_disallowed_filename_characters = re.compile('[\x00/]')
class SafeApi(object):
- '''Threadsafe wrapper for API object. This stores and returns a different api
- object per thread, because httplib2 which underlies apiclient is not
- threadsafe.
- '''
+ """Threadsafe wrapper for API object.
+
+ This stores and returns a different api object per thread, because
+ httplib2 which underlies apiclient is not threadsafe.
+ """
def __init__(self, config):
self.host = config.get('ARVADOS_API_HOST')
def localapi(self):
if 'api' not in self.local.__dict__:
- self.local.api = arvados.api('v1', False, self.host,
- self.api_token, self.insecure)
+ self.local.api = arvados.api(
+ version='v1',
+ host=self.host, token=self.api_token, insecure=self.insecure)
return self.local.api
def localkeep(self):
def convertTime(t):
- '''Parse Arvados timestamp to unix time.'''
+ """Parse Arvados timestamp to unix time."""
+ if not t:
+ return 0
try:
return calendar.timegm(time.strptime(t, "%Y-%m-%dT%H:%M:%SZ"))
except (TypeError, ValueError):
n.clear()
llfuse.invalidate_entry(self.inode, str(n))
self.inodes.del_entry(oldentries[n])
+ llfuse.invalidate_inode(self.inode)
self.invalidate()
def mtime(self):
self.collection_object = None
if isinstance(collection, dict):
self.collection_locator = collection['uuid']
+ self._mtime = convertTime(collection.get('modified_at'))
else:
self.collection_locator = collection
+ self._mtime = 0
def same(self, i):
return i['uuid'] == self.collection_locator or i['portable_data_hash'] == self.collection_locator
- def new_collection(self, new_collection_object):
+ # Used by arv-web.py to switch the contents of the CollectionDirectory
+ def change_collection(self, new_locator):
+ """Switch the contents of the CollectionDirectory. Must be called with llfuse.lock held."""
+ self.collection_locator = new_locator
+ self.collection_object = None
+ self.update()
+
+ def new_collection(self, new_collection_object, coll_reader):
self.collection_object = new_collection_object
+ self._mtime = convertTime(self.collection_object.get('modified_at'))
+
if self.collection_object_file is not None:
self.collection_object_file.update(self.collection_object)
self.clear()
- collection = arvados.CollectionReader(
- self.collection_object["manifest_text"], self.api,
- self.api.localkeep(), num_retries=self.num_retries)
- collection.normalize()
- for s in collection.all_streams():
+ for s in coll_reader.all_streams():
cwd = self
for part in s.name().split('/'):
if part != '' and part != '.':
if self.collection_object is not None and portable_data_hash_pattern.match(self.collection_locator):
return True
+ if self.collection_locator is None:
+ self.fresh()
+ return True
+
with llfuse.lock_released:
- new_collection_object = self.api.collections().get(
- uuid=self.collection_locator
- ).execute(num_retries=self.num_retries)
+ coll_reader = arvados.CollectionReader(
+ self.collection_locator, self.api, self.api.localkeep(),
+ num_retries=self.num_retries)
+ new_collection_object = coll_reader.api_response() or {}
+ # If the Collection only exists in Keep, there will be no API
+ # response. Fill in the fields we need.
+ if 'uuid' not in new_collection_object:
+ new_collection_object['uuid'] = self.collection_locator
if "portable_data_hash" not in new_collection_object:
new_collection_object["portable_data_hash"] = new_collection_object["uuid"]
+ if 'manifest_text' not in new_collection_object:
+ new_collection_object['manifest_text'] = coll_reader.manifest_text()
+ coll_reader.normalize()
# end with llfuse.lock_released, re-acquire lock
if self.collection_object is None or self.collection_object["portable_data_hash"] != new_collection_object["portable_data_hash"]:
- self.new_collection(new_collection_object)
+ self.new_collection(new_collection_object, coll_reader)
self.fresh()
return True
- except apiclient.errors.HttpError as e:
- if e.resp.status == 404:
- _logger.warn("arv-mount %s: not found", self.collection_locator)
- else:
- _logger.error("arv-mount %s: error", self.collection_locator)
- _logger.exception(detail)
+ except arvados.errors.NotFoundError:
+ _logger.exception("arv-mount %s: error", self.collection_locator)
except arvados.errors.ArgumentError as detail:
_logger.warning("arv-mount %s: error %s", self.collection_locator, detail)
if self.collection_object is not None and "manifest_text" in self.collection_object:
_logger.warning("arv-mount manifest_text is: %s", self.collection_object["manifest_text"])
- except Exception as detail:
- _logger.error("arv-mount %s: error", self.collection_locator)
+ except Exception:
+ _logger.exception("arv-mount %s: error", self.collection_locator)
if self.collection_object is not None and "manifest_text" in self.collection_object:
_logger.error("arv-mount manifest_text is: %s", self.collection_object["manifest_text"])
- _logger.exception(detail)
return False
def __getitem__(self, item):
else:
return super(CollectionDirectory, self).__contains__(k)
- def mtime(self):
- self.checkupdate()
- return convertTime(self.collection_object["modified_at"]) if self.collection_object is not None and 'modified_at' in self.collection_object else 0
-
class MagicDirectory(Directory):
'''A special directory that logically contains the set of all extant keep
super(RecursiveInvalidateDirectory, self).invalidate()
for a in self._entries:
self._entries[a].invalidate()
- except Exception as e:
- _logger.exception(e)
+ except Exception:
+ _logger.exception()
finally:
if self.inode == llfuse.ROOT_INODE:
llfuse.lock.release()
).execute(num_retries=self.num_retries)
if "items" in tags:
self.merge(tags['items'],
- lambda i: i['name'] if 'name' in i else i['uuid'],
- lambda a, i: a.tag == i,
+ lambda i: i['name'],
+ lambda a, i: a.tag == i['name'],
lambda i: TagDirectory(self.inode, self.inodes, self.api, self.num_retries, i['name'], poll=self._poll, poll_time=self._poll_time))
self.project_object = project_object
self.project_object_file = None
self.uuid = project_object['uuid']
+ self._poll = poll
+ self._poll_time = poll_time
def createDirectory(self, i):
if collection_uuid_pattern.match(i['uuid']):
lambda i: i[0],
lambda a, i: a.uuid == i[1]['uuid'],
lambda i: ProjectDirectory(self.inode, self.inodes, self.api, self.num_retries, i[1], poll=self._poll, poll_time=self._poll_time))
- except Exception as e:
- _logger.exception(e)
+ except Exception:
+ _logger.exception()
class FileHandle(object):
entry.st_mode = stat.S_IRUSR | stat.S_IRGRP | stat.S_IROTH
if isinstance(e, Directory):
entry.st_mode |= stat.S_IXUSR | stat.S_IXGRP | stat.S_IXOTH | stat.S_IFDIR
+ elif isinstance(e, StreamReaderFile):
+ entry.st_mode |= stat.S_IXUSR | stat.S_IXGRP | stat.S_IXOTH | stat.S_IFREG
else:
entry.st_mode |= stat.S_IFREG
except arvados.errors.NotFoundError as e:
_logger.warning("Block not found: " + str(e))
raise llfuse.FUSEError(errno.EIO)
- except Exception as e:
- _logger.exception(e)
+ except Exception:
+ _logger.exception()
raise llfuse.FUSEError(errno.EIO)
def release(self, fh):
projects / arvados.git / blobdiff