splitfastq(p)
else:
for i in xrange(0, len(p)):
- m = p[i]["reader"].as_manifest()[1:]
- manifest_list.append(["./_" + str(piece), m[:-1]])
+ m = p[i]["reader"].as_manifest().split()
+ m[0] = "./_" + str(piece)
+ manifest_list.append(m)
piece += 1
-manifest_text = "\n".join(" ".join(m) for m in manifest_list)
+manifest_text = "\n".join(" ".join(m) for m in manifest_list) + "\n"
arvados.current_task().set_output(manifest_text)