"os/signal"
"path"
"path/filepath"
+ "regexp"
"runtime"
"runtime/pprof"
"sort"
dockerclient "github.com/docker/docker/client"
)
+var version = "dev"
+
// IArvadosClient is the minimal Arvados API methods used by crunch-run.
type IArvadosClient interface {
Create(resourceType string, parameters arvadosclient.Dict, output interface{}) error
}
}
+var errorBlacklist = []string{
+ "(?ms).*[Cc]annot connect to the Docker daemon.*",
+ "(?ms).*oci runtime error.*starting container process.*container init.*mounting.*to rootfs.*no such file or directory.*",
+}
+var brokenNodeHook *string = flag.String("broken-node-hook", "", "Script to run if node is detected to be broken (for example, Docker daemon is not running)")
+
+func (runner *ContainerRunner) checkBrokenNode(goterr error) bool {
+ for _, d := range errorBlacklist {
+ if m, e := regexp.MatchString(d, goterr.Error()); m && e == nil {
+ runner.CrunchLog.Printf("Error suggests node is unable to run containers: %v", goterr)
+ if *brokenNodeHook == "" {
+ runner.CrunchLog.Printf("No broken node hook provided, cannot mark node as broken.")
+ } else {
+ runner.CrunchLog.Printf("Running broken node hook %q", *brokenNodeHook)
+ // run killme script
+ c := exec.Command(*brokenNodeHook)
+ c.Stdout = runner.CrunchLog
+ c.Stderr = runner.CrunchLog
+ err := c.Run()
+ if err != nil {
+ runner.CrunchLog.Printf("Error running broken node hook: %v", err)
+ }
+ }
+ return true
+ }
+ }
+ return false
+}
+
// LoadImage determines the docker image id from the container record and
// checks if it is available in the local Docker image store. If not, it loads
// the image from Keep.
cmd []string
}
-// Gather node information and store it on the log for debugging
+// LogNodeInfo gathers node information and store it on the log for debugging
// purposes.
func (runner *ContainerRunner) LogNodeInfo() (err error) {
w := runner.NewLogWriter("node-info")
return nil
}
-// Get and save the raw JSON container record from the API server
+// LogContainerRecord gets and saves the raw JSON container record from the API server
func (runner *ContainerRunner) LogContainerRecord() (err error) {
w := &ArvLogWriter{
ArvClient: runner.ArvClient,
dockertypes.ContainerStartOptions{})
if err != nil {
var advice string
- if strings.Contains(err.Error(), "no such file or directory") {
+ if m, e := regexp.MatchString("(?ms).*(exec|System error).*(no such file or directory|file not found).*", err.Error()); m && e == nil {
advice = fmt.Sprintf("\nPossible causes: command %q is missing, the interpreter given in #! is missing, or script has Windows line endings.", runner.Container.Command[0])
}
return fmt.Errorf("could not start container: %v%s", err, advice)
// Run the full container lifecycle.
func (runner *ContainerRunner) Run() (err error) {
+ runner.CrunchLog.Printf("crunch-run %s started", version)
runner.CrunchLog.Printf("Executing container '%s'", runner.Container.UUID)
hostname, hosterr := os.Hostname()
// check for and/or load image
err = runner.LoadImage()
if err != nil {
- runner.finalState = "Cancelled"
+ if !runner.checkBrokenNode(err) {
+ // Failed to load image but not due to a "broken node"
+ // condition, probably user error.
+ runner.finalState = "Cancelled"
+ }
err = fmt.Errorf("While loading container image: %v", err)
return
}
return
}
- runner.StartCrunchstat()
-
if runner.IsCancelled() {
return
}
}
runner.finalState = "Cancelled"
+ runner.StartCrunchstat()
+
err = runner.StartContainer()
if err != nil {
+ runner.checkBrokenNode(err)
return
}
`Set networking mode for container. Corresponds to Docker network mode (--net).
`)
memprofile := flag.String("memprofile", "", "write memory profile to `file` after running container")
+ getVersion := flag.Bool("version", false, "Print version information and exit.")
flag.Parse()
+ // Print version information if requested
+ if *getVersion {
+ fmt.Printf("crunch-run %s\n", version)
+ return
+ }
+
+ log.Printf("crunch-run %s started", version)
+
containerId := flag.Arg(0)
if *caCertsPath != "" {
}
api.Retries = 8
- var kc *keepclient.KeepClient
- kc, err = keepclient.MakeKeepClient(api)
- if err != nil {
- log.Fatalf("%s: %v", containerId, err)
+ kc, kcerr := keepclient.MakeKeepClient(api)
+ if kcerr != nil {
+ log.Fatalf("%s: %v", containerId, kcerr)
}
kc.BlockCache = &keepclient.BlockCache{MaxBlocks: 2}
kc.Retries = 4
- var docker *dockerclient.Client
// API version 1.21 corresponds to Docker 1.9, which is currently the
// minimum version we want to support.
- docker, err = dockerclient.NewClient(dockerclient.DefaultDockerHost, "1.21", nil, nil)
- if err != nil {
- log.Fatalf("%s: %v", containerId, err)
- }
-
+ docker, dockererr := dockerclient.NewClient(dockerclient.DefaultDockerHost, "1.21", nil, nil)
dockerClientProxy := ThinDockerClientProxy{Docker: docker}
cr := NewContainerRunner(api, kc, dockerClientProxy, containerId)
+
+ if dockererr != nil {
+ cr.CrunchLog.Printf("%s: %v", containerId, dockererr)
+ cr.checkBrokenNode(dockererr)
+ cr.CrunchLog.Close()
+ os.Exit(1)
+ }
+
cr.statInterval = *statInterval
cr.cgroupRoot = *cgroupRoot
cr.expectCgroupParent = *cgroupParent