Merge branch '12707-storage-classes-columns'

[arvados.git] / sdk / cwl / arvados_cwl / __init__.py

diff --git a/sdk/cwl/arvados_cwl/__init__.py b/sdk/cwl/arvados_cwl/__init__.py
index a55db8d53ebeab4cc0567700945bf124f4d9158b..4701b4d8f13a29a2c1dc8f3bc5558de788a5a1fa 100644 (file)
--- a/sdk/cwl/arvados_cwl/__init__.py
+++ b/sdk/cwl/arvados_cwl/__init__.py
@@ -282,7 +282,7 @@ class ArvCwlRunner(object):
 
         def rewrite(fileobj):
             fileobj["location"] = generatemapper.mapper(fileobj["location"]).target
-            for k in ("basename", "listing", "contents", "nameext", "nameroot", "dirname"):
+            for k in ("listing", "contents", "nameext", "nameroot", "dirname"):
                 if k in fileobj:
                     del fileobj[k]
 
@@ -405,6 +405,7 @@ class ArvCwlRunner(object):
                         "success")
 
         self.ignore_docker_for_reuse = kwargs.get("ignore_docker_for_reuse")
+        self.eval_timeout = kwargs.get("eval_timeout")
 
         kwargs["make_fs_access"] = make_fs_access
         kwargs["enable_reuse"] = kwargs.get("enable_reuse")
@@ -413,6 +414,8 @@ class ArvCwlRunner(object):
         kwargs["compute_checksum"] = kwargs.get("compute_checksum")
 
         if self.work_api == "containers":
+            if self.ignore_docker_for_reuse:
+                raise validate.ValidationException("--ignore-docker-for-reuse not supported with containers API.")
             kwargs["outdir"] = "/var/spool/cwl"
             kwargs["docker_outdir"] = "/var/spool/cwl"
             kwargs["tmpdir"] = "/tmp"