echo >&2 " -t, --test Test installation running a CWL workflow"
echo >&2 " -r, --roles List of Arvados roles to apply to the host, comma separated"
echo >&2 " Possible values are:"
- echo >&2 " api"
echo >&2 " balancer"
echo >&2 " controller"
echo >&2 " dispatcher"
for i in ${2//,/ }
do
# Verify the role exists
- if [[ ! "database,api,balancer,controller,keepstore,websocket,keepweb,workbench2,webshell,keepbalance,keepproxy,shell,workbench,dispatcher,monitoring" == *"$i"* ]]; then
+ if [[ ! "database,balancer,controller,keepstore,websocket,keepweb,workbench2,webshell,keepbalance,keepproxy,shell,workbench,dispatcher,monitoring" == *"$i"* ]]; then
echo "The role '${i}' is not a valid role"
usage
exit 1
s#__INITIAL_USER_EMAIL__#${INITIAL_USER_EMAIL}#g;
s#__INITIAL_USER_PASSWORD__#${INITIAL_USER_PASSWORD}#g;
s#__INITIAL_USER__#${INITIAL_USER}#g;
- s#__LE_AWS_REGION__#${LE_AWS_REGION}#g;
- s#__LE_AWS_SECRET_ACCESS_KEY__#${LE_AWS_SECRET_ACCESS_KEY}#g;
- s#__LE_AWS_ACCESS_KEY_ID__#${LE_AWS_ACCESS_KEY_ID}#g;
+ s#__LE_AWS_REGION__#${LE_AWS_REGION:-}#g;
+ s#__LE_AWS_SECRET_ACCESS_KEY__#${LE_AWS_SECRET_ACCESS_KEY:-}#g;
+ s#__LE_AWS_ACCESS_KEY_ID__#${LE_AWS_ACCESS_KEY_ID:-}#g;
+ s#__DATABASE_NAME__#${DATABASE_NAME}#g;
+ s#__DATABASE_USER__#${DATABASE_USER}#g;
s#__DATABASE_PASSWORD__#${DATABASE_PASSWORD}#g;
+ s#__DATABASE_INT_IP__#${DATABASE_INT_IP:-}#g;
+ s#__DATABASE_EXTERNAL_SERVICE_HOST_OR_IP__#${DATABASE_EXTERNAL_SERVICE_HOST_OR_IP:-}#g;
+ s#__DATABASE_POSTGRESQL_VERSION__#${DATABASE_POSTGRESQL_VERSION}#g;
s#__KEEPWEB_EXT_SSL_PORT__#${KEEPWEB_EXT_SSL_PORT}#g;
s#__KEEP_EXT_SSL_PORT__#${KEEP_EXT_SSL_PORT}#g;
s#__MANAGEMENT_TOKEN__#${MANAGEMENT_TOKEN}#g;
s#__SHELL_INT_IP__#${SHELL_INT_IP}#g;
s#__WORKBENCH1_INT_IP__#${WORKBENCH1_INT_IP}#g;
s#__WORKBENCH2_INT_IP__#${WORKBENCH2_INT_IP}#g;
- s#__DATABASE_INT_IP__#${DATABASE_INT_IP}#g;
s#__WORKBENCH_SECRET_KEY__#${WORKBENCH_SECRET_KEY}#g;
s#__SSL_KEY_ENCRYPTED__#${SSL_KEY_ENCRYPTED}#g;
- s#__SSL_KEY_AWS_REGION__#${SSL_KEY_AWS_REGION}#g;
+ s#__SSL_KEY_AWS_REGION__#${SSL_KEY_AWS_REGION:-}#g;
s#__SSL_KEY_AWS_SECRET_NAME__#${SSL_KEY_AWS_SECRET_NAME}#g;
- s#__CONTROLLER_NGINX_WORKERS__#${CONTROLLER_NGINX_WORKERS:-}#g;
- s#__CONTROLLER_MAX_CONCURRENT_REQUESTS__#${CONTROLLER_MAX_CONCURRENT_REQUESTS:-}#g;
+ s#__CONTROLLER_MAX_WORKERS__#${CONTROLLER_MAX_WORKERS:-}#g;
+ s#__CONTROLLER_MAX_QUEUED_REQUESTS__#${CONTROLLER_MAX_QUEUED_REQUESTS:-128}#g;
s#__MONITORING_USERNAME__#${MONITORING_USERNAME}#g;
s#__MONITORING_EMAIL__#${MONITORING_EMAIL}#g;
s#__MONITORING_PASSWORD__#${MONITORING_PASSWORD}#g;
s#__DISPATCHER_SSH_PRIVKEY__#${DISPATCHER_SSH_PRIVKEY//$'\n'/\\n}#g;
s#__ENABLE_BALANCER__#${ENABLE_BALANCER}#g;
s#__DISABLED_CONTROLLER__#${DISABLED_CONTROLLER}#g;
- s#__BALANCER_NODENAME__#${ROLE2NODES['balancer']}#g;
- s#__PROMETHEUS_NODENAME__#${ROLE2NODES['monitoring']}#g;
- s#__CONTROLLER_NODES__#${ROLE2NODES['controller']}#g;
+ s#__BALANCER_NODENAME__#${ROLE2NODES['balancer']:-}#g;
+ s#__PROMETHEUS_NODENAME__#${ROLE2NODES['monitoring']:-}#g;
+ s#__PROMETHEUS_DATA_RETENTION_TIME__#${PROMETHEUS_DATA_RETENTION_TIME:-15d}#g;
+ s#__CONTROLLER_NODES__#${ROLE2NODES['controller']:-}#g;
s#__NODELIST__#${NODELIST}#g;
s#__DISPATCHER_INT_IP__#${DISPATCHER_INT_IP}#g;
s#__KEEPBALANCE_INT_IP__#${KEEPBALANCE_INT_IP}#g;
- s#__COMPUTE_AMI__#${COMPUTE_AMI}#g;
- s#__COMPUTE_SG__#${COMPUTE_SG}#g;
- s#__COMPUTE_SUBNET__#${COMPUTE_SUBNET}#g;
- s#__COMPUTE_AWS_REGION__#${COMPUTE_AWS_REGION}#g;
- s#__COMPUTE_USER__#${COMPUTE_USER}#g;
- s#__KEEP_AWS_REGION__#${KEEP_AWS_REGION}#g" \
+ s#__COMPUTE_AMI__#${COMPUTE_AMI:-}#g;
+ s#__COMPUTE_SG__#${COMPUTE_SG:-}#g;
+ s#__COMPUTE_SUBNET__#${COMPUTE_SUBNET:-}#g;
+ s#__COMPUTE_AWS_REGION__#${COMPUTE_AWS_REGION:-}#g;
+ s#__COMPUTE_USER__#${COMPUTE_USER:-}#g;
+ s#__KEEP_AWS_S3_BUCKET__#${KEEP_AWS_S3_BUCKET:-}#g;
+ s#__KEEP_AWS_IAM_ROLE__#${KEEP_AWS_IAM_ROLE:-}#g;
+ s#__KEEP_AWS_REGION__#${KEEP_AWS_REGION:-}#g" \
"${SRCFILE}" > "${DSTFILE}"
}
arguments ${@}
declare -A NODES
-declare -A ROLES
+declare -A ROLE2NODES
declare NODELIST
source common.sh
test -d arvados || git clone --quiet https://git.arvados.org/arvados-formula.git ${F_DIR}/arvados
# If we want to try a specific branch of the formula
-if [ "x${BRANCH:-}" != "x" ]; then
+if [[ ! -z "${BRANCH:-}" && "x${BRANCH}" != "xmain" ]]; then
( cd ${F_DIR}/arvados && git checkout --quiet -t origin/"${BRANCH}" -b "${BRANCH}" )
elif [ "x${ARVADOS_TAG:-}" != "x" ]; then
( cd ${F_DIR}/arvados && git checkout --quiet tags/"${ARVADOS_TAG}" -b "${ARVADOS_TAG}" )
# Replace helper state files that differ from the formula's examples
if [ -d "${SOURCE_STATES_DIR}" ]; then
mkdir -p "${F_DIR}"/extra/extra
- rm -f "${F_DIR}"/extra/extra/*
+ rm -rf "${F_DIR}"/extra/extra/*
for f in $(ls "${SOURCE_STATES_DIR}"/*); do
apply_var_substitutions "${f}" "${F_DIR}/extra/extra"/$(basename "${f}")
# If we want specific roles for a node, just add the desired states
# and its dependencies
-if [ -z "${ROLES}" ]; then
+if [ -z "${ROLES:-}" ]; then
# States
echo " - nginx.passenger" >> ${STATES_TOP}
if [ "${SSL_MODE}" = "lets-encrypt" ]; then
grep -q ${CERT_NAME} ${P_DIR}/extra_custom_certs.sls || echo " - ${CERT_NAME}" >> ${P_DIR}/extra_custom_certs.sls
# As the pillar differs whether we use LE or custom certs, we need to do a final edition on them
- sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_file_copy_arvados-${CERT_NAME}.pem/g;
+ sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_${CERT_NAME}_cert_file_copy/g;
s#__CERT_PEM__#/etc/nginx/ssl/arvados-${CERT_NAME}.pem#g;
s#__CERT_KEY__#/etc/nginx/ssl/arvados-${CERT_NAME}.key#g" \
${P_DIR}/nginx_${c}_configuration.sls
# Prometheus node exporter pillar
grep -q "prometheus_node_exporter" ${PILLARS_TOP} || echo " - prometheus_node_exporter" >> ${PILLARS_TOP}
- for R in ${ROLES}; do
+ for R in ${ROLES:-}; do
case "${R}" in
"database")
# States
# "ArvadosPromDataSource" is the hardcoded UID for Prometheus' datasource
# in Grafana.
for f in $(ls "${GRAFANA_DASHBOARDS_DIR}"/*.json); do
- sed 's#${DS_PROMETHEUS}#ArvadosPromDataSource#g' \
+ sed "s#__TLS_EXPIRATION_YELLOW__#${TLS_EXPIRATION_YELLOW}#g;
+ s#__TLS_EXPIRATION_GREEN__#${TLS_EXPIRATION_GREEN}#g;
+ s#\${DS_PROMETHEUS}#ArvadosPromDataSource#g" \
"${f}" > "${GRAFANA_DASHBOARDS_DEST_DIR}"/$(basename "${f}")
done
elif [ "${SSL_MODE}" = "bring-your-own" ]; then
grep -q "ssl_key_encrypted" ${PILLARS_TOP} || echo " - ssl_key_encrypted" >> ${PILLARS_TOP}
for SVC in grafana prometheus; do
- sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_file_copy_arvados-${SVC}.pem/g;
+ sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_${SVC}_cert_file_copy/g;
s#__CERT_PEM__#/etc/nginx/ssl/arvados-${SVC}.pem#g;
s#__CERT_KEY__#/etc/nginx/ssl/arvados-${SVC}.key#g" \
${P_DIR}/nginx_${SVC}_configuration.sls
done
fi
;;
- "api")
- # States
- grep -q " - logrotate" ${STATES_TOP} || echo " - logrotate" >> ${STATES_TOP}
- if grep -q " - nginx.*$" ${STATES_TOP}; then
- sed -i s/"^ - nginx.*$"/" - nginx.passenger"/g ${STATES_TOP}
- else
- echo " - nginx.passenger" >> ${STATES_TOP}
- fi
- echo " - extra.passenger_rvm" >> ${STATES_TOP}
- ### If we don't install and run LE before arvados-api-server, it fails and breaks everything
- ### after it. So we add this here as we are, after all, sharing the host for api and controller
- if [ "${ENABLE_BALANCER}" == "no" ]; then
- if [ "${SSL_MODE}" = "lets-encrypt" ]; then
- if [ "${USE_LETSENCRYPT_ROUTE53}" = "yes" ]; then
- grep -q "aws_credentials" ${STATES_TOP} || echo " - aws_credentials" >> ${STATES_TOP}
- fi
- grep -q "letsencrypt" ${STATES_TOP} || echo " - letsencrypt" >> ${STATES_TOP}
- else
- # Use custom certs
- if [ "${SSL_MODE}" = "bring-your-own" ]; then
- copy_custom_cert ${CUSTOM_CERTS_DIR} controller
- fi
- grep -q controller ${P_DIR}/extra_custom_certs.sls || echo " - controller" >> ${P_DIR}/extra_custom_certs.sls
- fi
- fi
- grep -q "arvados.${R}" ${STATES_TOP} || echo " - arvados.${R}" >> ${STATES_TOP}
- # Pillars
- grep -q "logrotate_api" ${PILLARS_TOP} || echo " - logrotate_api" >> ${PILLARS_TOP}
- grep -q "aws_credentials" ${PILLARS_TOP} || echo " - aws_credentials" >> ${PILLARS_TOP}
- grep -q "postgresql" ${PILLARS_TOP} || echo " - postgresql" >> ${PILLARS_TOP}
- grep -q "nginx_passenger" ${PILLARS_TOP} || echo " - nginx_passenger" >> ${PILLARS_TOP}
- grep -q "nginx_${R}_configuration" ${PILLARS_TOP} || echo " - nginx_${R}_configuration" >> ${PILLARS_TOP}
-
- # We need to tweak the Nginx's pillar depending whether we want plain nginx or nginx+passenger
- NGINX_INSTALL_SOURCE="install_from_phusionpassenger"
- sed -i "s/__NGINX_INSTALL_SOURCE__/${NGINX_INSTALL_SOURCE}/g" ${P_DIR}/nginx_passenger.sls
- ;;
"balancer")
### States ###
grep -q "\- nginx$" ${STATES_TOP} || echo " - nginx" >> ${STATES_TOP}
fi
elif [ "${SSL_MODE}" = "bring-your-own" ]; then
grep -q "ssl_key_encrypted" ${PILLARS_TOP} || echo " - ssl_key_encrypted" >> ${PILLARS_TOP}
- sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_file_copy_arvados-${R}.pem/g;
+ sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_${R}_cert_file_copy/g;
s#__CERT_PEM__#/etc/nginx/ssl/arvados-${R}.pem#g;
s#__CERT_KEY__#/etc/nginx/ssl/arvados-${R}.key#g" \
${P_DIR}/nginx_${R}_configuration.sls
;;
"controller")
### States ###
- grep -q "\- nginx$" ${STATES_TOP} || echo " - nginx" >> ${STATES_TOP}
- grep -q "arvados.${R}" ${STATES_TOP} || echo " - arvados.${R}" >> ${STATES_TOP}
+ grep -q " - logrotate" ${STATES_TOP} || echo " - logrotate" >> ${STATES_TOP}
+ if grep -q " - nginx.*$" ${STATES_TOP}; then
+ sed -i s/"^ - nginx.*$"/" - nginx.passenger"/g ${STATES_TOP}
+ else
+ echo " - nginx.passenger" >> ${STATES_TOP}
+ fi
+ echo " - extra.passenger_rvm" >> ${STATES_TOP}
+ grep -q "^ - postgres\\.client$" ${STATES_TOP} || echo " - postgres.client" >> ${STATES_TOP}
+ ### If we don't install and run LE before arvados-api-server, it fails and breaks everything
+ ### after it. So we add this here as we are, after all, sharing the host for api and controller
if [ "${ENABLE_BALANCER}" == "no" ]; then
if [ "${SSL_MODE}" = "lets-encrypt" ]; then
if [ "x${USE_LETSENCRYPT_ROUTE53:-}" = "xyes" ]; then
grep -q "letsencrypt" ${STATES_TOP} || echo " - letsencrypt" >> ${STATES_TOP}
elif [ "${SSL_MODE}" = "bring-your-own" ]; then
copy_custom_cert ${CUSTOM_CERTS_DIR} ${R}
+ grep -q controller ${P_DIR}/extra_custom_certs.sls || echo " - controller" >> ${P_DIR}/extra_custom_certs.sls
fi
fi
+ grep -q "arvados.api" ${STATES_TOP} || echo " - arvados.api" >> ${STATES_TOP}
+ grep -q "arvados.controller" ${STATES_TOP} || echo " - arvados.controller" >> ${STATES_TOP}
### Pillars ###
+ grep -q "logrotate_api" ${PILLARS_TOP} || echo " - logrotate_api" >> ${PILLARS_TOP}
+ grep -q "aws_credentials" ${PILLARS_TOP} || echo " - aws_credentials" >> ${PILLARS_TOP}
+ grep -q "postgresql" ${PILLARS_TOP} || echo " - postgresql" >> ${PILLARS_TOP}
grep -q "nginx_passenger" ${PILLARS_TOP} || echo " - nginx_passenger" >> ${PILLARS_TOP}
- grep -q "nginx_${R}_configuration" ${PILLARS_TOP} || echo " - nginx_${R}_configuration" >> ${PILLARS_TOP}
+ grep -q "nginx_api_configuration" ${PILLARS_TOP} || echo " - nginx_api_configuration" >> ${PILLARS_TOP}
+ grep -q "nginx_controller_configuration" ${PILLARS_TOP} || echo " - nginx_controller_configuration" >> ${PILLARS_TOP}
if [ "${ENABLE_BALANCER}" == "no" ]; then
if [ "${SSL_MODE}" = "lets-encrypt" ]; then
${P_DIR}/nginx_${R}_configuration.sls
else
grep -q "ssl_key_encrypted" ${PILLARS_TOP} || echo " - ssl_key_encrypted" >> ${PILLARS_TOP}
- sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_file_copy_arvados-${R}.pem/g;
+ sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_${R}_cert_file_copy/g;
s#__CERT_PEM__#/etc/nginx/ssl/arvados-${R}.pem#g;
s#__CERT_KEY__#/etc/nginx/ssl/arvados-${R}.key#g" \
${P_DIR}/nginx_${R}_configuration.sls
fi
fi
# We need to tweak the Nginx's pillar depending whether we want plain nginx or nginx+passenger
+ NGINX_INSTALL_SOURCE="install_from_phusionpassenger"
sed -i "s/__NGINX_INSTALL_SOURCE__/${NGINX_INSTALL_SOURCE}/g" ${P_DIR}/nginx_passenger.sls
;;
"websocket" | "workbench" | "workbench2" | "webshell" | "keepweb" | "keepproxy")
# Special case for keepweb
if [ ${R} = "keepweb" ]; then
for kwsub in download collections; do
- sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_file_copy_arvados-${kwsub}.pem/g;
+ sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_${kwsub}_cert_file_copy/g;
s#__CERT_PEM__#/etc/nginx/ssl/arvados-${kwsub}.pem#g;
s#__CERT_KEY__#/etc/nginx/ssl/arvados-${kwsub}.key#g" \
${P_DIR}/nginx_${kwsub}_configuration.sls
grep -q ${kwsub} ${P_DIR}/extra_custom_certs.sls || echo " - ${kwsub}" >> ${P_DIR}/extra_custom_certs.sls
done
else
- sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_file_copy_arvados-${R}.pem/g;
+ sed -i "s/__CERT_REQUIRES__/file: extra_custom_certs_${R}_cert_file_copy/g;
s#__CERT_PEM__#/etc/nginx/ssl/arvados-${R}.pem#g;
s#__CERT_KEY__#/etc/nginx/ssl/arvados-${R}.key#g" \
${P_DIR}/nginx_${R}_configuration.sls
projects / arvados.git / blobdiff