--short Skip (or scale down) some slow tests.
--interactive Set up, then prompt for test/install steps to perform.
WORKSPACE=path Arvados source tree to test.
-CONFIGSRC=path Dir with api server config files to copy into source tree.
- (If none given, leave config files alone in source tree.)
+CONFIGSRC=path Dir with config.yml file containing PostgreSQL section for use by tests. (required)
services/api_test="TEST=test/functional/arvados/v1/collections_controller_test.rb"
Restrict apiserver tests to the given file
sdk/python_test="--test-suite tests.test_keep_locator"
lib/controller/router
lib/controller/rpc
lib/crunchstat
+lib/crunch-run
lib/cloud
lib/cloud/azure
lib/cloud/cloudtest
lib/dispatchcloud/scheduler
lib/dispatchcloud/ssh_executor
lib/dispatchcloud/worker
+lib/mount
lib/service
services/api
services/arv-git-httpd
services/login-sync
services/nodemanager
services/nodemanager_integration
-services/crunch-run
services/crunch-dispatch-local
services/crunch-dispatch-slurm
services/ws
[[ -n "${skip[sanity]}" ]] && return 0
( [[ -n "$WORKSPACE" ]] && [[ -d "$WORKSPACE/services" ]] ) \
|| fatal "WORKSPACE environment variable not set to a source directory (see: $0 --help)"
+ [[ -n "$CONFIGSRC" ]] \
+ || fatal "CONFIGSRC environment not set (see: $0 --help)"
+ [[ -s "$CONFIGSRC/config.yml" ]] \
+ || fatal "'$CONFIGSRC/config.yml' is empty or not found (see: $0 --help)"
echo Checking dependencies:
echo "locale: ${LANG}"
[[ "$(locale charmap)" = "UTF-8" ]] \
# needed for pkgdown, builds R SDK doc pages
which pandoc || fatal "No pandoc. Try: apt-get install pandoc"
fi
+ echo 'procs with /dev/fuse open:'
+ find /proc/*/fd -lname /dev/fuse 2>/dev/null | cut -d/ -f3 | xargs --no-run-if-empty ps -lywww
+ echo 'grep fuse /proc/self/mountinfo:'
+ grep fuse /proc/self/mountinfo
}
rotate_logfile() {
checkhealth() {
svc="$1"
- port="$(cat "$WORKSPACE/tmp/${svc}.port")"
- scheme=http
- if [[ ${svc} =~ -ssl$ || ${svc} = wss ]]; then
- scheme=https
- fi
- url="$scheme://localhost:${port}/_health/ping"
+ base=$(python -c "import yaml; print list(yaml.safe_load(file('$ARVADOS_CONFIG'))['Clusters']['zzzzz']['Services']['$1']['InternalURLs'].keys())[0]")
+ url="$base/_health/ping"
if ! curl -Ss -H "Authorization: Bearer e687950a23c3a9bceec28c6223a06c79" "${url}" | tee -a /dev/stderr | grep '"OK"'; then
echo "${url} failed"
return 1
fi
all_services_stopped=
fail=1
+
cd "$WORKSPACE" \
&& eval $(python sdk/python/tests/run_test_server.py start --auth admin) \
&& export ARVADOS_TEST_API_HOST="$ARVADOS_API_HOST" \
&& export ARVADOS_TEST_API_INSTALLED="$$" \
&& checkpidfile api \
&& checkdiscoverydoc $ARVADOS_API_HOST \
+ && eval $(python sdk/python/tests/run_test_server.py start_nginx) \
+ && checkpidfile nginx \
&& python sdk/python/tests/run_test_server.py start_controller \
&& checkpidfile controller \
- && checkhealth controller \
+ && checkhealth Controller \
+ && checkdiscoverydoc $ARVADOS_API_HOST \
&& python sdk/python/tests/run_test_server.py start_keep_proxy \
&& checkpidfile keepproxy \
&& python sdk/python/tests/run_test_server.py start_keep-web \
&& checkpidfile keep-web \
- && checkhealth keep-web \
+ && checkhealth WebDAV \
&& python sdk/python/tests/run_test_server.py start_arv-git-httpd \
&& checkpidfile arv-git-httpd \
- && checkhealth arv-git-httpd \
+ && checkhealth GitHTTP \
&& python sdk/python/tests/run_test_server.py start_ws \
&& checkpidfile ws \
- && eval $(python sdk/python/tests/run_test_server.py start_nginx) \
- && checkdiscoverydoc $ARVADOS_API_HOST \
- && checkpidfile nginx \
&& export ARVADOS_TEST_PROXY_SERVICES=1 \
&& (env | egrep ^ARVADOS) \
&& fail=0
&& python sdk/python/tests/run_test_server.py stop \
&& all_services_stopped=1
deactivate
+ unset ARVADOS_CONFIG
}
interrupt() {
|| fatal 'rvm gemset setup'
rvm env
+ (bundle version | grep -q 2.0.2) || gem install bundler -v 2.0.2
+ bundle="$(which bundle)"
+ echo "$bundle"
+ "$bundle" version | grep 2.0.2 || fatal 'install bundler'
else
# When our "bundle install"s need to install new gems to
# satisfy dependencies, we want them to go where "gem install
echo "Will install dependencies to $(gem env gemdir)"
echo "Will install arvados gems to $tmpdir_gem_home"
echo "Gem search path is GEM_PATH=$GEM_PATH"
+ bundle="$(gem env gempath | cut -f1 -d:)/bin/bundle"
+ (
+ export HOME=$GEMHOME
+ ("$bundle" version | grep -q 2.0.2) \
+ || gem install --user bundler -v 2.0.2
+ "$bundle" version | grep 2.0.2
+ ) || fatal 'install bundler'
fi
- bundle config || gem install bundler \
- || fatal 'install bundler'
}
with_test_gemset() {
echo "WORKSPACE=$WORKSPACE"
- if [[ -z "$CONFIGSRC" ]] && [[ -d "$HOME/arvados-api-server" ]]; then
- # Jenkins expects us to use this by default.
- CONFIGSRC="$HOME/arvados-api-server"
- fi
-
# Clean up .pyc files that may exist in the workspace
cd "$WORKSPACE"
find -name '*.pyc' -delete
# whine a lot.
setup_ruby_environment
- if [[ -s "$CONFIGSRC/config.yml" ]] ; then
- cp "$CONFIGSRC/config.yml" "$temp/test-config.yml"
- export ARVADOS_CONFIG="$temp/test-config.yml"
- else
- if [[ -s /etc/arvados/config.yml ]] ; then
- python > "$temp/test-config.yml" <<EOF
-import yaml
-import json
-v = list(yaml.safe_load(open('/etc/arvados/config.yml'))['Clusters'].values())[0]['PostgreSQL']
-v['Connection']['dbname'] = 'arvados_test'
-print(json.dumps({"Clusters": { "zzzzz": {'PostgreSQL': v}}}))
-EOF
- export ARVADOS_CONFIG="$temp/test-config.yml"
- else
- if [[ ! -f "$WORKSPACE/services/api/config/database.yml" ]]; then
- fatal "Please provide a database.yml file for the test suite"
- fi
- fi
- fi
-
echo "PATH is $PATH"
}
install_env() {
- (
- set -e
- mkdir -p "$GOPATH/src/git.curoverse.com"
- if [[ ! -h "$GOPATH/src/git.curoverse.com/arvados.git" ]]; then
- for d in \
- "$GOPATH/src/git.curoverse.com/arvados.git/tmp/GOPATH" \
- "$GOPATH/src/git.curoverse.com/arvados.git/tmp" \
- "$GOPATH/src/git.curoverse.com/arvados.git"; do
- [[ -d "$d" ]] && rmdir "$d"
- done
- fi
- for d in \
- "$GOPATH/src/git.curoverse.com/arvados.git/arvados" \
- "$GOPATH/src/git.curoverse.com/arvados.git"; do
- [[ -h "$d" ]] && rm "$d"
- done
- ln -vsfT "$WORKSPACE" "$GOPATH/src/git.curoverse.com/arvados.git"
- go get -v github.com/kardianos/govendor
- cd "$GOPATH/src/git.curoverse.com/arvados.git"
- go get -v -d ...
- "$GOPATH/bin/govendor" sync
- ) || fatal "Go setup failed"
+ go mod download || fatal "Go deps failed"
+ which goimports >/dev/null || go get golang.org/x/tools/cmd/goimports || fatal "Go setup failed"
setup_virtualenv "$VENVDIR" --python python2.7
. "$VENVDIR/bin/activate"
# Needed for run_test_server.py which is used by certain (non-Python) tests.
- pip install --no-cache-dir PyYAML \
- || fatal "pip install PyYAML failed"
+ pip install --no-cache-dir PyYAML future httplib2 \
+ || fatal "`pip install PyYAML future httplib2` failed"
# Preinstall libcloud if using a fork; otherwise nodemanager "pip
# install" won't pick it up by default.
EOF
fi
-
- if ! which bundler >/dev/null
- then
- gem install --user-install bundler || fatal 'Could not install bundler'
- fi
}
retry() {
case "${1}" in
services/api)
stop_services
+ check_arvados_config "$1"
;;
- gofmt | govendor | doc | lib/cli | lib/cloud/azure | lib/cloud/ec2 | lib/cloud/cloudtest | lib/cmd | lib/dispatchcloud/ssh_executor | lib/dispatchcloud/worker)
+ gofmt | doc | lib/cli | lib/cloud/azure | lib/cloud/ec2 | lib/cloud/cloudtest | lib/cmd | lib/dispatchcloud/ssh_executor | lib/dispatchcloud/worker)
+ check_arvados_config "$1"
# don't care whether services are running
;;
*)
+ check_arvados_config "$1"
if ! start_services; then
+ checkexit 1 "$1 tests"
title "test $1 -- failed to start services"
return 1
fi
retry do_test_once ${@}
}
+go_ldflags() {
+ version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}
+ echo "-X git.arvados.org/arvados.git/lib/cmd.version=${version} -X main.version=${version}"
+}
+
do_test_once() {
unset result
then
covername="coverage-$(echo "$1" | sed -e 's/\//_/g')"
coverflags=("-covermode=count" "-coverprofile=$WORKSPACE/tmp/.$covername.tmp")
- # We do "go get -t" here to catch compilation errors
+ # We do "go install" here to catch compilation errors
# before trying "go test". Otherwise, coverage-reporting
# mode makes Go show the wrong line numbers when reporting
# compilation errors.
- go get -ldflags "-X git.curoverse.com/arvados.git/lib/cmd.version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}" -t "git.curoverse.com/arvados.git/$1" && \
- cd "$GOPATH/src/git.curoverse.com/arvados.git/$1" && \
+ go install -ldflags "$(go_ldflags)" "$WORKSPACE/$1" && \
+ cd "$WORKSPACE/$1" && \
if [[ -n "${testargs[$1]}" ]]
then
# "go test -check.vv giturl" doesn't work, but this
else
# The above form gets verbose even when testargs is
# empty, so use this form in such cases:
- go test ${short:+-short} ${coverflags[@]} "git.curoverse.com/arvados.git/$1"
+ go test ${short:+-short} ${coverflags[@]} "git.arvados.org/arvados.git/$1"
fi
result=${result:-$?}
if [[ -f "$WORKSPACE/tmp/.$covername.tmp" ]]
return $result
}
+check_arvados_config() {
+ if [[ "$1" = "env" ]] ; then
+ return
+ fi
+ if [[ -z "$ARVADOS_CONFIG" ]] ; then
+ # Create config file. The run_test_server script requires PyYAML,
+ # so virtualenv needs to be active. Downstream steps like
+ # workbench install which require a valid config.yml.
+ if [[ ! -s "$VENVDIR/bin/activate" ]] ; then
+ install_env
+ fi
+ . "$VENVDIR/bin/activate"
+ cd "$WORKSPACE"
+ eval $(python sdk/python/tests/run_test_server.py setup_config)
+ deactivate
+ fi
+}
+
do_install() {
if [[ -n "${skip[install]}" || ( -n "${only_install}" && "${only_install}" != "${1}" && "${only_install}" != "${2}" ) ]]; then
return 0
fi
+ check_arvados_config "$1"
retry do_install_once ${@}
}
result=1
elif [[ "$2" == "go" ]]
then
- go get -ldflags "-X git.curoverse.com/arvados.git/lib/cmd.version=${ARVADOS_VERSION:-$(git log -n1 --format=%H)-dev}" -t "git.curoverse.com/arvados.git/$1"
+ go install -ldflags "$(go_ldflags)" "$WORKSPACE/$1"
elif [[ "$2" == "pip" ]]
then
# $3 can name a path directory for us to use, including trailing
(
set -e
echo "(Running bundle install --local. 'could not find package' messages are OK.)"
- if ! bundle install --local --no-deployment; then
+ if ! "$bundle" install --local --no-deployment; then
echo "(Running bundle install again, without --local.)"
- bundle install --no-deployment
+ "$bundle" install --no-deployment
fi
- bundle package --all
+ "$bundle" package --all
)
}
}
install_services/api() {
+ stop_services
cd "$WORKSPACE/services/api" \
- && RAILS_ENV=test bundle_install_trylocal
+ && RAILS_ENV=test bundle_install_trylocal \
+ || return 1
rm -f config/environments/test.rb
cp config/environments/test.rb.example config/environments/test.rb
- if [ -n "$CONFIGSRC" ]
- then
- for f in database.yml
- do
- cp "$CONFIGSRC/$f" config/ || fatal "$f"
- done
- fi
-
# Clear out any lingering postgresql connections to the test
# database, so that we can drop it. This assumes the current user
# is a postgresql superuser.
cd "$WORKSPACE/services/api" \
- && test_database=$(python -c "import yaml; print yaml.safe_load(file('config/database.yml'))['test']['database']") \
+ && test_database=$(python -c "import yaml; print yaml.safe_load(file('$ARVADOS_CONFIG'))['Clusters']['zzzzz']['PostgreSQL']['Connection']['dbname']") \
&& psql "$test_database" -c "SELECT pg_terminate_backend (pg_stat_activity.pid::int) FROM pg_stat_activity WHERE pg_stat_activity.datname = '$test_database';" 2>/dev/null
mkdir -p "$WORKSPACE/services/api/tmp/pids"
&& git --git-dir internal.git init \
|| return 1
- cd "$WORKSPACE/services/api" \
- && RAILS_ENV=test bundle exec rails db:environment:set \
- && RAILS_ENV=test bundle exec rake db:drop \
- && RAILS_ENV=test bundle exec rake db:setup \
- && RAILS_ENV=test bundle exec rake db:fixtures:load
+
+ (cd "$WORKSPACE/services/api"
+ export RAILS_ENV=test
+ if "$bundle" exec rails db:environment:set ; then
+ "$bundle" exec rake db:drop
+ fi
+ "$bundle" exec rake db:setup \
+ && "$bundle" exec rake db:fixtures:load
+ )
}
declare -a pythonstuff
cd "$WORKSPACE/apps/workbench" \
&& mkdir -p tmp/cache \
&& RAILS_ENV=test bundle_install_trylocal \
- && RAILS_ENV=test RAILS_GROUPS=assets bundle exec rake npm:install
+ && RAILS_ENV=test RAILS_GROUPS=assets "$bundle" exec rake npm:install
}
test_doc() {
ARVADOS_API_HOST=qr1hi.arvadosapi.com
# Make sure python-epydoc is installed or the next line won't
# do much good!
- PYTHONPATH=$WORKSPACE/sdk/python/ bundle exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
+ PYTHONPATH=$WORKSPACE/sdk/python/ "$bundle" exec rake linkchecker baseurl=file://$WORKSPACE/doc/.site/ arvados_workbench_host=https://workbench.$ARVADOS_API_HOST arvados_api_host=$ARVADOS_API_HOST
)
}
[[ -z "$(gofmt -e -d $dirs | tee -a /dev/stderr)" ]]
}
-test_govendor() {
- (
- set -e
- cd "$GOPATH/src/git.curoverse.com/arvados.git"
- # Remove cached source dirs in workdir. Otherwise, they will
- # not qualify as +missing or +external below, and we won't be
- # able to detect that they're missing from vendor/vendor.json.
- rm -rf vendor/*/
- go get -v -d ...
- "$GOPATH/bin/govendor" sync
- if [[ -n $("$GOPATH/bin/govendor" list +unused +missing +external | tee /dev/stderr) ]]; then
- echo >&2 "vendor/vendor.json has unused or missing dependencies -- try:
-
-(export GOPATH=\"${GOPATH}\"; cd \$GOPATH/src/git.curoverse.com/arvados.git && \$GOPATH/bin/govendor add +missing +external && \$GOPATH/bin/govendor remove +unused)
-
-"
- return 1
- fi
- )
-}
-
test_services/api() {
rm -f "$WORKSPACE/services/api/git-commit.version"
cd "$WORKSPACE/services/api" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake test TESTOPTS='-v -d' ${testargs[services/api]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake test TESTOPTS=\'-v -d\' ${testargs[services/api]}
}
test_sdk/ruby() {
cd "$WORKSPACE/sdk/ruby" \
- && bundle exec rake test TESTOPTS=-v ${testargs[sdk/ruby]}
+ && "$bundle" exec rake test TESTOPTS=-v ${testargs[sdk/ruby]}
}
test_sdk/R() {
test_sdk/cli() {
cd "$WORKSPACE/sdk/cli" \
&& mkdir -p /tmp/keep \
- && KEEP_LOCAL_STORE=/tmp/keep bundle exec rake test TESTOPTS=-v ${testargs[sdk/cli]}
+ && KEEP_LOCAL_STORE=/tmp/keep "$bundle" exec rake test TESTOPTS=-v ${testargs[sdk/cli]}
}
test_sdk/java-v2() {
test_services/login-sync() {
cd "$WORKSPACE/services/login-sync" \
- && bundle exec rake test TESTOPTS=-v ${testargs[services/login-sync]}
+ && "$bundle" exec rake test TESTOPTS=-v ${testargs[services/login-sync]}
}
test_services/nodemanager_integration() {
test_apps/workbench_units() {
local TASK="test:units"
- if [[ -n "${testargs[apps/workbench]}" ]] || [[ -n "${testargs[apps/workbench_units]}" ]]; then
- TASK="test"
- fi
cd "$WORKSPACE/apps/workbench" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake ${TASK} TESTOPTS='-v -d' ${testargs[apps/workbench]} ${testargs[apps/workbench_units]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_units]}
}
test_apps/workbench_functionals() {
local TASK="test:functionals"
- if [[ -n "${testargs[apps/workbench]}" ]] || [[ -n "${testargs[apps/workbench_functionals]}" ]]; then
- TASK="test"
- fi
cd "$WORKSPACE/apps/workbench" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake ${TASK} TESTOPTS='-v -d' ${testargs[apps/workbench]} ${testargs[apps/workbench_functionals]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_functionals]}
}
test_apps/workbench_integration() {
local TASK="test:integration"
- if [[ -n "${testargs[apps/workbench]}" ]] || [[ -n "${testargs[apps/workbench_integration]}" ]]; then
- TASK="test"
- fi
cd "$WORKSPACE/apps/workbench" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake ${TASK} TESTOPTS='-v -d' ${testargs[apps/workbench]} ${testargs[apps/workbench_integration]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} TESTOPTS=\'-v -d\' ${testargs[apps/workbench]} ${testargs[apps/workbench_integration]}
}
test_apps/workbench_benchmark() {
local TASK="test:benchmark"
- if [[ -n "${testargs[apps/workbench]}" ]] || [[ -n "${testargs[apps/workbench_benchmark]}" ]]; then
- TASK="test"
- fi
cd "$WORKSPACE/apps/workbench" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake ${TASK} ${testargs[apps/workbench_benchmark]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} ${testargs[apps/workbench_benchmark]}
}
test_apps/workbench_profile() {
local TASK="test:profile"
- if [[ -n "${testargs[apps/workbench]}" ]] || [[ -n "${testargs[apps/workbench_profile]}" ]]; then
- TASK="test"
- fi
cd "$WORKSPACE/apps/workbench" \
- && env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} bundle exec rake ${TASK} ${testargs[apps/workbench_profile]}
+ && eval env RAILS_ENV=test ${short:+RAILS_TEST_SHORT=1} "$bundle" exec rake ${TASK} ${testargs[apps/workbench_profile]}
}
install_deps() {
do_install sdk/cli
do_install sdk/perl
do_install sdk/python pip
+ do_install sdk/python pip3
do_install sdk/ruby
do_install services/api
do_install services/arv-git-httpd go
fi
do_test gofmt
- do_test govendor
do_test doc
do_test sdk/ruby
do_test sdk/R
projects / arvados.git / blobdiff