"encoding/json"
"fmt"
"io"
+ "io/fs"
"io/ioutil"
"math"
"net"
"net/http"
"os"
"os/exec"
- "path/filepath"
"strconv"
"strings"
"sync"
+ "time"
"git.arvados.org/arvados.git/lib/boot"
- "git.arvados.org/arvados.git/lib/config"
"git.arvados.org/arvados.git/sdk/go/arvados"
"git.arvados.org/arvados.git/sdk/go/arvadostest"
"git.arvados.org/arvados.git/sdk/go/ctxlog"
var _ = check.Suite(&IntegrationSuite{})
type IntegrationSuite struct {
- testClusters map[string]*boot.TestCluster
+ super *boot.Supervisor
oidcprovider *arvadostest.OIDCProvider
}
func (s *IntegrationSuite) SetUpSuite(c *check.C) {
- cwd, _ := os.Getwd()
-
s.oidcprovider = arvadostest.NewOIDCProvider(c)
s.oidcprovider.AuthEmail = "user@example.com"
s.oidcprovider.AuthEmailVerified = true
s.oidcprovider.ValidClientID = "clientid"
s.oidcprovider.ValidClientSecret = "clientsecret"
- s.testClusters = map[string]*boot.TestCluster{
- "z1111": nil,
- "z2222": nil,
- "z3333": nil,
- }
hostport := map[string]string{}
- for id := range s.testClusters {
+ for _, id := range []string{"z1111", "z2222", "z3333"} {
hostport[id] = func() string {
// TODO: Instead of expecting random ports on
// 127.0.0.11, 22, 33 to be race-safe, try
return "127.0.0." + id[3:] + ":" + port
}()
}
- for id := range s.testClusters {
- yaml := `Clusters:
+ yaml := "Clusters:\n"
+ for id := range hostport {
+ yaml += `
` + id + `:
Services:
Controller:
Insecure: true
SystemLogs:
Format: text
+ API:
+ MaxConcurrentRequests: 128
+ Containers:
+ CloudVMs:
+ Enable: true
+ Driver: loopback
+ BootProbeCommand: "rm -f /var/lock/crunch-run-broken"
+ ProbeInterval: 1s
+ PollInterval: 5s
+ SyncInterval: 10s
+ TimeoutIdle: 1s
+ TimeoutBooting: 2s
+ RuntimeEngine: singularity
+ CrunchRunArgumentsList: ["--broken-node-hook", "true"]
RemoteClusters:
z1111:
Host: ` + hostport["z1111"] + `
LoginCluster: z1111
`
}
-
- loader := config.NewLoader(bytes.NewBufferString(yaml), ctxlog.TestLogger(c))
- loader.Path = "-"
- loader.SkipLegacy = true
- loader.SkipAPICalls = true
- cfg, err := loader.Load()
- c.Assert(err, check.IsNil)
- tc := boot.NewTestCluster(
- filepath.Join(cwd, "..", ".."),
- id, cfg, "127.0.0."+id[3:], c.Log)
- tc.Super.NoWorkbench1 = true
- tc.Start()
- s.testClusters[id] = tc
}
- for _, tc := range s.testClusters {
- ok := tc.WaitReady()
- c.Assert(ok, check.Equals, true)
+ s.super = &boot.Supervisor{
+ ClusterType: "test",
+ ConfigYAML: yaml,
+ Stderr: ctxlog.LogWriter(c.Log),
+ NoWorkbench1: true,
+ NoWorkbench2: true,
+ OwnTemporaryDatabase: true,
}
+
+ // Give up if startup takes longer than 3m
+ timeout := time.AfterFunc(3*time.Minute, s.super.Stop)
+ defer timeout.Stop()
+ s.super.Start(context.Background())
+ ok := s.super.WaitReady()
+ c.Assert(ok, check.Equals, true)
}
func (s *IntegrationSuite) TearDownSuite(c *check.C) {
- for _, c := range s.testClusters {
- c.Super.Stop()
+ if s.super != nil {
+ s.super.Stop()
+ s.super.Wait()
}
}
func (s *IntegrationSuite) TestDefaultStorageClassesOnCollections(c *check.C) {
- conn := s.testClusters["z1111"].Conn()
- rootctx, _, _ := s.testClusters["z1111"].RootClients()
- userctx, _, kc, _ := s.testClusters["z1111"].UserClients(rootctx, c, conn, s.oidcprovider.AuthEmail, true)
+ conn := s.super.Conn("z1111")
+ rootctx, _, _ := s.super.RootClients("z1111")
+ userctx, _, kc, _ := s.super.UserClients("z1111", rootctx, c, conn, s.oidcprovider.AuthEmail, true)
c.Assert(len(kc.DefaultStorageClasses) > 0, check.Equals, true)
coll, err := conn.CollectionCreate(userctx, arvados.CreateOptions{})
c.Assert(err, check.IsNil)
}
func (s *IntegrationSuite) TestGetCollectionByPDH(c *check.C) {
- conn1 := s.testClusters["z1111"].Conn()
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- conn3 := s.testClusters["z3333"].Conn()
- userctx1, ac1, kc1, _ := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
+ conn1 := s.super.Conn("z1111")
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ conn3 := s.super.Conn("z3333")
+ userctx1, ac1, kc1, _ := s.super.UserClients("z1111", rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
// Create the collection to find its PDH (but don't save it
// anywhere yet)
// Tests bug #18004
func (s *IntegrationSuite) TestRemoteUserAndTokenCacheRace(c *check.C) {
- conn1 := s.testClusters["z1111"].Conn()
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- rootctx2, _, _ := s.testClusters["z2222"].RootClients()
- conn2 := s.testClusters["z2222"].Conn()
- userctx1, _, _, _ := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, "user2@example.com", true)
+ conn1 := s.super.Conn("z1111")
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ rootctx2, _, _ := s.super.RootClients("z2222")
+ conn2 := s.super.Conn("z2222")
+ userctx1, _, _, _ := s.super.UserClients("z1111", rootctx1, c, conn1, "user2@example.com", true)
var wg1, wg2 sync.WaitGroup
creqs := 100
testText := "IntegrationSuite.TestS3WithFederatedToken"
- conn1 := s.testClusters["z1111"].Conn()
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- userctx1, ac1, _, _ := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
- conn3 := s.testClusters["z3333"].Conn()
+ conn1 := s.super.Conn("z1111")
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ userctx1, ac1, _, _ := s.super.UserClients("z1111", rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
+ conn3 := s.super.Conn("z3333")
createColl := func(clusterID string) arvados.Collection {
- _, ac, kc := s.testClusters[clusterID].ClientsWithToken(ac1.AuthToken)
+ _, ac, kc := s.super.ClientsWithToken(clusterID, ac1.AuthToken)
var coll arvados.Collection
fs, err := coll.FileSystem(ac, kc)
c.Assert(err, check.IsNil)
c.Assert(err, check.IsNil)
mtxt, err := fs.MarshalManifest(".")
c.Assert(err, check.IsNil)
- coll, err = s.testClusters[clusterID].Conn().CollectionCreate(userctx1, arvados.CreateOptions{Attrs: map[string]interface{}{
+ coll, err = s.super.Conn(clusterID).CollectionCreate(userctx1, arvados.CreateOptions{Attrs: map[string]interface{}{
"manifest_text": mtxt,
}})
c.Assert(err, check.IsNil)
}
func (s *IntegrationSuite) TestGetCollectionAsAnonymous(c *check.C) {
- conn1 := s.testClusters["z1111"].Conn()
- conn3 := s.testClusters["z3333"].Conn()
- rootctx1, rootac1, rootkc1 := s.testClusters["z1111"].RootClients()
- anonctx3, anonac3, _ := s.testClusters["z3333"].AnonymousClients()
+ conn1 := s.super.Conn("z1111")
+ conn3 := s.super.Conn("z3333")
+ rootctx1, rootac1, rootkc1 := s.super.RootClients("z1111")
+ anonctx3, anonac3, _ := s.super.AnonymousClients("z3333")
// Make sure anonymous token was set
c.Assert(anonac3.AuthToken, check.Not(check.Equals), "")
c.Check(err, check.IsNil)
// Make a v2 token of the z3 anonymous user, and use it on z1
- _, anonac1, _ := s.testClusters["z1111"].ClientsWithToken(outAuth.TokenV2())
+ _, anonac1, _ := s.super.ClientsWithToken("z1111", outAuth.TokenV2())
outUser2, err := anonac1.CurrentUser()
c.Check(err, check.IsNil)
// z3 anonymous user will be mapped to the z1 anonymous user
// the z3333 anonymous user token should not prohibit the request from being
// forwarded.
func (s *IntegrationSuite) TestForwardAnonymousTokenToLoginCluster(c *check.C) {
- conn1 := s.testClusters["z1111"].Conn()
- s.testClusters["z3333"].Conn()
+ conn1 := s.super.Conn("z1111")
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- _, anonac3, _ := s.testClusters["z3333"].AnonymousClients()
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ _, anonac3, _ := s.super.AnonymousClients("z3333")
// Make a user connection to z3333 (using a z1111 user, because that's the login cluster)
- _, userac1, _, _ := s.testClusters["z3333"].UserClients(rootctx1, c, conn1, "user@example.com", true)
+ _, userac1, _, _ := s.super.UserClients("z3333", rootctx1, c, conn1, "user@example.com", true)
// Get the anonymous user token for z3333
var anon3Auth arvados.APIClientAuthorization
)
// The local z3333 anonymous token must be allowed to be forwarded to the login cluster
c.Check(err, check.IsNil)
+
+ userac1.AuthToken = "v2/z1111-gj3su-asdfasdfasdfasd/this-token-does-not-validate-so-anonymous-token-will-be-used-instead"
+ err = userac1.RequestAndDecode(&userList, "GET", "/arvados/v1/users", nil,
+ map[string]interface{}{
+ "reader_tokens": []string{anon3Auth.TokenV2()},
+ "where": where,
+ },
+ )
+ c.Check(err, check.IsNil)
}
// Get a token from the login cluster (z1111), use it to submit a
// container request on z2222.
func (s *IntegrationSuite) TestCreateContainerRequestWithFedToken(c *check.C) {
- conn1 := s.testClusters["z1111"].Conn()
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- _, ac1, _, _ := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
+ conn1 := s.super.Conn("z1111")
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ _, ac1, _, _ := s.super.UserClients("z1111", rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
// Use ac2 to get the discovery doc with a blank token, so the
// SDK doesn't magically pass the z1111 token to z2222 before
// we're ready to start our test.
- _, ac2, _ := s.testClusters["z2222"].ClientsWithToken("")
+ _, ac2, _ := s.super.ClientsWithToken("z2222", "")
var dd map[string]interface{}
err := ac2.RequestAndDecode(&dd, "GET", "discovery/v1/apis/arvados/v1/rest", nil, nil)
c.Assert(err, check.IsNil)
req.Header.Set("Authorization", "OAuth2 "+ac2.AuthToken)
resp, err = arvados.InsecureHTTPClient.Do(req)
c.Assert(err, check.IsNil)
+ defer resp.Body.Close()
err = json.NewDecoder(resp.Body).Decode(&cr)
c.Check(err, check.IsNil)
c.Check(cr.UUID, check.Matches, "z2222-.*")
}
func (s *IntegrationSuite) TestCreateContainerRequestWithBadToken(c *check.C) {
- conn1 := s.testClusters["z1111"].Conn()
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- _, ac1, _, au := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, "user@example.com", true)
+ conn1 := s.super.Conn("z1111")
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ _, ac1, _, au := s.super.UserClients("z1111", rootctx1, c, conn1, "user@example.com", true)
tests := []struct {
name string
c.Assert(err, check.IsNil)
req.Header.Set("Content-Type", "application/json")
resp, err := ac1.Do(req)
- c.Assert(err, check.IsNil)
- c.Assert(resp.StatusCode, check.Equals, tt.expectedCode)
+ if c.Check(err, check.IsNil) {
+ c.Assert(resp.StatusCode, check.Equals, tt.expectedCode)
+ resp.Body.Close()
+ }
}
}
func (s *IntegrationSuite) TestRequestIDHeader(c *check.C) {
- conn1 := s.testClusters["z1111"].Conn()
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- userctx1, ac1, _, _ := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, "user@example.com", true)
+ conn1 := s.super.Conn("z1111")
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ userctx1, ac1, _, _ := s.super.UserClients("z1111", rootctx1, c, conn1, "user@example.com", true)
coll, err := conn1.CollectionCreate(userctx1, arvados.CreateOptions{})
c.Check(err, check.IsNil)
var jresp httpserver.ErrorResponse
err := json.NewDecoder(resp.Body).Decode(&jresp)
c.Check(err, check.IsNil)
- c.Assert(jresp.Errors, check.HasLen, 1)
- c.Check(jresp.Errors[0], check.Matches, `.*\(`+respHdr+`\).*`)
+ if c.Check(jresp.Errors, check.HasLen, 1) {
+ c.Check(jresp.Errors[0], check.Matches, `.*\(`+respHdr+`\).*`)
+ }
}
+ resp.Body.Close()
}
}
// to test tokens that are secret, so there is no API response that will give them back
func (s *IntegrationSuite) dbConn(c *check.C, clusterID string) (*sql.DB, *sql.Conn) {
ctx := context.Background()
- db, err := sql.Open("postgres", s.testClusters[clusterID].Super.Cluster().PostgreSQL.Connection.String())
+ db, err := sql.Open("postgres", s.super.Cluster(clusterID).PostgreSQL.Connection.String())
c.Assert(err, check.IsNil)
conn, err := db.Conn(ctx)
db, dbconn := s.dbConn(c, "z1111")
defer db.Close()
defer dbconn.Close()
- conn1 := s.testClusters["z1111"].Conn()
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- userctx1, ac1, _, au := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, "user@example.com", true)
+ conn1 := s.super.Conn("z1111")
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ userctx1, ac1, _, au := s.super.UserClients("z1111", rootctx1, c, conn1, "user@example.com", true)
tests := []struct {
name string
// one cluster with another cluster as the destination
// and check the tokens are being handled properly
func (s *IntegrationSuite) TestIntermediateCluster(c *check.C) {
- conn1 := s.testClusters["z1111"].Conn()
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- uctx1, ac1, _, _ := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, "user@example.com", true)
+ conn1 := s.super.Conn("z1111")
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ uctx1, ac1, _, _ := s.super.UserClients("z1111", rootctx1, c, conn1, "user@example.com", true)
tests := []struct {
name string
// Test for #17785
func (s *IntegrationSuite) TestFederatedApiClientAuthHandling(c *check.C) {
- rootctx1, rootclnt1, _ := s.testClusters["z1111"].RootClients()
- conn1 := s.testClusters["z1111"].Conn()
+ rootctx1, rootclnt1, _ := s.super.RootClients("z1111")
+ conn1 := s.super.Conn("z1111")
// Make sure LoginCluster is properly configured
for _, cls := range []string{"z1111", "z3333"} {
c.Check(
- s.testClusters[cls].Config.Clusters[cls].Login.LoginCluster,
+ s.super.Cluster(cls).Login.LoginCluster,
check.Equals, "z1111",
check.Commentf("incorrect LoginCluster config on cluster %q", cls))
}
// Get user's UUID & attempt to create a token for it on the remote cluster
- _, _, _, user := s.testClusters["z1111"].UserClients(rootctx1, c, conn1,
+ _, _, _, user := s.super.UserClients("z1111", rootctx1, c, conn1,
"user@example.com", true)
- _, rootclnt3, _ := s.testClusters["z3333"].ClientsWithToken(rootclnt1.AuthToken)
+ _, rootclnt3, _ := s.super.ClientsWithToken("z3333", rootclnt1.AuthToken)
var resp arvados.APIClientAuthorization
err := rootclnt3.RequestAndDecode(
&resp, "POST", "arvados/v1/api_client_authorizations", nil,
c.Assert(strings.HasPrefix(newTok, "v2/z1111-gj3su-"), check.Equals, true)
// Confirm the token works and is from the correct user
- _, rootclnt3bis, _ := s.testClusters["z3333"].ClientsWithToken(newTok)
+ _, rootclnt3bis, _ := s.super.ClientsWithToken("z3333", newTok)
var curUser arvados.User
err = rootclnt3bis.RequestAndDecode(
&curUser, "GET", "arvados/v1/users/current", nil, nil,
c.Assert(curUser.UUID, check.Equals, user.UUID)
// Request the ApiClientAuthorization list using the new token
- _, userClient, _ := s.testClusters["z3333"].ClientsWithToken(newTok)
+ _, userClient, _ := s.super.ClientsWithToken("z3333", newTok)
var acaLst arvados.APIClientAuthorizationList
err = userClient.RequestAndDecode(
&acaLst, "GET", "arvados/v1/api_client_authorizations", nil, nil,
// Test for bug #18076
func (s *IntegrationSuite) TestStaleCachedUserRecord(c *check.C) {
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- _, rootclnt3, _ := s.testClusters["z3333"].RootClients()
- conn1 := s.testClusters["z1111"].Conn()
- conn3 := s.testClusters["z3333"].Conn()
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ _, rootclnt3, _ := s.super.RootClients("z3333")
+ conn1 := s.super.Conn("z1111")
+ conn3 := s.super.Conn("z3333")
// Make sure LoginCluster is properly configured
for _, cls := range []string{"z1111", "z3333"} {
c.Check(
- s.testClusters[cls].Config.Clusters[cls].Login.LoginCluster,
+ s.super.Cluster(cls).Login.LoginCluster,
check.Equals, "z1111",
check.Commentf("incorrect LoginCluster config on cluster %q", cls))
}
// Create some users, request them on the federated cluster so they're cached.
var users []arvados.User
for userNr := 0; userNr < 2; userNr++ {
- _, _, _, user := s.testClusters["z1111"].UserClients(
+ _, _, _, user := s.super.UserClients("z1111",
rootctx1,
c,
conn1,
// Test for bug #16263
func (s *IntegrationSuite) TestListUsers(c *check.C) {
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- conn1 := s.testClusters["z1111"].Conn()
- conn3 := s.testClusters["z3333"].Conn()
- userctx1, _, _, _ := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ conn1 := s.super.Conn("z1111")
+ conn3 := s.super.Conn("z3333")
+ userctx1, _, _, _ := s.super.UserClients("z1111", rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
// Make sure LoginCluster is properly configured
- for cls := range s.testClusters {
+ for _, cls := range []string{"z1111", "z2222", "z3333"} {
c.Check(
- s.testClusters[cls].Config.Clusters[cls].Login.LoginCluster,
+ s.super.Cluster(cls).Login.LoginCluster,
check.Equals, "z1111",
check.Commentf("incorrect LoginCluster config on cluster %q", cls))
}
}
func (s *IntegrationSuite) TestSetupUserWithVM(c *check.C) {
- conn1 := s.testClusters["z1111"].Conn()
- conn3 := s.testClusters["z3333"].Conn()
- rootctx1, rootac1, _ := s.testClusters["z1111"].RootClients()
+ conn1 := s.super.Conn("z1111")
+ conn3 := s.super.Conn("z3333")
+ rootctx1, rootac1, _ := s.super.RootClients("z1111")
// Create user on LoginCluster z1111
- _, _, _, user := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
+ _, _, _, user := s.super.UserClients("z1111", rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
// Make a new root token (because rootClients() uses SystemRootToken)
var outAuth arvados.APIClientAuthorization
c.Check(err, check.IsNil)
// Make a v2 root token to communicate with z3333
- rootctx3, rootac3, _ := s.testClusters["z3333"].ClientsWithToken(outAuth.TokenV2())
+ rootctx3, rootac3, _ := s.super.ClientsWithToken("z3333", outAuth.TokenV2())
// Create VM on z3333
var outVM arvados.VirtualMachine
"hostname": "example",
},
})
+ c.Assert(err, check.IsNil)
c.Check(outVM.UUID[0:5], check.Equals, "z3333")
- c.Check(err, check.IsNil)
// Make sure z3333 user list is up to date
_, err = conn3.UserList(rootctx3, arvados.ListOptions{Limit: 1000})
}
func (s *IntegrationSuite) TestOIDCAccessTokenAuth(c *check.C) {
- conn1 := s.testClusters["z1111"].Conn()
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- s.testClusters["z1111"].UserClients(rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
+ conn1 := s.super.Conn("z1111")
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ s.super.UserClients("z1111", rootctx1, c, conn1, s.oidcprovider.AuthEmail, true)
accesstoken := s.oidcprovider.ValidAccessToken()
{
c.Logf("save collection to %s", clusterID)
- conn := s.testClusters[clusterID].Conn()
- ctx, ac, kc := s.testClusters[clusterID].ClientsWithToken(accesstoken)
+ conn := s.super.Conn(clusterID)
+ ctx, ac, kc := s.super.ClientsWithToken(clusterID, accesstoken)
fs, err := coll.FileSystem(ac, kc)
c.Assert(err, check.IsNil)
for _, readClusterID := range []string{"z1111", "z2222", "z3333"} {
c.Logf("retrieve %s from %s", coll.UUID, readClusterID)
- conn := s.testClusters[readClusterID].Conn()
- ctx, ac, kc := s.testClusters[readClusterID].ClientsWithToken(accesstoken)
+ conn := s.super.Conn(readClusterID)
+ ctx, ac, kc := s.super.ClientsWithToken(readClusterID, accesstoken)
user, err := conn.UserGetCurrent(ctx, arvados.GetOptions{})
c.Assert(err, check.IsNil)
db3, db3conn := s.dbConn(c, "z3333")
defer db3.Close()
defer db3conn.Close()
- rootctx1, _, _ := s.testClusters["z1111"].RootClients()
- rootctx3, _, _ := s.testClusters["z3333"].RootClients()
- conn1 := s.testClusters["z1111"].Conn()
- conn3 := s.testClusters["z3333"].Conn()
- userctx1, _, _, _ := s.testClusters["z1111"].UserClients(rootctx1, c, conn1, "user@example.com", true)
+ rootctx1, _, _ := s.super.RootClients("z1111")
+ rootctx3, _, _ := s.super.RootClients("z3333")
+ conn1 := s.super.Conn("z1111")
+ conn3 := s.super.Conn("z3333")
+ userctx1, _, _, _ := s.super.UserClients("z1111", rootctx1, c, conn1, "user@example.com", true)
user1, err := conn1.UserGetCurrent(userctx1, arvados.GetOptions{})
c.Assert(err, check.IsNil)
row.Scan(&val)
c.Assert(val.Valid, check.Equals, true)
runtimeToken := "v2/" + ctr.AuthUUID + "/" + val.String
- ctrctx, _, _ := s.testClusters["z3333"].ClientsWithToken(runtimeToken)
+ ctrctx, _, _ := s.super.ClientsWithToken("z3333", runtimeToken)
c.Logf("container runtime token %+v", runtimeToken)
_, err = conn3.UserGet(ctrctx, arvados.GetOptions{UUID: user1.UUID})
c.Check(err, check.ErrorMatches, `request failed: .* 401 Unauthorized: cannot use a locally issued token to forward a request to our login cluster \(z1111\)`)
c.Check(err, check.Not(check.ErrorMatches), `(?ms).*127\.0\.0\.11.*`)
}
+
+func (s *IntegrationSuite) TestRunTrivialContainer(c *check.C) {
+ outcoll, _ := s.runContainer(c, "z1111", "", map[string]interface{}{
+ "command": []string{"sh", "-c", "touch \"/out/hello world\" /out/ohai"},
+ "container_image": "busybox:uclibc",
+ "cwd": "/tmp",
+ "environment": map[string]string{},
+ "mounts": map[string]arvados.Mount{"/out": {Kind: "tmp", Capacity: 10000}},
+ "output_path": "/out",
+ "runtime_constraints": arvados.RuntimeConstraints{RAM: 100000000, VCPUs: 1, KeepCacheRAM: 1 << 26},
+ "priority": 1,
+ "state": arvados.ContainerRequestStateCommitted,
+ }, 0)
+ c.Check(outcoll.ManifestText, check.Matches, `\. d41d8.* 0:0:hello\\040world 0:0:ohai\n`)
+ c.Check(outcoll.PortableDataHash, check.Equals, "8fa5dee9231a724d7cf377c5a2f4907c+65")
+}
+
+func (s *IntegrationSuite) TestContainerInputOnDifferentCluster(c *check.C) {
+ conn := s.super.Conn("z1111")
+ rootctx, _, _ := s.super.RootClients("z1111")
+ userctx, ac, _, _ := s.super.UserClients("z1111", rootctx, c, conn, s.oidcprovider.AuthEmail, true)
+ z1coll, err := conn.CollectionCreate(userctx, arvados.CreateOptions{Attrs: map[string]interface{}{
+ "manifest_text": ". d41d8cd98f00b204e9800998ecf8427e+0 0:0:ocelot\n",
+ }})
+ c.Assert(err, check.IsNil)
+
+ outcoll, logcfs := s.runContainer(c, "z2222", ac.AuthToken, map[string]interface{}{
+ "command": []string{"ls", "/in"},
+ "container_image": "busybox:uclibc",
+ "cwd": "/tmp",
+ "environment": map[string]string{},
+ "mounts": map[string]arvados.Mount{
+ "/in": {Kind: "collection", PortableDataHash: z1coll.PortableDataHash},
+ "/out": {Kind: "tmp", Capacity: 10000},
+ },
+ "output_path": "/out",
+ "runtime_constraints": arvados.RuntimeConstraints{RAM: 100000000, VCPUs: 1, KeepCacheRAM: 1 << 26},
+ "priority": 1,
+ "state": arvados.ContainerRequestStateCommitted,
+ "container_count_max": 1,
+ }, -1)
+ if outcoll.UUID == "" {
+ arvmountlog, err := fs.ReadFile(arvados.FS(logcfs), "/arv-mount.txt")
+ c.Check(err, check.IsNil)
+ c.Check(string(arvmountlog), check.Matches, `(?ms).*cannot use a locally issued token to forward a request to our login cluster \(z1111\).*`)
+ c.Skip("this use case is not supported yet")
+ }
+ stdout, err := fs.ReadFile(arvados.FS(logcfs), "/stdout.txt")
+ c.Check(err, check.IsNil)
+ c.Check(string(stdout), check.Equals, "ocelot\n")
+}
+
+func (s *IntegrationSuite) runContainer(c *check.C, clusterID string, token string, ctrSpec map[string]interface{}, expectExitCode int) (outcoll arvados.Collection, logcfs arvados.CollectionFileSystem) {
+ conn := s.super.Conn(clusterID)
+ rootctx, _, _ := s.super.RootClients(clusterID)
+ if token == "" {
+ _, ac, _, _ := s.super.UserClients(clusterID, rootctx, c, conn, s.oidcprovider.AuthEmail, true)
+ token = ac.AuthToken
+ }
+ _, ac, kc := s.super.ClientsWithToken(clusterID, token)
+
+ c.Log("[docker load]")
+ out, err := exec.Command("docker", "load", "--input", arvadostest.BusyboxDockerImage(c)).CombinedOutput()
+ c.Logf("[docker load output] %s", out)
+ c.Check(err, check.IsNil)
+
+ c.Log("[arv-keepdocker]")
+ akd := exec.Command("arv-keepdocker", "--no-resume", "busybox:uclibc")
+ akd.Env = append(os.Environ(), "ARVADOS_API_HOST="+ac.APIHost, "ARVADOS_API_HOST_INSECURE=1", "ARVADOS_API_TOKEN="+ac.AuthToken)
+ out, err = akd.CombinedOutput()
+ c.Logf("[arv-keepdocker output]\n%s", out)
+ c.Check(err, check.IsNil)
+
+ var cr arvados.ContainerRequest
+ err = ac.RequestAndDecode(&cr, "POST", "/arvados/v1/container_requests", nil, map[string]interface{}{
+ "container_request": ctrSpec,
+ })
+ c.Assert(err, check.IsNil)
+
+ showlogs := func(collectionID string) arvados.CollectionFileSystem {
+ var logcoll arvados.Collection
+ err = ac.RequestAndDecode(&logcoll, "GET", "/arvados/v1/collections/"+collectionID, nil, nil)
+ c.Assert(err, check.IsNil)
+ cfs, err := logcoll.FileSystem(ac, kc)
+ c.Assert(err, check.IsNil)
+ fs.WalkDir(arvados.FS(cfs), "/", func(path string, d fs.DirEntry, err error) error {
+ if d.IsDir() || strings.HasPrefix(path, "/log for container") {
+ return nil
+ }
+ f, err := cfs.Open(path)
+ c.Assert(err, check.IsNil)
+ defer f.Close()
+ buf, err := ioutil.ReadAll(f)
+ c.Assert(err, check.IsNil)
+ c.Logf("=== %s\n%s\n", path, buf)
+ return nil
+ })
+ return cfs
+ }
+
+ checkwebdavlogs := func(cr arvados.ContainerRequest) {
+ req, err := http.NewRequest("OPTIONS", "https://"+ac.APIHost+"/arvados/v1/container_requests/"+cr.UUID+"/log/"+cr.ContainerUUID+"/", nil)
+ c.Assert(err, check.IsNil)
+ req.Header.Set("Origin", "http://example.example")
+ resp, err := ac.Do(req)
+ c.Assert(err, check.IsNil)
+ c.Check(resp.StatusCode, check.Equals, http.StatusOK)
+ // Check for duplicate headers -- must use Header[], not Header.Get()
+ c.Check(resp.Header["Access-Control-Allow-Origin"], check.DeepEquals, []string{"*"})
+ }
+
+ var ctr arvados.Container
+ var lastState arvados.ContainerState
+ var status, lastStatus arvados.ContainerStatus
+ var allStatus string
+ checkstatus := func() {
+ err := ac.RequestAndDecode(&status, "GET", "/arvados/v1/container_requests/"+cr.UUID+"/container_status", nil, nil)
+ c.Assert(err, check.IsNil)
+ if status != lastStatus {
+ c.Logf("container status: %s, %s", status.State, status.SchedulingStatus)
+ allStatus += fmt.Sprintf("%s, %s\n", status.State, status.SchedulingStatus)
+ lastStatus = status
+ }
+ }
+ deadline := time.Now().Add(time.Minute)
+ for cr.State != arvados.ContainerRequestStateFinal || (lastStatus.State != arvados.ContainerStateComplete && lastStatus.State != arvados.ContainerStateCancelled) {
+ err = ac.RequestAndDecode(&cr, "GET", "/arvados/v1/container_requests/"+cr.UUID, nil, nil)
+ c.Assert(err, check.IsNil)
+ checkstatus()
+ err = ac.RequestAndDecode(&ctr, "GET", "/arvados/v1/containers/"+cr.ContainerUUID, nil, nil)
+ if err != nil {
+ c.Logf("error getting container state: %s", err)
+ } else if ctr.State != lastState {
+ c.Logf("container state changed to %q", ctr.State)
+ lastState = ctr.State
+ } else {
+ if time.Now().After(deadline) {
+ c.Errorf("timed out, container state is %q", cr.State)
+ if ctr.Log == "" {
+ c.Logf("=== NO LOG COLLECTION saved for container")
+ } else {
+ showlogs(ctr.Log)
+ }
+ c.FailNow()
+ }
+ time.Sleep(time.Second / 2)
+ }
+ }
+ checkstatus()
+ c.Logf("cr.CumulativeCost == %f", cr.CumulativeCost)
+ c.Check(cr.CumulativeCost, check.Not(check.Equals), 0.0)
+ if expectExitCode >= 0 {
+ c.Check(ctr.State, check.Equals, arvados.ContainerStateComplete)
+ c.Check(ctr.ExitCode, check.Equals, expectExitCode)
+ err = ac.RequestAndDecode(&outcoll, "GET", "/arvados/v1/collections/"+cr.OutputUUID, nil, nil)
+ c.Assert(err, check.IsNil)
+ c.Check(allStatus, check.Matches, `Queued, waiting for dispatch\n`+
+ `(Queued, waiting.*\n)*`+
+ `(Locked, waiting for dispatch\n)?`+
+ `(Locked, waiting for new instance to be ready\n)?`+
+ `(Locked, preparing runtime environment\n)?`+
+ `(Running, \n)?`+
+ `Complete, \n`)
+ }
+ logcfs = showlogs(cr.LogUUID)
+ checkwebdavlogs(cr)
+ return outcoll, logcfs
+}
projects / arvados.git / blobdiff