-all: api-image doc-image workbench-image keep-image sso-image
+# This is the 'shell hack'. Call make with DUMP=1 to see the effect.
+ifdef DUMP
+OLD_SHELL := $(SHELL)
+SHELL = $(warning [$@])$(OLD_SHELL) -x
+endif
+
+all: skydns-image skydock-image api-image compute-image doc-image workbench-image keep-image sso-image shell-image
+
+IMAGE_FILES := $(shell ls *-image 2>/dev/null |grep -v debian-arvados-image)
+GENERATED_FILES := $(shell ls */generated/* 2>/dev/null)
+GENERATED_DIRS := $(shell ls */generated 2>/dev/null)
# `make clean' removes the files generated in the build directory
# but does not remove any docker images generated in previous builds
clean:
- -rm -rf build
- -rm *-image */generated/*
- -@rmdir */generated
-
-# `make realclean' will also remove the docker images and force
-# subsequent makes to build the entire chain from the ground up
+ @echo "make clean"
+ -@rm -rf build
+ +@[ "$(IMAGE_FILES)$(GENERATED_FILES)" = "" ] || rm $(IMAGE_FILES) $(GENERATED_FILES) 2>/dev/null
+ +@[ "$(GENERATED_DIRS)" = "" ] || rmdir */generated 2>/dev/null
+
+DEBIAN_IMAGE := $(shell $(DOCKER) images -q arvados/debian |head -n1)
+
+REALCLEAN_CONTAINERS := $(shell $(DOCKER) ps -a |grep -e arvados -e api_server -e keep_server -e doc_server -e workbench_server |cut -f 1 -d' ')
+REALCLEAN_IMAGES := $(shell $(DOCKER) images -q arvados/* |grep -v $(DEBIAN_IMAGE) 2>/dev/null)
+DEEPCLEAN_IMAGES := $(shell $(DOCKER) images -q arvados/*)
+SKYDNS_CONTAINERS := $(shell $(DOCKER) ps -a |grep -e crosbymichael/skydns -e crosbymichael/skydock |cut -f 1 -d' ')
+SKYDNS_IMAGES := $(shell $(DOCKER) images -q crosbymichael/skyd*)
+
+# `make realclean' will also remove the Arvados docker images (but not the
+# arvados/debian image) and force subsequent makes to build the entire chain
+# from the ground up
realclean: clean
- -[ -n "`$(DOCKER) ps -q`" ] && $(DOCKER) stop `$(DOCKER) ps -q`
- -$(DOCKER) rm `$(DOCKER) ps -a -q`
- -$(DOCKER) rmi `$(DOCKER) images -q`
+ @echo "make realclean"
+ +@[ "`$(DOCKER) ps -q`" = '' ] || $(DOCKER) stop `$(DOCKER) ps -q`
+ +@[ "$(REALCLEAN_CONTAINERS)" = '' ] || $(DOCKER) rm $(REALCLEAN_CONTAINERS)
+ +@[ "$(REALCLEAN_IMAGES)" = '' ] || $(DOCKER) rmi $(REALCLEAN_IMAGES)
+
+# `make deepclean' will remove all Arvados docker images and the skydns/skydock
+# images and force subsequent makes to build the entire chain from the ground up
+deepclean: clean
+ @echo "make deepclean"
+ -@rm -f debian-arvados-image 2>/dev/null
+ +@[ "`$(DOCKER) ps -q`" = '' ] || $(DOCKER) stop `$(DOCKER) ps -q`
+ +@[ "$(REALCLEAN_CONTAINERS)" = '' ] || $(DOCKER) rm $(REALCLEAN_CONTAINERS)
+ +@[ "$(DEEPCLEAN_IMAGES)" = '' ] || $(DOCKER) rmi $(DEEPCLEAN_IMAGES)
+ +@[ "$(SKYDNS_CONTAINERS)" = '' ] || $(DOCKER) rm $(SKYDNS_CONTAINERS)
+ +@[ "$(SKYDNS_IMAGES)" = '' ] || $(DOCKER) rmi $(SKYDNS_IMAGES)
# ============================================================
# Dependencies for */generated files which are prerequisites
BASE_DEPS = base/Dockerfile $(BASE_GENERATED)
+SLURM_DEPS = slurm/Dockerfile $(SLURM_GENERATED)
+
JOBS_DEPS = jobs/Dockerfile
-API_DEPS = api/Dockerfile $(API_GENERATED)
+JAVA_BWA_SAMTOOLS_DEPS = java-bwa-samtools/Dockerfile
+
+API_DEPS = api/* $(API_GENERATED)
+
+SHELL_DEPS = shell/* $(SHELL_GENERATED)
+
+COMPUTE_DEPS = compute/* $(COMPUTE_GENERATED)
DOC_DEPS = doc/Dockerfile doc/apache2_vhost
WORKBENCH_DEPS = workbench/Dockerfile \
- workbench/passenger.conf \
$(WORKBENCH_GENERATED)
-KEEP_DEPS = keep/Dockerfile
+KEEP_DEPS = keep/Dockerfile $(KEEP_GENERATED)
+
+SSO_DEPS = $(SSO_GENERATED)
-SSO_DEPS = sso/passenger.conf $(SSO_GENERATED)
+BCBIO_NEXTGEN_DEPS = bcbio-nextgen/Dockerfile
BASE_GENERATED = base/generated/arvados.tar.gz
+SLURM_GENERATED = slurm/generated/*
+
+COMPUTE_GENERATED = compute/generated/setup.sh
+
+COMPUTE_GENERATED_IN = compute/setup.sh.in
+
+KEEP_GENERATED_IN := $(shell ls keep/*.in)
+
+KEEP_GENERATED := $(shell ls -1 $(KEEP_GENERATED_IN) | perl -pe 's:^keep:keep/generated:; s:\.in$::')
+
API_GENERATED = \
+ api/generated/arvados-clients.yml \
api/generated/apache2_vhost \
api/generated/config_databases.sh \
api/generated/database.yml \
api/generated/omniauth.rb \
api/generated/application.yml \
+ api/generated/setup.sh \
+ api/generated/setup-gitolite.sh \
+ api/generated/slurm.conf \
api/generated/superuser_token
API_GENERATED_IN = \
+ api/arvados-clients.yml.in \
api/apache2_vhost.in \
api/config_databases.sh.in \
api/database.yml.in \
api/omniauth.rb.in \
api/application.yml.in \
+ api/setup.sh.in \
+ api/setup-gitolite.sh.in \
+ api/slurm.conf.in \
api/superuser_token.in
+SHELL_GENERATED = \
+ shell/generated/setup.sh \
+ shell/generated/superuser_token
+
+SHELL_GENERATED_IN = \
+ shell/setup.sh.in \
+ shell/superuser_token.in
+
+SLURM_GENERATED = \
+ slurm/generated/slurm.conf
+
+SLURM_GENERATED_IN = \
+ slurm/slurm.conf.in
+
WORKBENCH_GENERATED = \
+ workbench/generated/workbench_rails_env \
workbench/generated/apache2_vhost \
workbench/generated/application.yml
WORKBENCH_GENERATED_IN = \
+ workbench/workbench_rails_env.in \
workbench/apache2_vhost.in \
workbench/application.yml.in
cd build/sdk/ruby && gem build arvados.gemspec
touch build/.buildstamp
+$(SLURM_GENERATED): config.yml $(BUILD)
+ $(CONFIG_RB)
+ mkdir -p slurm/generated
+
$(BASE_GENERATED): config.yml $(BUILD)
$(CONFIG_RB)
mkdir -p base/generated
$(API_GENERATED): config.yml $(API_GENERATED_IN)
$(CONFIG_RB)
+$(SHELL_GENERATED): config.yml $(SHELL_GENERATED_IN)
+ $(CONFIG_RB)
+
$(WORKBENCH_GENERATED): config.yml $(WORKBENCH_GENERATED_IN)
$(CONFIG_RB)
+$(COMPUTE_GENERATED): config.yml $(COMPUTE_GENERATED_IN)
+ $(CONFIG_RB)
+
$(WAREHOUSE_GENERATED): config.yml $(WAREHOUSE_GENERATED_IN)
$(CONFIG_RB)
$(SSO_GENERATED): config.yml $(SSO_GENERATED_IN)
$(CONFIG_RB)
+$(KEEP_GENERATED): config.yml $(KEEP_GENERATED_IN)
+ $(CONFIG_RB)
+
# The docker build -q option suppresses verbose build output.
# Necessary to prevent failure on building warehouse; see
# https://github.com/dotcloud/docker/issues/3172
-DOCKER_BUILD = $(DOCKER) build -q
+DOCKER_BUILD = $(DOCKER) build -q --rm=true
# ============================================================
# The main Arvados servers: api, doc, workbench, warehouse
api-image: passenger-image $(BUILD) $(API_DEPS)
+ @echo "Building api-image"
mkdir -p api/generated
tar -czf api/generated/api.tar.gz -C build/services api
+ chmod 755 api/generated/setup.sh
+ chmod 755 api/generated/setup-gitolite.sh
$(DOCKER_BUILD) -t arvados/api api
date >api-image
+shell-image: base-image $(BUILD) $(SHELL_DEPS)
+ @echo "Building shell-image"
+ mkdir -p shell/generated
+ chmod 755 shell/generated/setup.sh
+ $(DOCKER_BUILD) -t arvados/shell shell
+ date >shell-image
+
+compute-image: slurm-image $(BUILD) $(COMPUTE_DEPS)
+ @echo "Building compute-image"
+ chmod 755 compute/generated/setup.sh
+ $(DOCKER_BUILD) -t arvados/compute compute
+ date >compute-image
+
doc-image: base-image $(BUILD) $(DOC_DEPS)
+ @echo "Building doc-image"
mkdir -p doc/generated
tar -czf doc/generated/doc.tar.gz -C build doc
$(DOCKER_BUILD) -t arvados/doc doc
date >doc-image
-keep-image: debian-image $(BUILD) $(KEEP_DEPS)
+keep-image: debian-arvados-image $(BUILD) $(KEEP_DEPS)
+ @echo "Building keep-image"
$(DOCKER_BUILD) -t arvados/keep keep
date >keep-image
$(DOCKER_BUILD) -t arvados/jobs jobs
date >jobs-image
+java-bwa-samtools-image: jobs-image $(BUILD) $(JAVA_BWA_SAMTOOLS_DEPS)
+ $(DOCKER_BUILD) -t arvados/jobs-java-bwa-samtools java-bwa-samtools
+ date >java-bwa-samtools-image
+
+bcbio-nextgen-image: $(BUILD) $(BASE_GENERATED) $(BCBIO_NEXTGEN_DEPS)
+ rm -rf bcbio-nextgen/generated
+ cp -r base/generated bcbio-nextgen
+ $(DOCKER_BUILD) -t arvados/bcbio-nextgen bcbio-nextgen
+ date >bcbio-nextgen-image
+
workbench-image: passenger-image $(BUILD) $(WORKBENCH_DEPS)
+ @echo "Building workbench-image"
mkdir -p workbench/generated
tar -czf workbench/generated/workbench.tar.gz -C build/apps workbench
$(DOCKER_BUILD) -t arvados/workbench workbench
date >warehouse-image
sso-image: passenger-image $(SSO_DEPS)
+ @echo "Building sso-image"
$(DOCKER_BUILD) -t arvados/sso sso
date >sso-image
# that are dependencies for every Arvados service.
passenger-image: base-image
+ @echo "Building passenger-image"
$(DOCKER_BUILD) -t arvados/passenger passenger
date >passenger-image
-base-image: debian-image $(BASE_DEPS)
+slurm-image: base-image $(SLURM_DEPS)
+ @echo "Building slurm-image"
+ $(DOCKER_BUILD) -t arvados/slurm slurm
+ date >slurm-image
+
+base-image: debian-arvados-image $(BASE_DEPS)
+ @echo "Building base-image"
$(DOCKER_BUILD) -t arvados/base base
date >base-image
-debian-image:
+debian-arvados-image:
+ @echo "Building debian-arvados-image"
./mkimage-debootstrap.sh arvados/debian wheezy ftp://ftp.us.debian.org/debian/
- date >debian-image
+ date >debian-arvados-image
+
+skydns-image:
+ @echo "Downloading skydns-image"
+ $(DOCKER) pull crosbymichael/skydns
+ date >skydns-image
+
+skydock-image:
+ @echo "Downloading skydock-image"
+ $(DOCKER) pull crosbymichael/skydock
+ date >skydock-image
projects / arvados.git / blobdiff