class ApplicationController < ActionController::Base
+ include ArvadosApiClientHelper
+ include ApplicationHelper
+
respond_to :html, :json, :js
protect_from_forgery
+
+ ERROR_ACTIONS = [:render_error, :render_not_found]
+
around_filter :thread_clear
- around_filter :thread_with_mandatory_api_token, :except => [:render_exception, :render_not_found]
+ around_filter :thread_with_mandatory_api_token, except: ERROR_ACTIONS
around_filter :thread_with_optional_api_token
- before_filter :find_object_by_uuid, :except => [:index, :render_exception, :render_not_found]
- before_filter :check_user_agreements, :except => [:render_exception, :render_not_found]
- before_filter :check_user_notifications, :except => [:render_exception, :render_not_found]
+ before_filter :check_user_agreements, except: ERROR_ACTIONS
+ before_filter :check_user_notifications, except: ERROR_ACTIONS
+ before_filter :find_object_by_uuid, except: [:index] + ERROR_ACTIONS
theme :select_theme
begin
self.render_error status: 404
end
- def index
+ def find_objects_for_index
+ @limit ||= 200
if params[:limit]
- limit = params[:limit].to_i
- else
- limit = 200
+ @limit = params[:limit].to_i
end
+ @offset ||= 0
if params[:offset]
- offset = params[:offset].to_i
- else
- offset = 0
+ @offset = params[:offset].to_i
end
+ @filters ||= []
if params[:filters]
filters = params[:filters]
if filters.is_a? String
filters = Oj.load filters
end
- else
- filters = []
+ @filters += filters
end
- @objects ||= model_class.filter(filters).limit(limit).offset(offset).all
+ @objects ||= model_class
+ @objects = @objects.filter(@filters).limit(@limit).offset(@offset)
+ end
+
+ helper_method :next_page_offset
+ def next_page_offset
+ if @objects.respond_to?(:result_offset) and
+ @objects.respond_to?(:result_limit) and
+ @objects.respond_to?(:items_available)
+ next_offset = @objects.result_offset + @objects.result_limit
+ if next_offset < @objects.items_available
+ next_offset
+ else
+ nil
+ end
+ end
+ end
+
+ def index
+ find_objects_for_index if !@objects
respond_to do |f|
f.json { render json: @objects }
f.html { render }
return render_not_found("object not found")
end
respond_to do |f|
- f.json { render json: @object }
+ f.json { render json: @object.attributes.merge(href: url_for(@object)) }
f.html {
- if request.method == 'GET'
+ if request.method.in? ['GET', 'HEAD']
render
else
redirect_to params[:return_to] || @object
end
end
+ def choose
+ params[:limit] ||= 20
+ find_objects_for_index if !@objects
+ respond_to do |f|
+ if params[:partial]
+ f.json {
+ render json: {
+ content: render_to_string(partial: "choose_rows.html",
+ formats: [:html],
+ locals: {
+ multiple: params[:multiple]
+ }),
+ next_page_href: @next_page_href
+ }
+ }
+ end
+ f.js {
+ render partial: 'choose', locals: {multiple: params[:multiple]}
+ }
+ end
+ end
+
def render_content
if !@object
return render_not_found("object not found")
end
def update
- updates = params[@object.class.to_s.underscore.singularize.to_sym]
- updates.keys.each do |attr|
+ @updates ||= params[@object.resource_param_name.to_sym]
+ @updates.keys.each do |attr|
if @object.send(attr).is_a? Hash
- if updates[attr].is_a? String
- updates[attr] = Oj.load updates[attr]
+ if @updates[attr].is_a? String
+ @updates[attr] = Oj.load @updates[attr]
end
if params[:merge] || params["merge_#{attr}".to_sym]
# Merge provided Hash with current Hash, instead of
# replacing.
- updates[attr] = @object.send(attr).with_indifferent_access.
- deep_merge(updates[attr].with_indifferent_access)
+ @updates[attr] = @object.send(attr).with_indifferent_access.
+ deep_merge(@updates[attr].with_indifferent_access)
end
end
end
- if @object.update_attributes updates
+ if @object.update_attributes @updates
show
else
self.render_error status: 422
@new_resource_attrs.reject! { |k,v| k.to_s == 'uuid' }
@object ||= model_class.new @new_resource_attrs
@object.save!
+ show
+ end
- respond_to do |f|
- f.json { render json: @object }
- f.html {
- redirect_to(params[:return_to] || @object)
- }
- f.js { render }
+ # Clone the given object, merging any attribute values supplied as
+ # with a create action.
+ def copy
+ @new_resource_attrs ||= params[model_class.to_s.underscore.singularize]
+ @new_resource_attrs ||= {}
+ @object = @object.dup
+ @object.update_attributes @new_resource_attrs
+ if not @new_resource_attrs[:name] and @object.respond_to? :name
+ if @object.name and @object.name != ''
+ @object.name = "Copy of #{@object.name}"
+ else
+ @object.name = "Copy of unnamed #{@object.class_for_display.downcase}"
+ end
end
+ @object.save!
+ show
end
def destroy
end
def show_pane_list
- %w(Attributes Metadata JSON API)
+ %w(Attributes Advanced)
end
protected
-
+
+ def redirect_to_login
+ respond_to do |f|
+ f.html {
+ if request.method.in? ['GET', 'HEAD']
+ redirect_to arvados_api_client.arvados_login_url(return_to: request.url)
+ else
+ flash[:error] = "Either you are not logged in, or your session has timed out. I can't automatically log you in and re-attempt this request."
+ redirect_to :back
+ end
+ }
+ f.json {
+ @errors = ['You do not seem to be logged in. You did not supply an API token with this request, and your session (if any) has timed out.']
+ self.render_error status: 422
+ }
+ end
+ false # For convenience to return from callbacks
+ end
+
+ def using_specific_api_token(api_token)
+ start_values = {}
+ [:arvados_api_token, :user].each do |key|
+ start_values[key] = Thread.current[key]
+ end
+ Thread.current[:arvados_api_token] = api_token
+ Thread.current[:user] = nil
+ begin
+ yield
+ ensure
+ start_values.each_key { |key| Thread.current[key] = start_values[key] }
+ end
+ end
+
def find_object_by_uuid
if params[:id] and params[:id].match /\D/
params[:uuid] = params.delete :id
end
- if params[:uuid].is_a? String
- @object = model_class.find(params[:uuid])
+ if not model_class
+ @object = nil
+ elsif params[:uuid].is_a? String
+ if params[:uuid].empty?
+ @object = nil
+ else
+ if (model_class != Link and
+ resource_class_for_uuid(params[:uuid]) == Link)
+ @name_link = Link.find(params[:uuid])
+ @object = model_class.find(@name_link.head_uuid)
+ else
+ @object = model_class.find(params[:uuid])
+ end
+ end
else
@object = model_class.where(uuid: params[:uuid]).first
end
# call to verify its authenticity.
if verify_api_token
session[:arvados_api_token] = params[:api_token]
- if !request.format.json? and request.method == 'GET'
+ if !request.format.json? and request.method.in? ['GET', 'HEAD']
# Repeat this request with api_token in the (new) session
# cookie instead of the query string. This prevents API
# tokens from appearing in (and being inadvisedly copied
end
if try_redirect_to_login
unless login_optional
- respond_to do |f|
- f.html {
- if request.method == 'GET'
- redirect_to $arvados_api_client.arvados_login_url(return_to: request.url)
- else
- flash[:error] = "Either you are not logged in, or your session has timed out. I can't automatically log you in and re-attempt this request."
- redirect_to :back
- end
- }
- f.json {
- @errors = ['You do not seem to be logged in. You did not supply an API token with this request, and your session (if any) has timed out.']
- self.render_error status: 422
- }
- end
+ redirect_to_login
else
# login is optional for this route so go on to the regular controller
Thread.current[:arvados_api_token] = nil
end
def thread_with_mandatory_api_token
- thread_with_api_token do
- yield
+ thread_with_api_token(true) do
+ if Thread.current[:arvados_api_token]
+ yield
+ elsif session[:arvados_api_token]
+ # Expired session. Clear it before refreshing login so that,
+ # if this login procedure fails, we end up showing the "please
+ # log in" page instead of getting stuck in a redirect loop.
+ session.delete :arvados_api_token
+ redirect_to_login
+ else
+ render 'users/welcome'
+ end
end
end
yield
else
# We skipped thread_with_mandatory_api_token. Use the optional version.
- thread_with_api_token(true) do
+ thread_with_api_token(true) do
yield
end
end
end
def check_user_agreements
- if current_user && !current_user.is_active && current_user.is_invited
+ if current_user && !current_user.is_active
+ if not current_user.is_invited
+ return render 'users/inactive'
+ end
signatures = UserAgreement.signatures
@signed_ua_uuids = UserAgreement.signatures.map &:head_uuid
@required_user_agreements = UserAgreement.all.map do |ua|
@@notification_tests = []
@@notification_tests.push lambda { |controller, current_user|
- AuthorizedKey.limit(1).where(authorized_user_uuid: current_user.uuid).each do
+ AuthorizedKey.limit(1).where(authorized_user_uuid: current_user.uuid).each do
return nil
end
return lambda { |view|
@notifications = []
if current_user
- @showallalerts = false
+ @showallalerts = false
@@notification_tests.each do |t|
a = t.call(self, current_user)
if a
@notification_count = ''
end
end
+
+ helper_method :all_projects
+ def all_projects
+ @all_projects ||= Group.filter([['group_class','in',['project','folder']]])
+ end
+
+ helper_method :my_projects
+ def my_projects
+ return @my_projects if @my_projects
+ @my_projects = []
+ root_of = {}
+ all_projects.each do |g|
+ root_of[g.uuid] = g.owner_uuid
+ @my_projects << g
+ end
+ done = false
+ while not done
+ done = true
+ root_of = root_of.each_with_object({}) do |(child, parent), h|
+ if root_of[parent]
+ h[child] = root_of[parent]
+ done = false
+ else
+ h[child] = parent
+ end
+ end
+ end
+ @my_projects = @my_projects.select do |g|
+ root_of[g.uuid] == current_user.uuid
+ end
+ end
+
+ helper_method :projects_shared_with_me
+ def projects_shared_with_me
+ my_project_uuids = my_projects.collect &:uuid
+ all_projects.reject { |x| x.uuid.in? my_project_uuids }
+ end
+
+ helper_method :recent_jobs_and_pipelines
+ def recent_jobs_and_pipelines
+ in_my_projects = ['owner_uuid','in',my_projects.collect(&:uuid)]
+ (Job.limit(10).filter([in_my_projects]) |
+ PipelineInstance.limit(10).filter([in_my_projects])).
+ sort_by do |x|
+ x.finished_at || x.started_at || x.created_at rescue x.created_at
+ end
+ end
+
+ helper_method :get_object
+ def get_object uuid
+ if @get_object.nil? and @objects
+ @get_object = @objects.each_with_object({}) do |object, h|
+ h[object.uuid] = object
+ end
+ end
+ @get_object ||= {}
+ @get_object[uuid]
+ end
+
+ helper_method :project_breadcrumbs
+ def project_breadcrumbs
+ crumbs = []
+ current = @name_link || @object
+ while current
+ if current.is_a?(Group) and current.group_class.in?(['project','folder'])
+ crumbs.prepend current
+ end
+ if current.is_a? Link
+ current = Group.find?(current.tail_uuid)
+ else
+ current = Group.find?(current.owner_uuid)
+ end
+ end
+ crumbs
+ end
+
+ helper_method :current_project_uuid
+ def current_project_uuid
+ if @object.is_a? Group and @object.group_class.in?(['project','folder'])
+ @object.uuid
+ elsif @name_link.andand.tail_uuid
+ @name_link.tail_uuid
+ elsif @object and resource_class_for_uuid(@object.owner_uuid) == Group
+ @object.owner_uuid
+ else
+ nil
+ end
+ end
end
projects / arvados.git / blobdiff