5319: Add API migration for manifests with bad portable data hashes.

[arvados.git] / services / api / db / structure.sql

diff --git a/services/api/db/structure.sql b/services/api/db/structure.sql
index 16ac2c14274e18e2ba12e2f385cc717d968b692e..007d05ebb6fc74852f9c5297f65de2ae73a3a94b 100644 (file)
--- a/services/api/db/structure.sql
+++ b/services/api/db/structure.sql
@@ -159,17 +159,17 @@ CREATE TABLE collections (
     modified_by_user_uuid character varying(255),
     modified_at timestamp without time zone,
     portable_data_hash character varying(255),
-    redundancy integer,
-    redundancy_confirmed_by_client_uuid character varying(255),
-    redundancy_confirmed_at timestamp without time zone,
-    redundancy_confirmed_as integer,
+    replication_desired integer,
+    replication_confirmed_at timestamp without time zone,
+    replication_confirmed integer,
     updated_at timestamp without time zone NOT NULL,
     uuid character varying(255),
     manifest_text text,
     name character varying(255),
-    description character varying(255),
+    description character varying(524288),
     properties text,
-    expires_at date
+    expires_at date,
+    file_names character varying(8192)
 );
 
 
@@ -272,7 +272,7 @@ CREATE TABLE groups (
     modified_by_user_uuid character varying(255),
     modified_at timestamp without time zone,
     name character varying(255) NOT NULL,
-    description text,
+    description character varying(524288),
     updated_at timestamp without time zone NOT NULL,
     group_class character varying(255)
 );
@@ -431,7 +431,7 @@ CREATE TABLE jobs (
     supplied_script_version character varying(255),
     docker_image_locator character varying(255),
     priority integer DEFAULT 0 NOT NULL,
-    description text,
+    description character varying(524288),
     state character varying(255),
     arvados_sdk_version character varying(255)
 );
@@ -685,9 +685,9 @@ CREATE TABLE pipeline_instances (
     properties text,
     state character varying(255),
     components_summary text,
-    description text,
     started_at timestamp without time zone,
-    finished_at timestamp without time zone
+    finished_at timestamp without time zone,
+    description character varying(524288)
 );
 
 
@@ -725,7 +725,7 @@ CREATE TABLE pipeline_templates (
     name character varying(255),
     components text,
     updated_at timestamp without time zone NOT NULL,
-    description text
+    description character varying(524288)
 );
 
 
@@ -1282,7 +1282,7 @@ ALTER TABLE ONLY virtual_machines
 -- Name: api_client_authorizations_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX api_client_authorizations_search_index ON api_client_authorizations USING btree (api_token, created_by_ip_address, last_used_by_ip_address, default_owner_uuid, scopes);
+CREATE INDEX api_client_authorizations_search_index ON api_client_authorizations USING btree (api_token, created_by_ip_address, last_used_by_ip_address, default_owner_uuid);
 
 
 --
@@ -1296,21 +1296,35 @@ CREATE INDEX api_clients_search_index ON api_clients USING btree (uuid, owner_uu
 -- Name: authorized_keys_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX authorized_keys_search_index ON authorized_keys USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, name, key_type, authorized_user_uuid, public_key);
+CREATE INDEX authorized_keys_search_index ON authorized_keys USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, name, key_type, authorized_user_uuid);
 
 
 --
 -- Name: collection_owner_uuid_name_unique; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE UNIQUE INDEX collection_owner_uuid_name_unique ON collections USING btree (owner_uuid, name);
+CREATE UNIQUE INDEX collection_owner_uuid_name_unique ON collections USING btree (owner_uuid, name) WHERE (expires_at IS NULL);
+
+
+--
+-- Name: collections_full_text_search_idx; Type: INDEX; Schema: public; Owner: -; Tablespace: 
+--
+
+CREATE INDEX collections_full_text_search_idx ON collections USING gin (to_tsvector('english'::regconfig, (((((((((((((((((COALESCE(owner_uuid, ''::character varying))::text || ' '::text) || (COALESCE(modified_by_client_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(modified_by_user_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(portable_data_hash, ''::character varying))::text) || ' '::text) || (COALESCE(uuid, ''::character varying))::text) || ' '::text) || (COALESCE(name, ''::character varying))::text) || ' '::text) || (COALESCE(description, ''::character varying))::text) || ' '::text) || COALESCE(properties, ''::text)) || ' '::text) || (COALESCE(file_names, ''::character varying))::text)));
 
 
 --
 -- Name: collections_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX collections_search_index ON collections USING btree (owner_uuid, modified_by_client_uuid, modified_by_user_uuid, portable_data_hash, redundancy_confirmed_by_client_uuid, uuid, manifest_text, name, description, properties);
+CREATE INDEX collections_search_index ON collections USING btree (owner_uuid, modified_by_client_uuid, modified_by_user_uuid, portable_data_hash, uuid, name, file_names);
+
+
+--
+-- Name: groups_full_text_search_idx; Type: INDEX; Schema: public; Owner: -; Tablespace: 
+--
+
+CREATE INDEX groups_full_text_search_idx ON groups USING gin (to_tsvector('english'::regconfig, (((((((((((((COALESCE(uuid, ''::character varying))::text || ' '::text) || (COALESCE(owner_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(modified_by_client_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(modified_by_user_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(name, ''::character varying))::text) || ' '::text) || (COALESCE(description, ''::character varying))::text) || ' '::text) || (COALESCE(group_class, ''::character varying))::text)));
 
 
 --
@@ -1324,14 +1338,14 @@ CREATE UNIQUE INDEX groups_owner_uuid_name_unique ON groups USING btree (owner_u
 -- Name: groups_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX groups_search_index ON groups USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, name, description, group_class);
+CREATE INDEX groups_search_index ON groups USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, name, group_class);
 
 
 --
 -- Name: humans_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX humans_search_index ON humans USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, properties);
+CREATE INDEX humans_search_index ON humans USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid);
 
 
 --
@@ -1982,14 +1996,21 @@ CREATE UNIQUE INDEX index_virtual_machines_on_uuid ON virtual_machines USING btr
 -- Name: job_tasks_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX job_tasks_search_index ON job_tasks USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, job_uuid, parameters, output, created_by_job_task_uuid);
+CREATE INDEX job_tasks_search_index ON job_tasks USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, job_uuid, created_by_job_task_uuid);
+
+
+--
+-- Name: jobs_full_text_search_idx; Type: INDEX; Schema: public; Owner: -; Tablespace: 
+--
+
+CREATE INDEX jobs_full_text_search_idx ON jobs USING gin (to_tsvector('english'::regconfig, (((((((((((((((((((((((((((((((((((((((((COALESCE(uuid, ''::character varying))::text || ' '::text) || (COALESCE(owner_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(modified_by_client_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(modified_by_user_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(submit_id, ''::character varying))::text) || ' '::text) || (COALESCE(script, ''::character varying))::text) || ' '::text) || (COALESCE(script_version, ''::character varying))::text) || ' '::text) || COALESCE(script_parameters, ''::text)) || ' '::text) || (COALESCE(cancelled_by_client_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(cancelled_by_user_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(output, ''::character varying))::text) || ' '::text) || (COALESCE(is_locked_by_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(log, ''::character varying))::text) || ' '::text) || COALESCE(tasks_summary, ''::text)) || ' '::text) || COALESCE(runtime_constraints, ''::text)) || ' '::text) || (COALESCE(repository, ''::character varying))::text) || ' '::text) || (COALESCE(supplied_script_version, ''::character varying))::text) || ' '::text) || (COALESCE(docker_image_locator, ''::character varying))::text) || ' '::text) || (COALESCE(description, ''::character varying))::text) || ' '::text) || (COALESCE(state, ''::character varying))::text) || ' '::text) || (COALESCE(arvados_sdk_version, ''::character varying))::text)));
 
 
 --
 -- Name: jobs_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX jobs_search_index ON jobs USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, submit_id, script, script_version, script_parameters, cancelled_by_client_uuid, cancelled_by_user_uuid, output, is_locked_by_uuid, log, tasks_summary, runtime_constraints, repository, supplied_script_version, docker_image_locator, description, state, arvados_sdk_version);
+CREATE INDEX jobs_search_index ON jobs USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, submit_id, script, script_version, cancelled_by_client_uuid, cancelled_by_user_uuid, output, is_locked_by_uuid, log, repository, supplied_script_version, docker_image_locator, state, arvados_sdk_version);
 
 
 --
@@ -2010,7 +2031,7 @@ CREATE INDEX keep_services_search_index ON keep_services USING btree (uuid, owne
 -- Name: links_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX links_search_index ON links USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, tail_uuid, link_class, name, head_uuid, properties);
+CREATE INDEX links_search_index ON links USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, tail_uuid, link_class, name, head_uuid);
 
 
 --
@@ -2024,21 +2045,28 @@ CREATE UNIQUE INDEX links_tail_name_unique_if_link_class_name ON links USING btr
 -- Name: logs_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX logs_search_index ON logs USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, object_uuid, event_type, summary, properties, object_owner_uuid);
+CREATE INDEX logs_search_index ON logs USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, object_uuid, event_type, object_owner_uuid);
 
 
 --
 -- Name: nodes_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX nodes_search_index ON nodes USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, hostname, domain, ip_address, info, properties, job_uuid);
+CREATE INDEX nodes_search_index ON nodes USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, hostname, domain, ip_address, job_uuid);
+
+
+--
+-- Name: pipeline_instances_full_text_search_idx; Type: INDEX; Schema: public; Owner: -; Tablespace: 
+--
+
+CREATE INDEX pipeline_instances_full_text_search_idx ON pipeline_instances USING gin (to_tsvector('english'::regconfig, (((((((((((((((((((((COALESCE(uuid, ''::character varying))::text || ' '::text) || (COALESCE(owner_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(modified_by_client_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(modified_by_user_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(pipeline_template_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(name, ''::character varying))::text) || ' '::text) || COALESCE(components, ''::text)) || ' '::text) || COALESCE(properties, ''::text)) || ' '::text) || (COALESCE(state, ''::character varying))::text) || ' '::text) || COALESCE(components_summary, ''::text)) || ' '::text) || (COALESCE(description, ''::character varying))::text)));
 
 
 --
 -- Name: pipeline_instances_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX pipeline_instances_search_index ON pipeline_instances USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, pipeline_template_uuid, name, components, properties, state, components_summary, description);
+CREATE INDEX pipeline_instances_search_index ON pipeline_instances USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, pipeline_template_uuid, name, state);
 
 
 --
@@ -2048,11 +2076,18 @@ CREATE INDEX pipeline_instances_search_index ON pipeline_instances USING btree (
 CREATE UNIQUE INDEX pipeline_template_owner_uuid_name_unique ON pipeline_templates USING btree (owner_uuid, name);
 
 
+--
+-- Name: pipeline_templates_full_text_search_idx; Type: INDEX; Schema: public; Owner: -; Tablespace: 
+--
+
+CREATE INDEX pipeline_templates_full_text_search_idx ON pipeline_templates USING gin (to_tsvector('english'::regconfig, (((((((((((((COALESCE(uuid, ''::character varying))::text || ' '::text) || (COALESCE(owner_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(modified_by_client_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(modified_by_user_uuid, ''::character varying))::text) || ' '::text) || (COALESCE(name, ''::character varying))::text) || ' '::text) || COALESCE(components, ''::text)) || ' '::text) || (COALESCE(description, ''::character varying))::text)));
+
+
 --
 -- Name: pipeline_templates_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX pipeline_templates_search_index ON pipeline_templates USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, name, components, description);
+CREATE INDEX pipeline_templates_search_index ON pipeline_templates USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, name);
 
 
 --
@@ -2066,14 +2101,14 @@ CREATE INDEX repositories_search_index ON repositories USING btree (uuid, owner_
 -- Name: specimens_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX specimens_search_index ON specimens USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, material, properties);
+CREATE INDEX specimens_search_index ON specimens USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, material);
 
 
 --
 -- Name: traits_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX traits_search_index ON traits USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, name, properties);
+CREATE INDEX traits_search_index ON traits USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, name);
 
 
 --
@@ -2087,7 +2122,7 @@ CREATE UNIQUE INDEX unique_schema_migrations ON schema_migrations USING btree (v
 -- Name: users_search_index; Type: INDEX; Schema: public; Owner: -; Tablespace: 
 --
 
-CREATE INDEX users_search_index ON users USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, email, first_name, last_name, identity_url, prefs, default_owner_uuid);
+CREATE INDEX users_search_index ON users USING btree (uuid, owner_uuid, modified_by_client_uuid, modified_by_user_uuid, email, first_name, last_name, identity_url, default_owner_uuid);
 
 
 --
@@ -2309,4 +2344,22 @@ INSERT INTO schema_migrations (version) VALUES ('20141111133038');
 
 INSERT INTO schema_migrations (version) VALUES ('20141208164553');
 
-INSERT INTO schema_migrations (version) VALUES ('20141208185217');
\ No newline at end of file
+INSERT INTO schema_migrations (version) VALUES ('20141208174553');
+
+INSERT INTO schema_migrations (version) VALUES ('20141208174653');
+
+INSERT INTO schema_migrations (version) VALUES ('20141208185217');
+
+INSERT INTO schema_migrations (version) VALUES ('20150122175935');
+
+INSERT INTO schema_migrations (version) VALUES ('20150123142953');
+
+INSERT INTO schema_migrations (version) VALUES ('20150203180223');
+
+INSERT INTO schema_migrations (version) VALUES ('20150206210804');
+
+INSERT INTO schema_migrations (version) VALUES ('20150206230342');
+
+INSERT INTO schema_migrations (version) VALUES ('20150216193428');
+
+INSERT INTO schema_migrations (version) VALUES ('20150303210106');
\ No newline at end of file