var Command cmd.Handler = &installCommand{}
-const devtestDatabasePassword = "insecure_arvados_test"
+const goversion = "1.17.7"
+
+const (
+ rubyversion = "2.7.5"
+ bundlerversion = "2.2.19"
+ singularityversion = "3.9.9"
+ pjsversion = "1.9.8"
+ geckoversion = "0.24.0"
+ gradleversion = "5.3.1"
+ nodejsversion = "v12.22.11"
+ devtestDatabasePassword = "insecure_arvados_test"
+ workbench2version = "5e020488f67b5bc919796e0dc8b0b9f3b3ff23b0"
+)
type installCommand struct {
ClusterType string
flags.StringVar(&inst.SourcePath, "source", "/arvados", "source tree location (required for -type=package)")
flags.StringVar(&inst.PackageVersion, "package-version", "0.0.0", "version string to embed in executable files")
flags.BoolVar(&inst.EatMyData, "eatmydata", false, "use eatmydata to speed up install")
- err = flags.Parse(args)
- if err == flag.ErrHelp {
- err = nil
- return 0
- } else if err != nil {
- return 2
+
+ if ok, code := cmd.ParseFlags(flags, prog, args, "", stderr); !ok {
+ return code
} else if *versionFlag {
return cmd.Version.RunCommand(prog, args, stdin, stdout, stderr)
- } else if len(flags.Args()) > 0 {
- err = fmt.Errorf("unrecognized command line arguments: %v", flags.Args())
- return 2
}
var dev, test, prod, pkg bool
pkgs = append(pkgs,
"dpkg-dev",
"eatmydata", // install it for later steps, even if we're not using it now
- "rsync",
)
}
"r-cran-markdown",
"r-cran-roxygen2",
"r-cran-xml",
+ "rsync",
"sudo",
+ "uuid-dev",
"wget",
"xvfb",
)
+ if dev || test {
+ pkgs = append(pkgs, "squashfs-tools") // for singularity
+ pkgs = append(pkgs, "gnupg") // for docker install recipe
+ }
switch {
case osv.Debian && osv.Major >= 10:
pkgs = append(pkgs, "libcurl4")
}
}
+ if dev || test {
+ if havedockerversion, err := exec.Command("docker", "--version").CombinedOutput(); err == nil {
+ logger.Printf("%s installed, assuming that version is ok", bytes.TrimSuffix(havedockerversion, []byte("\n")))
+ } else if osv.Debian {
+ var codename string
+ switch osv.Major {
+ case 10:
+ codename = "buster"
+ case 11:
+ codename = "bullseye"
+ default:
+ err = fmt.Errorf("don't know how to install docker-ce for debian %d", osv.Major)
+ return 1
+ }
+ err = inst.runBash(`
+rm -f /usr/share/keyrings/docker-archive-keyring.gpg
+curl -fsSL https://download.docker.com/linux/debian/gpg | gpg --dearmor -o /usr/share/keyrings/docker-archive-keyring.gpg
+echo 'deb [arch=amd64 signed-by=/usr/share/keyrings/docker-archive-keyring.gpg] https://download.docker.com/linux/debian/ `+codename+` stable' | \
+ tee /etc/apt/sources.list.d/docker.list
+apt-get update
+DEBIAN_FRONTEND=noninteractive apt-get --yes --no-install-recommends install docker-ce
+`, stdout, stderr)
+ if err != nil {
+ return 1
+ }
+ } else {
+ err = fmt.Errorf("don't know how to install docker for osversion %v", osv)
+ return 1
+ }
+ }
+
os.Mkdir("/var/lib/arvados", 0755)
os.Mkdir("/var/lib/arvados/tmp", 0700)
if prod || pkg {
}
if !prod {
- goversion := "1.16.3"
if havegoversion, err := exec.Command("/usr/local/bin/go", "version").CombinedOutput(); err == nil && bytes.HasPrefix(havegoversion, []byte("go version go"+goversion+" ")) {
logger.Print("go " + goversion + " already installed")
} else {
} else {
err = inst.runBash(`
PJS=phantomjs-`+pjsversion+`-linux-x86_64
-wget --progress=dot:giga -O- https://bitbucket.org/ariya/phantomjs/downloads/$PJS.tar.bz2 | tar -C /var/lib/arvados -xjf -
+wget --progress=dot:giga -O- https://cache.arvados.org/$PJS.tar.bz2 | tar -C /var/lib/arvados -xjf -
ln -sf /var/lib/arvados/$PJS/bin/phantomjs /usr/local/bin/
`, stdout, stderr)
if err != nil {
}
}
- nodejsversion := "v10.23.1"
+ nodejsversion := "v12.22.2"
if havenodejsversion, err := exec.Command("/usr/local/bin/node", "--version").CombinedOutput(); err == nil && string(havenodejsversion) == nodejsversion+"\n" {
logger.Print("nodejs " + nodejsversion + " already installed")
} else {
}
}
+ singularityversion := "3.7.4"
+ if havesingularityversion, err := exec.Command("/var/lib/arvados/bin/singularity", "--version").CombinedOutput(); err == nil && strings.Contains(string(havesingularityversion), singularityversion) {
+ logger.Print("singularity " + singularityversion + " already installed")
+ } else if dev || test {
+ err = inst.runBash(`
+S=`+singularityversion+`
+tmp=/var/lib/arvados/tmp/singularity
+trap "rm -r ${tmp}" ERR EXIT
+cd /var/lib/arvados/tmp
+git clone https://github.com/sylabs/singularity
+cd singularity
+git checkout v${S}
+./mconfig --prefix=/var/lib/arvados
+make -C ./builddir
+make -C ./builddir install
+`, stdout, stderr)
+ if err != nil {
+ return 1
+ }
+ }
+
+ err = inst.runBash(`
+install /usr/bin/nsenter /var/lib/arvados/bin/nsenter
+setcap "cap_sys_admin+pei cap_sys_chroot+pei" /var/lib/arvados/bin/nsenter
+`, stdout, stderr)
+ if err != nil {
+ return 1
+ }
+
// The entry in /etc/locale.gen is "en_US.UTF-8"; once
// it's installed, locale -a reports it as
// "en_US.utf8".
{"mkdir", "-p", "log", "tmp", ".bundle", "/var/www/.gem", "/var/www/.bundle", "/var/www/.passenger"},
{"touch", "log/production.log"},
{"chown", "-R", "--from=root", "www-data:www-data", "/var/www/.gem", "/var/www/.bundle", "/var/www/.passenger", "log", "tmp", ".bundle", "Gemfile.lock", "config.ru", "config/environment.rb"},
- {"sudo", "-u", "www-data", "/var/lib/arvados/bin/gem", "install", "--user", "--conservative", "--no-document", "bundler:1.16.6", "bundler:1.17.3", "bundler:2.0.2"},
+ {"sudo", "-u", "www-data", "/var/lib/arvados/bin/gem", "install", "--user", "--conservative", "--no-document", "bundler:2.2.19"},
{"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "install", "--deployment", "--jobs", "8", "--path", "/var/www/.gem"},
{"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "exec", "passenger-config", "build-native-support"},
{"sudo", "-u", "www-data", "/var/lib/arvados/bin/bundle", "exec", "passenger-config", "install-standalone-runtime"},
projects / arvados.git / blobdiff