2325,19 +2325,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users/current")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2345,19 +2345,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users/system")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2365,19 +2365,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users/${uuid}/activate")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2386,21 +2386,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users/setup")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(user = user, openid_prefix = openid_prefix,
                                                          repo_name = repo_name, vm_uuid = vm_uuid,
                                                          send_notification_email = send_notification_email)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2408,19 +2408,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users/${uuid}/unsetup")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2428,19 +2428,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users/${uuid}/update_uuid")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(new_uuid = new_uuid)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2450,21 +2450,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("users")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2472,19 +2472,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2493,23 +2493,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_client_authorizations")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(apiclientauthorization) > 0)
-                               body <- jsonlite::toJSON(list(apiclientauthorization = apiclientauthorization), 
+                               body <- jsonlite::toJSON(list(apiclientauthorization = apiclientauthorization),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2517,23 +2517,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(apiclientauthorization) > 0)
-                               body <- jsonlite::toJSON(list(apiclientauthorization = apiclientauthorization), 
+                               body <- jsonlite::toJSON(list(apiclientauthorization = apiclientauthorization),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2541,19 +2541,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_client_authorizations/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2561,20 +2561,20 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_client_authorizations/create_system_auth")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(api_client_id = api_client_id,
                                                          scopes = scopes)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2582,19 +2582,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_client_authorizations/current")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2605,21 +2605,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_client_authorizations")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2627,19 +2627,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("containers/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2647,23 +2647,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("containers")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(container) > 0)
-                               body <- jsonlite::toJSON(list(container = container), 
+                               body <- jsonlite::toJSON(list(container = container),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2671,23 +2671,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("containers/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(container) > 0)
-                               body <- jsonlite::toJSON(list(container = container), 
+                               body <- jsonlite::toJSON(list(container = container),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2695,19 +2695,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("containers/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2715,19 +2715,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("containers/${uuid}/auth")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2735,19 +2735,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("containers/${uuid}/lock")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2755,19 +2755,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("containers/${uuid}/unlock")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2775,19 +2775,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("containers/${uuid}/secret_mounts")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2795,19 +2795,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("containers/current")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2818,21 +2818,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("containers")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2840,19 +2840,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_clients/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2860,23 +2860,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_clients")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(apiclient) > 0)
-                               body <- jsonlite::toJSON(list(apiclient = apiclient), 
+                               body <- jsonlite::toJSON(list(apiclient = apiclient),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2884,23 +2884,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_clients/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(apiclient) > 0)
-                               body <- jsonlite::toJSON(list(apiclient = apiclient), 
+                               body <- jsonlite::toJSON(list(apiclient = apiclient),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2908,19 +2908,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_clients/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2931,21 +2931,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("api_clients")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2953,19 +2953,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("authorized_keys/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2974,23 +2974,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("authorized_keys")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(authorizedkey) > 0)
-                               body <- jsonlite::toJSON(list(authorizedkey = authorizedkey), 
+                               body <- jsonlite::toJSON(list(authorizedkey = authorizedkey),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -2998,23 +2998,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("authorized_keys/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(authorizedkey) > 0)
-                               body <- jsonlite::toJSON(list(authorizedkey = authorizedkey), 
+                               body <- jsonlite::toJSON(list(authorizedkey = authorizedkey),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3022,19 +3022,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("authorized_keys/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3045,21 +3045,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("authorized_keys")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3067,19 +3067,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("container_requests/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3088,23 +3088,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("container_requests")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(containerrequest) > 0)
-                               body <- jsonlite::toJSON(list(containerrequest = containerrequest), 
+                               body <- jsonlite::toJSON(list(containerrequest = containerrequest),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3112,23 +3112,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("container_requests/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(containerrequest) > 0)
-                               body <- jsonlite::toJSON(list(containerrequest = containerrequest), 
+                               body <- jsonlite::toJSON(list(containerrequest = containerrequest),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3136,19 +3136,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("container_requests/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3159,21 +3159,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("container_requests")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3181,19 +3181,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("collections/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3201,23 +3201,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("collections")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(collection) > 0)
-                               body <- jsonlite::toJSON(list(collection = collection), 
+                               body <- jsonlite::toJSON(list(collection = collection),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3225,23 +3225,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("collections/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(collection) > 0)
-                               body <- jsonlite::toJSON(list(collection = collection), 
+                               body <- jsonlite::toJSON(list(collection = collection),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3249,19 +3249,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("collections/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3269,19 +3269,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("collections/${uuid}/provenance")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3289,19 +3289,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("collections/${uuid}/used_by")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3309,19 +3309,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("collections/${uuid}/trash")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3329,19 +3329,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("collections/${uuid}/untrash")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3352,22 +3352,22 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("collections")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count,
                                                          include_trash = include_trash)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3375,19 +3375,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("humans/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3395,23 +3395,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("humans")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(human) > 0)
-                               body <- jsonlite::toJSON(list(human = human), 
+                               body <- jsonlite::toJSON(list(human = human),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3419,23 +3419,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("humans/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(human) > 0)
-                               body <- jsonlite::toJSON(list(human = human), 
+                               body <- jsonlite::toJSON(list(human = human),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3443,19 +3443,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("humans/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3465,21 +3465,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("humans")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3487,19 +3487,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("job_tasks/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3507,23 +3507,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("job_tasks")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(jobtask) > 0)
-                               body <- jsonlite::toJSON(list(jobtask = jobtask), 
+                               body <- jsonlite::toJSON(list(jobtask = jobtask),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3531,23 +3531,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("job_tasks/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(jobtask) > 0)
-                               body <- jsonlite::toJSON(list(jobtask = jobtask), 
+                               body <- jsonlite::toJSON(list(jobtask = jobtask),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3555,19 +3555,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("job_tasks/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3578,21 +3578,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("job_tasks")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3600,19 +3600,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("links/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3620,23 +3620,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("links")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(link) > 0)
-                               body <- jsonlite::toJSON(list(link = link), 
+                               body <- jsonlite::toJSON(list(link = link),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3644,23 +3644,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("links/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(link) > 0)
-                               body <- jsonlite::toJSON(list(link = link), 
+                               body <- jsonlite::toJSON(list(link = link),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3668,19 +3668,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("links/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3690,21 +3690,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("links")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3712,19 +3712,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("permissions/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3732,19 +3732,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("jobs/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3754,26 +3754,26 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("jobs")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name,
                                                          find_or_create = find_or_create, filters = filters,
                                                          minimum_script_version = minimum_script_version,
                                                          exclude_script_versions = exclude_script_versions)
-                       
+
                        if(length(job) > 0)
-                               body <- jsonlite::toJSON(list(job = job), 
+                               body <- jsonlite::toJSON(list(job = job),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3781,23 +3781,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("jobs/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(job) > 0)
-                               body <- jsonlite::toJSON(list(job = job), 
+                               body <- jsonlite::toJSON(list(job = job),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3805,19 +3805,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("jobs/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3827,21 +3827,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("jobs/queue")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3849,19 +3849,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("jobs/queue_size")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3869,19 +3869,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("jobs/${uuid}/cancel")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3889,19 +3889,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("jobs/${uuid}/lock")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3911,21 +3911,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("jobs")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3933,19 +3933,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_disks/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3953,23 +3953,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_disks")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(keepdisk) > 0)
-                               body <- jsonlite::toJSON(list(keepdisk = keepdisk), 
+                               body <- jsonlite::toJSON(list(keepdisk = keepdisk),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -3977,23 +3977,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_disks/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(keepdisk) > 0)
-                               body <- jsonlite::toJSON(list(keepdisk = keepdisk), 
+                               body <- jsonlite::toJSON(list(keepdisk = keepdisk),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4001,19 +4001,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_disks/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4023,22 +4023,22 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_disks/ping")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(uuid = uuid, ping_secret = ping_secret,
                                                          node_uuid = node_uuid, filesystem_uuid = filesystem_uuid,
                                                          service_host = service_host, service_port = service_port,
                                                          service_ssl_flag = service_ssl_flag)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4049,21 +4049,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_disks")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4071,19 +4071,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_services/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4092,23 +4092,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_services")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(keepservice) > 0)
-                               body <- jsonlite::toJSON(list(keepservice = keepservice), 
+                               body <- jsonlite::toJSON(list(keepservice = keepservice),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4116,23 +4116,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_services/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(keepservice) > 0)
-                               body <- jsonlite::toJSON(list(keepservice = keepservice), 
+                               body <- jsonlite::toJSON(list(keepservice = keepservice),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4140,19 +4140,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_services/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4160,19 +4160,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_services/accessible")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4183,21 +4183,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("keep_services")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4205,19 +4205,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4226,23 +4226,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_templates")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(pipelinetemplate) > 0)
-                               body <- jsonlite::toJSON(list(pipelinetemplate = pipelinetemplate), 
+                               body <- jsonlite::toJSON(list(pipelinetemplate = pipelinetemplate),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4250,23 +4250,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(pipelinetemplate) > 0)
-                               body <- jsonlite::toJSON(list(pipelinetemplate = pipelinetemplate), 
+                               body <- jsonlite::toJSON(list(pipelinetemplate = pipelinetemplate),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4274,19 +4274,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_templates/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4297,21 +4297,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_templates")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4319,19 +4319,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4340,23 +4340,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_instances")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(pipelineinstance) > 0)
-                               body <- jsonlite::toJSON(list(pipelineinstance = pipelineinstance), 
+                               body <- jsonlite::toJSON(list(pipelineinstance = pipelineinstance),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4364,23 +4364,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(pipelineinstance) > 0)
-                               body <- jsonlite::toJSON(list(pipelineinstance = pipelineinstance), 
+                               body <- jsonlite::toJSON(list(pipelineinstance = pipelineinstance),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4388,19 +4388,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_instances/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4408,19 +4408,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_instances/${uuid}/cancel")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4431,21 +4431,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("pipeline_instances")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4453,19 +4453,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("nodes/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4474,24 +4474,24 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("nodes")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name,
                                                          assign_slot = assign_slot)
-                       
+
                        if(length(node) > 0)
-                               body <- jsonlite::toJSON(list(node = node), 
+                               body <- jsonlite::toJSON(list(node = node),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4499,23 +4499,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("nodes/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(assign_slot = assign_slot)
-                       
+
                        if(length(node) > 0)
-                               body <- jsonlite::toJSON(list(node = node), 
+                               body <- jsonlite::toJSON(list(node = node),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4523,19 +4523,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("nodes/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4543,19 +4543,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("nodes/${uuid}/ping")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ping_secret = ping_secret)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4565,21 +4565,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("nodes")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4587,19 +4587,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("repositories/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4607,23 +4607,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("repositories")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(repository) > 0)
-                               body <- jsonlite::toJSON(list(repository = repository), 
+                               body <- jsonlite::toJSON(list(repository = repository),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4631,23 +4631,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("repositories/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(repository) > 0)
-                               body <- jsonlite::toJSON(list(repository = repository), 
+                               body <- jsonlite::toJSON(list(repository = repository),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4655,19 +4655,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("repositories/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4675,19 +4675,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("repositories/get_all_permissions")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4698,21 +4698,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("repositories")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4720,19 +4720,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("specimens/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4740,23 +4740,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("specimens")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(specimen) > 0)
-                               body <- jsonlite::toJSON(list(specimen = specimen), 
+                               body <- jsonlite::toJSON(list(specimen = specimen),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4764,23 +4764,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("specimens/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(specimen) > 0)
-                               body <- jsonlite::toJSON(list(specimen = specimen), 
+                               body <- jsonlite::toJSON(list(specimen = specimen),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4788,19 +4788,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("specimens/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4811,21 +4811,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("specimens")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4833,19 +4833,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("logs/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4853,23 +4853,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("logs")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(log) > 0)
-                               body <- jsonlite::toJSON(list(log = log), 
+                               body <- jsonlite::toJSON(list(log = log),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4877,23 +4877,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("logs/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(log) > 0)
-                               body <- jsonlite::toJSON(list(log = log), 
+                               body <- jsonlite::toJSON(list(log = log),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4901,19 +4901,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("logs/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4923,21 +4923,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("logs")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4945,19 +4945,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("traits/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4965,23 +4965,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("traits")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(trait) > 0)
-                               body <- jsonlite::toJSON(list(trait = trait), 
+                               body <- jsonlite::toJSON(list(trait = trait),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -4989,23 +4989,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("traits/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(trait) > 0)
-                               body <- jsonlite::toJSON(list(trait = trait), 
+                               body <- jsonlite::toJSON(list(trait = trait),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5013,19 +5013,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("traits/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5035,21 +5035,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("traits")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5057,19 +5057,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("virtual_machines/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5078,23 +5078,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("virtual_machines")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(virtualmachine) > 0)
-                               body <- jsonlite::toJSON(list(virtualmachine = virtualmachine), 
+                               body <- jsonlite::toJSON(list(virtualmachine = virtualmachine),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5102,23 +5102,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("virtual_machines/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(virtualmachine) > 0)
-                               body <- jsonlite::toJSON(list(virtualmachine = virtualmachine), 
+                               body <- jsonlite::toJSON(list(virtualmachine = virtualmachine),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5126,19 +5126,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("virtual_machines/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5146,19 +5146,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("virtual_machines/${uuid}/logins")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5166,19 +5166,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("virtual_machines/get_all_logins")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5189,21 +5189,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("virtual_machines")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5211,19 +5211,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("workflows/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5231,23 +5231,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("workflows")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(workflow) > 0)
-                               body <- jsonlite::toJSON(list(workflow = workflow), 
+                               body <- jsonlite::toJSON(list(workflow = workflow),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5255,23 +5255,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("workflows/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(workflow) > 0)
-                               body <- jsonlite::toJSON(list(workflow = workflow), 
+                               body <- jsonlite::toJSON(list(workflow = workflow),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5279,19 +5279,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("workflows/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5302,21 +5302,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("workflows")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5324,19 +5324,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("groups/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5344,23 +5344,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("groups")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(group) > 0)
-                               body <- jsonlite::toJSON(list(group = group), 
+                               body <- jsonlite::toJSON(list(group = group),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5368,23 +5368,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("groups/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(group) > 0)
-                               body <- jsonlite::toJSON(list(group = group), 
+                               body <- jsonlite::toJSON(list(group = group),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5392,19 +5392,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("groups/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5415,22 +5415,22 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("groups/contents")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, distinct = distinct, limit = limit,
                                                          offset = offset, count = count, include_trash = include_trash,
                                                          uuid = uuid, recursive = recursive)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5438,19 +5438,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("groups/${uuid}/trash")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5458,19 +5458,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("groups/${uuid}/untrash")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5481,22 +5481,22 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("groups")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count,
                                                          include_trash = include_trash)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5504,19 +5504,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("user_agreements/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5525,23 +5525,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("user_agreements")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(ensure_unique_name = ensure_unique_name)
-                       
+
                        if(length(useragreement) > 0)
-                               body <- jsonlite::toJSON(list(useragreement = useragreement), 
+                               body <- jsonlite::toJSON(list(useragreement = useragreement),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5549,23 +5549,23 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("user_agreements/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        if(length(useragreement) > 0)
-                               body <- jsonlite::toJSON(list(useragreement = useragreement), 
+                               body <- jsonlite::toJSON(list(useragreement = useragreement),
                                                         auto_unbox = TRUE)
                        else
                                body <- NULL
-                       
+
                        response <- private$REST$http$exec("PUT", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5573,19 +5573,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("user_agreements/${uuid}")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("DELETE", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5593,19 +5593,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("user_agreements/signatures")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5613,19 +5613,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("user_agreements/sign")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("POST", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5636,21 +5636,21 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("user_agreements")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- list(filters = filters, where = where,
                                                          order = order, select = select, distinct = distinct,
                                                          limit = limit, offset = offset, count = count)
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },
 
@@ -5658,19 +5658,19 @@ Arvados <- R6::R6Class(
                {
                        endPoint <- stringr::str_interp("user_agreements/new")
                        url <- paste0(private$host, endPoint)
-                       headers <- list(Authorization = paste("OAuth2", private$token), 
+                       headers <- list(Authorization = paste("OAuth2", private$token),
                                        "Content-Type" = "application/json")
                        queryArgs <- NULL
-                       
+
                        body <- NULL
-                       
+
                        response <- private$REST$http$exec("GET", url, headers, body,
                                                           queryArgs, private$numRetries)
                        resource <- private$REST$httpParser$parseJSONResponse(response)
-                       
+
                        if(!is.null(resource$errors))
                                stop(resource$errors)
-                       
+
                        resource
                },