- runner = mock.MagicMock()
- runner.project_uuid = "zzzzz-8i9sb-zzzzzzzzzzzzzzz"
- runner.ignore_docker_for_reuse = False
- runner.num_retries = 0
- document_loader, avsc_names, schema_metadata, metaschema_loader = cwltool.process.get_schema("v1.0")
-
- list_images_in_arv.return_value = [["zzzzz-4zz18-zzzzzzzzzzzzzzz"]]
- runner.api.collections().get().execute.return_vaulue = {"portable_data_hash": "99999999999999999999999999999993+99"}
-
- tool = {
- "inputs": [],
- "outputs": [],
- "baseCommand": "ls",
- "arguments": [{"valueFrom": "$(runtime.outdir)"}]
- }
- make_fs_access=functools.partial(arvados_cwl.CollectionFsAccess, api_client=runner.api)
- arvtool = arvados_cwl.ArvadosCommandTool(runner, tool, work_api="jobs", avsc_names=avsc_names,
- basedir="", make_fs_access=make_fs_access, loader=Loader({}))
- arvtool.formatgraph = None
- for j in arvtool.job({}, mock.MagicMock(), basedir="", make_fs_access=make_fs_access):
- j.run()
- runner.api.jobs().create.assert_called_with(
- body={
- 'owner_uuid': 'zzzzz-8i9sb-zzzzzzzzzzzzzzz',
- 'runtime_constraints': {},
- 'script_parameters': {
- 'tasks': [{
- 'task.env': {'HOME': '$(task.outdir)', 'TMPDIR': '$(task.tmpdir)'},
- 'command': ['ls', '$(task.outdir)']
- }],
+ for enable_reuse in (True, False):
+ runner = mock.MagicMock()
+ runner.project_uuid = "zzzzz-8i9sb-zzzzzzzzzzzzzzz"
+ runner.ignore_docker_for_reuse = False
+ runner.num_retries = 0
+ document_loader, avsc_names, schema_metadata, metaschema_loader = cwltool.process.get_schema("v1.0")
+
+ list_images_in_arv.return_value = [["zzzzz-4zz18-zzzzzzzzzzzzzzz"]]
+ runner.api.collections().get().execute.return_vaulue = {"portable_data_hash": "99999999999999999999999999999993+99"}
+
+ tool = {
+ "inputs": [],
+ "outputs": [],
+ "baseCommand": "ls",
+ "arguments": [{"valueFrom": "$(runtime.outdir)"}]
+ }
+ make_fs_access=functools.partial(arvados_cwl.CollectionFsAccess, api_client=runner.api)
+ arvtool = arvados_cwl.ArvadosCommandTool(runner, tool, work_api="jobs", avsc_names=avsc_names,
+ basedir="", make_fs_access=make_fs_access, loader=Loader({}))
+ arvtool.formatgraph = None
+ for j in arvtool.job({}, mock.MagicMock(), basedir="", make_fs_access=make_fs_access):
+ j.run(enable_reuse=enable_reuse)
+ runner.api.jobs().create.assert_called_with(
+ body={
+ 'owner_uuid': 'zzzzz-8i9sb-zzzzzzzzzzzzzzz',
+ 'runtime_constraints': {},
+ 'script_parameters': {
+ 'tasks': [{
+ 'task.env': {'HOME': '$(task.outdir)', 'TMPDIR': '$(task.tmpdir)'},
+ 'command': ['ls', '$(task.outdir)']
+ }],
+ },
+ 'script_version': 'master',
+ 'minimum_script_version': '9e5b98e8f5f4727856b53447191f9c06e3da2ba6',
+ 'repository': 'arvados',
+ 'script': 'crunchrunner',
+ 'runtime_constraints': {
+ 'docker_image': 'arvados/jobs:'+arvados_cwl.__version__,
+ 'min_cores_per_node': 1,
+ 'min_ram_mb_per_node': 1024,
+ 'min_scratch_mb_per_node': 2048 # tmpdirSize + outdirSize
+ }