else
return m[1]
end
- # Collection.where(uuid: ['contains', m[1]]).each do |u|
- # puts "fixup #{uuid} to #{u.uuid}"
- # return u.uuid
- # end
- #end
else
nil
end
#"\"#{uuid}\" [label=\"#{rsc}\\n#{uuid}\",href=\"#{href}\"];\n"
if rsc == Collection
- #puts uuid
- if uuid == :"d41d8cd98f00b204e9800998ecf8427e+0"
+ if Collection.is_empty_blob_locator? uuid.to_s
# special case
- #puts "empty!"
return "\"#{uuid}\" [label=\"(empty collection)\"];\n"
end
- #puts "#{uuid.class} #{@pdata[uuid]}"
if @pdata[uuid]
- #puts @pdata[uuid]
if @pdata[uuid][:name]
return "\"#{uuid}\" [label=\"#{@pdata[uuid][:name]}\",href=\"#{href}\",shape=oval,#{bgcolor}];\n"
else
if i < files.length
label += "\\n⋮"
end
- #puts "#{uuid} #{label} #{files}"
extra_s = @node_extra[uuid].andand.map { |k,v|
"#{k}=\"#{v}\""
}.andand.join ","
end
unless node == ""
node += "']"
- #puts node
- #id = "#{job[:uuid]}_#{prefix}"
gr += "\"#{node}\" [label=\"#{node}\"];\n"
gr += edge(job_uuid(job), node, {:label => prefix})
end
when String
return '' if sp.empty?
m = GenerateGraph::collection_uuid(sp)
- #puts "#{m} pdata is #{@pdata[m.intern]}"
if m and (@pdata[m.intern] or (not @opts[:pdata_only]))
gr += edge(job_uuid(job), m, {:label => prefix})
gr += generate_provenance_edges(m)
elsif @opts[:all_script_parameters]
- #id = "#{job[:uuid]}_#{prefix}"
gr += "\"#{sp}\" [label=\"#{sp}\"];\n"
gr += edge(job_uuid(job), sp, {:label => prefix})
end
uuid = uuid.intern if uuid
if (not uuid) or uuid.empty? or @visited[uuid]
-
- #puts "already @visited #{uuid}"
return ""
end
@visited[uuid] = true
end
- #puts "visiting #{uuid.inspect}"
-
if m
# uuid is a collection
- if uuid != :"d41d8cd98f00b204e9800998ecf8427e+0"
- # not the empty collection
-
+ if not Collection.is_empty_blob_locator? uuid.to_s
@pdata.each do |k, job|
if job[:output] == uuid.to_s
extra = { label: 'output' }
end
end
- #puts "finished #{uuid}"
-
gr
end
gr += "edge [dir=back];"
end
- #puts "@pdata is #{pdata}"
-
g = GenerateGraph.new(pdata, opts)
pdata.each do |k, v|
gr += "}"
svg = ""
- #puts gr
-
require 'open3'
Open3.popen2("dot", "-Tsvg") do |stdin, stdout, wait_thr|