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13558: Merge branch 'master' into wtsi-hgi-13558-debug-log-tag-req-id
[arvados.git]
/
apps
/
workbench
/
app
/
helpers
/
application_helper.rb
diff --git
a/apps/workbench/app/helpers/application_helper.rb
b/apps/workbench/app/helpers/application_helper.rb
index 41b33706d1b72d8afad059437ed5cfe1748701bf..106716a0f72f178e826afc6eaaf2908ecb8afe0a 100644
(file)
--- a/
apps/workbench/app/helpers/application_helper.rb
+++ b/
apps/workbench/app/helpers/application_helper.rb
@@
-1,3
+1,7
@@
+# Copyright (C) The Arvados Authors. All rights reserved.
+#
+# SPDX-License-Identifier: AGPL-3.0
+
module ApplicationHelper
def current_user
controller.current_user
module ApplicationHelper
def current_user
controller.current_user
@@
-422,18
+426,23
@@
module ApplicationHelper
lt
end
lt
end
- def get_cwl_
inputs
(workflow)
- if workflow[:
inputs]
- return workflow
[:inputs]
+ def get_cwl_
main
(workflow)
+ if workflow[:
"$graph"].nil?
+ return workflow
else
workflow[:"$graph"].each do |tool|
if tool[:id] == "#main"
else
workflow[:"$graph"].each do |tool|
if tool[:id] == "#main"
- return tool
[:inputs]
+ return tool
end
end
end
end
end
end
end
end
+ def get_cwl_inputs(workflow)
+ get_cwl_main(workflow)[:inputs]
+ end
+
+
def cwl_shortname(id)
if id[0] == "#"
id = id[1..-1]
def cwl_shortname(id)
if id[0] == "#"
id = id[1..-1]
@@
-670,6
+679,12
@@
module ApplicationHelper
render_runtime duration, use_words, round_to_min
end
render_runtime duration, use_words, round_to_min
end
+ # Keep locators are expected to be of the form \"...<pdh/file_path>\"
+ JSON_KEEP_LOCATOR_REGEXP = /(.*)(([0-9a-f]{32}\+\d+)(.*)\"(.*))/
+ def keep_locator_in_json str
+ JSON_KEEP_LOCATOR_REGEXP.match str
+ end
+
private
def is_textile?( object, attr )
is_textile = object.textile_attributes.andand.include?(attr)
private
def is_textile?( object, attr )
is_textile = object.textile_attributes.andand.include?(attr)