Merge branch '8784-dir-listings'

[arvados.git] / doc / user / topics / tutorial-job1.html.textile.liquid

diff --git a/doc/user/topics/tutorial-job1.html.textile.liquid b/doc/user/topics/tutorial-job1.html.textile.liquid
index d2fb309b61514ee399debb3ad8d784eacd435581..34c452a900be2546c314444a41a54b61a92a25e1 100644 (file)
--- a/doc/user/topics/tutorial-job1.html.textile.liquid
+++ b/doc/user/topics/tutorial-job1.html.textile.liquid
@@ -3,6 +3,11 @@ layout: default
 navsection: userguide
 title: "Running a Crunch job on the command line"
 ...
+{% comment %}
+Copyright (C) The Arvados Authors. All rights reserved.
+
+SPDX-License-Identifier: CC-BY-SA-3.0
+{% endcomment %}
 
 This tutorial introduces how to run individual Crunch jobs using the @arv@ command line tool.
 
@@ -34,7 +39,7 @@ EOF
 * @cat@ is a standard Unix utility that writes a sequence of input to standard output.
 * @<<EOF@ tells the shell to direct the following lines into the standard input for @cat@ up until it sees the line @EOF@.
 * @>~/the_job@ redirects standard output to a file called @~/the_job@.
-* @"repository"@ is the name of a Git repository to search for the script version.  You can access a list of available git repositories on the Arvados Workbench under "*Code repositories*":https://{{site.arvados_workbench_host}}/repositories.
+* @"repository"@ is the name of a Git repository to search for the script version.  You can access a list of available git repositories on the Arvados Workbench under "*Code repositories*":{{site.arvados_workbench_host}}/repositories.
 * @"script_version"@ specifies the version of the script that you wish to run.  This can be in the form of an explicit Git revision hash, a tag, or a branch.  Arvados logs the script version that was used in the run, enabling you to go back and re-run any past job with the guarantee that the exact same code will be used as was used in the previous run.
 * @"script"@ specifies the name of the script to run.  The script must be given relative to the @crunch_scripts/@ subdirectory of the Git repository.
 * @"script_parameters"@ are provided to the script.  In this case, the input is the PGP data Collection that we "put in Keep earlier":{{site.baseurl}}/user/tutorials/tutorial-keep.html.
@@ -73,10 +78,7 @@ Use @arv job create@ to actually submit the job.  It should print out a JSON obj
  "is_locked_by_uuid":null,
  "log":null,
  "runtime_constraints":{},
- "tasks_summary":{},
- "dependencies":[
-  "c1bad4b39ca5a924e481008009d94e32+210"
- ]
+ "tasks_summary":{}
 }
 </code></pre>
 </notextile>
@@ -88,11 +90,11 @@ The job is now queued and will start running as soon as it reaches the front of
 
 h2. Monitor job progress
 
-Go to "*Recent jobs*":https://{{site.arvados_workbench_host}}/jobs in the Workbench.  Your job should be near the top of the table.  This table refreshes automatically.  When the job has completed successfully, it will show <span class="label label-success">finished</span> in the *Status* column.
+Go to "*Recent jobs*":{{site.arvados_workbench_host}}/jobs in Workbench.  Your job should be near the top of the table.  This table refreshes automatically.  When the job has completed successfully, it will show <span class="label label-success">finished</span> in the *Status* column.
 
 h2. Inspect the job output
 
-On the "Workbench dashboard":https://{{site.arvados_workbench_host}}, look for the *Output* column of the *Recent jobs* table.  Click on the link under *Output* for your job to go to the files page with the job output.  The files page lists all the files that were output by the job.  Click on the link under the *file* column to view a file, or click on the download icon <span class="glyphicon glyphicon-download-alt"></span> to download the output file.
+On the "Workbench Dashboard":{{site.arvados_workbench_host}}, look for the *Output* column of the *Recent jobs* table.  Click on the link under *Output* for your job to go to the files page with the job output.  The files page lists all the files that were output by the job.  Click on the link under the *file* column to view a file, or click on the download button <span class="glyphicon glyphicon-download-alt"></span> to download the output file.
 
 On the command line, you can use @arv job get@ to access a JSON object describing the output:
 
@@ -132,10 +134,7 @@ On the command line, you can use @arv job get@ to access a JSON object describin
   "running":0,
   "failed":0,
   "todo":0
- },
- "dependencies":[
-  "c1bad4b39ca5a924e481008009d94e32+210"
- ]
+ }
 }
 </code></pre>
 </notextile>
@@ -162,7 +161,7 @@ This MD5 hash matches the MD5 hash which we "computed earlier":{{site.baseurl}}/
 
 h2. The job log
 
-When the job completes, you can access the job log.  On the Workbench, visit "*Recent jobs*":https://{{site.arvados_workbench_host}}/jobs %(rarr)&rarr;% your job's UUID under the *uuid* column %(rarr)&rarr;% the collection link on the *log* row.
+When the job completes, you can access the job log.  On the Workbench, visit "*Recent jobs*":{{site.arvados_workbench_host}}/jobs %(rarr)&rarr;% your job's UUID under the *uuid* column %(rarr)&rarr;% the collection link on the *log* row.
 
 On the command line, the Keep identifier listed in the @"log"@ field from @arv job get@ specifies a collection.  You can list the files in the collection: