class Job < ArvadosModel
- include AssignUuid
+ include HasUuid
include KindAndEtag
include CommonApiTemplate
+ attr_protected :docker_image_locator
serialize :script_parameters, Hash
- serialize :resource_limits, Hash
+ serialize :runtime_constraints, Hash
serialize :tasks_summary, Hash
+ before_validation :find_docker_image_locator
before_create :ensure_unique_submit_id
before_create :ensure_script_version_is_commit
+ before_update :ensure_script_version_is_commit
+ after_commit :trigger_crunch_dispatch_if_cancelled, :on => :update
has_many :commit_ancestors, :foreign_key => :descendant, :primary_key => :script_version
class SubmitIdReused < StandardError
end
- api_accessible :superuser, :extend => :common do |t|
+ api_accessible :user, extend: :common do |t|
t.add :submit_id
t.add :priority
t.add :script
t.add :script_parameters
t.add :script_version
t.add :cancelled_at
- t.add :cancelled_by_client
- t.add :cancelled_by_user
+ t.add :cancelled_by_client_uuid
+ t.add :cancelled_by_user_uuid
t.add :started_at
t.add :finished_at
t.add :output
+ t.add :output_is_persistent
t.add :success
t.add :running
- t.add :is_locked_by
+ t.add :is_locked_by_uuid
t.add :log
- t.add :resource_limits
+ t.add :runtime_constraints
t.add :tasks_summary
t.add :dependencies
+ t.add :nondeterministic
+ t.add :repository
+ t.add :supplied_script_version
+ t.add :docker_image_locator
end
def assert_finished
end
def self.queue
- self.where('started_at is ? and is_locked_by is ? and cancelled_at is ?',
- nil, nil, nil).
+ self.where('started_at is ? and is_locked_by_uuid is ? and cancelled_at is ? and success is ?',
+ nil, nil, nil, nil).
+ order('priority desc, created_at')
+ end
+
+ def self.running
+ self.where('running = ?', true).
order('priority desc, created_at')
end
protected
+ def foreign_key_attributes
+ super + %w(output log)
+ end
+
+ def skip_uuid_read_permission_check
+ super + %w(cancelled_by_client_uuid)
+ end
+
+ def skip_uuid_existence_check
+ super + %w(output log)
+ end
+
def ensure_script_version_is_commit
- sha1 = Commit.find_by_commit_ish(self.script_version) rescue nil
- if sha1
- self.script_version = sha1
- else
- raise ArgumentError.new("Specified script_version does not resolve to a commit")
+ if self.is_locked_by_uuid and self.started_at
+ # Apparently client has already decided to go for it. This is
+ # needed to run a local job using a local working directory
+ # instead of a commit-ish.
+ return true
+ end
+ if new_record? or script_version_changed?
+ sha1 = Commit.find_commit_range(current_user, self.repository, nil, self.script_version, nil)[0] rescue nil
+ if sha1
+ self.supplied_script_version = self.script_version if self.supplied_script_version.nil? or self.supplied_script_version.empty?
+ self.script_version = sha1
+ else
+ raise ArgumentError.new("Specified script_version does not resolve to a commit")
+ end
end
end
true
end
+ def find_docker_image_locator
+ # Find the Collection that holds the Docker image specified in the
+ # runtime constraints, and store its locator in docker_image_locator.
+ image_search = runtime_constraints['docker_image']
+ image_tag = runtime_constraints['docker_image_tag']
+ if image_search.nil?
+ self.docker_image_locator = nil
+ elsif coll = Collection.for_latest_docker_image(image_search, image_tag)
+ self.docker_image_locator = coll.uuid
+ else
+ errors.add(:docker_image_locator, "not found for #{image_search}")
+ false
+ end
+ end
+
def dependencies
deps = {}
- self.script_parameters.values.each do |v|
- next unless v.is_a? String
- v.match(/^(([0-9a-f]{32})\b(\+[^,]+)?,?)*$/) do |locator|
- bare_locator = locator[0].gsub(/\+[^,]+/,'')
- deps[bare_locator] = true
+ queue = self.script_parameters.values
+ while not queue.empty?
+ queue = queue.flatten.compact.collect do |v|
+ if v.is_a? Hash
+ v.values
+ elsif v.is_a? String
+ v.match(/^(([0-9a-f]{32})\b(\+[^,]+)?,?)*$/) do |locator|
+ deps[locator.to_s] = true
+ end
+ nil
+ end
end
end
deps.keys
end
def permission_to_update
- if is_locked_by_was and !(current_user and
- current_user.uuid == is_locked_by_was)
+ if is_locked_by_uuid_was and !(current_user and
+ (current_user.uuid == is_locked_by_uuid_was or
+ current_user.uuid == system_user.uuid))
if script_changed? or
script_parameters_changed? or
script_version_changed? or
- cancelled_by_client_changed? or
- cancelled_by_user_changed? or
- cancelled_at_changed? or
+ (!cancelled_at_was.nil? and
+ (cancelled_by_client_uuid_changed? or
+ cancelled_by_user_uuid_changed? or
+ cancelled_at_changed?)) or
started_at_changed? or
finished_at_changed? or
running_changed? or
return false
end
end
- if !is_locked_by_changed?
+ if !is_locked_by_uuid_changed?
super
else
if !current_user
logger.warn "Anonymous user tried to change lock on #{self.class.to_s} #{uuid_was}"
false
- elsif is_locked_by_was and is_locked_by_was != current_user.uuid
- logger.warn "User #{current_user.uuid} tried to steal lock on #{self.class.to_s} #{uuid_was} from #{is_locked_by_was}"
+ elsif is_locked_by_uuid_was and is_locked_by_uuid_was != current_user.uuid
+ logger.warn "User #{current_user.uuid} tried to steal lock on #{self.class.to_s} #{uuid_was} from #{is_locked_by_uuid_was}"
false
- elsif !is_locked_by.nil? and is_locked_by != current_user.uuid
- logger.warn "User #{current_user.uuid} tried to lock #{self.class.to_s} #{uuid_was} with uuid #{is_locked_by}"
+ elsif !is_locked_by_uuid.nil? and is_locked_by_uuid != current_user.uuid
+ logger.warn "User #{current_user.uuid} tried to lock #{self.class.to_s} #{uuid_was} with uuid #{is_locked_by_uuid}"
false
else
super
end
end
end
+
+ def update_modified_by_fields
+ if self.cancelled_at_changed?
+ # Ensure cancelled_at cannot be set to arbitrary non-now times,
+ # or changed once it is set.
+ if self.cancelled_at and not self.cancelled_at_was
+ self.cancelled_at = Time.now
+ self.cancelled_by_user_uuid = current_user.uuid
+ self.cancelled_by_client_uuid = current_api_client.uuid
+ @need_crunch_dispatch_trigger = true
+ else
+ self.cancelled_at = self.cancelled_at_was
+ self.cancelled_by_user_uuid = self.cancelled_by_user_uuid_was
+ self.cancelled_by_client_uuid = self.cancelled_by_client_uuid_was
+ end
+ end
+ super
+ end
+
+ def trigger_crunch_dispatch_if_cancelled
+ if @need_crunch_dispatch_trigger
+ File.open(Rails.configuration.crunch_refresh_trigger, 'wb') do
+ # That's all, just create/touch a file for crunch-job to see.
+ end
+ end
+ end
end