controller.current_user
end
+ def self.match_uuid(uuid)
+ /^([0-9a-z]{5})-([0-9a-z]{5})-([0-9a-z]{15})$/.match(uuid.to_s)
+ end
+
def current_api_host
Rails.configuration.arvados_v1_base.gsub /https?:\/\/|\/arvados\/v1/,''
end
- def render_content_from_database(markup)
- raw RedCloth.new(markup).to_html
+ def render_markup(markup)
+ raw RedCloth.new(markup.to_s).to_html(:refs_arvados, :textile) if markup
end
def human_readable_bytes_html(n)
return h(n) unless n.is_a? Fixnum
+ return "0 bytes" if (n == 0)
orders = {
1 => "bytes",
end
end
end
-
+
return h(n)
- #raw = n.to_s
+ #raw = n.to_s
#cooked = ''
#while raw.length > 3
# cooked = ',' + raw[-3..-1] + cooked
ArvadosBase::resource_class_for_uuid(attrvalue, opts)
end
+ ##
+ # Returns HTML that links to the Arvados object specified in +attrvalue+
+ # Provides various output control and styling options.
+ #
+ # +attrvalue+ an Arvados model object or uuid
+ #
+ # +opts+ a set of flags to control output:
+ #
+ # [:link_text] the link text to use (may include HTML), overrides everything else
+ #
+ # [:friendly_name] whether to use the "friendly" name in the link text (by
+ # calling #friendly_link_name on the object), otherwise use the uuid
+ #
+ # [:with_class_name] prefix the link text with the class name of the model
+ #
+ # [:no_tags] disable tags in the link text (default is to show tags).
+ # Currently tags are only shown for Collections.
+ #
+ # [:thumbnail] if the object is a collection, show an image thumbnail if the
+ # collection consists of a single image file.
+ #
+ # [:no_link] don't create a link, just return the link text
+ #
+ # +style_opts+ additional HTML properties for the anchor tag, passed to link_to
+ #
def link_to_if_arvados_object(attrvalue, opts={}, style_opts={})
if (resource_class = resource_class_for_uuid(attrvalue, opts))
- link_uuid = attrvalue.is_a?(ArvadosBase) ? attrvalue.uuid : attrvalue
+ if attrvalue.is_a? ArvadosBase
+ object = attrvalue
+ link_uuid = attrvalue.uuid
+ else
+ object = nil
+ link_uuid = attrvalue
+ end
link_name = opts[:link_text]
+ tags = ""
if !link_name
- link_name = link_uuid
+ link_name = object.andand.default_name || resource_class.default_name
if opts[:friendly_name]
- begin
- link_name = resource_class.find(link_uuid).friendly_link_name
- rescue RuntimeError
- # If that lookup failed, the link will too. So don't make one.
- return attrvalue
+ if attrvalue.respond_to? :friendly_link_name
+ link_name = attrvalue.friendly_link_name
+ else
+ begin
+ if resource_class.name == 'Collection'
+ link_name = collections_for_object(link_uuid).andand.first.andand.friendly_link_name
+ else
+ link_name = object_for_dataclass(resource_class, link_uuid).andand.friendly_link_name
+ end
+ rescue ArvadosApiClient::NotFoundException
+ # If that lookup failed, the link will too. So don't make one.
+ return attrvalue
+ end
end
end
+ if link_name.nil? or link_name.empty?
+ link_name = attrvalue
+ end
if opts[:with_class_name]
link_name = "#{resource_class.to_s}: #{link_name}"
end
+ if !opts[:no_tags] and resource_class == Collection
+ links_for_object(link_uuid).each do |tag|
+ if tag.link_class.in? ["tag", "identifier"]
+ tags += ' <span class="label label-info">'
+ tags += link_to tag.name, controller: "links", filters: [["link_class", "=", "tag"], ["name", "=", tag.name]].to_json
+ tags += '</span>'
+ end
+ end
+ end
+ if opts[:thumbnail] and resource_class == Collection
+ # add an image thumbnail if the collection consists of a single image file.
+ collections_for_object(link_uuid).each do |c|
+ if c.files.length == 1 and CollectionsHelper::is_image c.files.first[1]
+ link_name += " "
+ link_name += image_tag "#{url_for c}/#{CollectionsHelper::file_path c.files.first}", style: "height: 4em; width: auto"
+ end
+ end
+ end
end
style_opts[:class] = (style_opts[:class] || '') + ' nowrap'
- link_to link_name, { controller: resource_class.to_s.tableize, action: 'show', id: link_uuid }, style_opts
+ if opts[:no_link]
+ raw(link_name)
+ else
+ (link_to raw(link_name), { controller: resource_class.to_s.tableize, action: 'show', id: ((opts[:name_link].andand.uuid) || link_uuid) }, style_opts) + raw(tags)
+ end
else
- attrvalue
+ # just return attrvalue if it is not recognizable as an Arvados object or uuid.
+ if attrvalue.nil? or (attrvalue.is_a? String and attrvalue.empty?)
+ "(none)"
+ else
+ attrvalue
+ end
end
end
def render_editable_attribute(object, attr, attrvalue=nil, htmloptions={})
attrvalue = object.send(attr) if attrvalue.nil?
- return attrvalue if !object.attribute_editable? attr
+ if !object.attribute_editable?(attr, :ever) or
+ (!object.editable? and
+ !object.owner_uuid.in?(my_projects.collect(&:uuid)))
+ if attrvalue && attrvalue.length > 0
+ return render_attribute_as_textile( object, attr, attrvalue, false )
+ else
+ return (attr == 'name' and object.andand.default_name) ||
+ '(none)'
+ end
+ end
input_type = 'text'
case object.class.attribute_info[attr.to_sym].andand[:type]
end
attrvalue = attrvalue.to_json if attrvalue.is_a? Hash or attrvalue.is_a? Array
+ rendervalue = render_attribute_as_textile( object, attr, attrvalue, false )
- link_to attrvalue.to_s, '#', {
- "data-emptytext" => "none",
+ ajax_options = {
+ "data-pk" => {
+ id: object.uuid,
+ key: object.class.to_s.underscore
+ }
+ }
+ if object.uuid
+ ajax_options['data-url'] = url_for(action: "update", id: object.uuid, controller: object.class.to_s.pluralize.underscore)
+ else
+ ajax_options['data-url'] = url_for(action: "create", controller: object.class.to_s.pluralize.underscore)
+ ajax_options['data-pk'][:defaults] = object.attributes
+ end
+ ajax_options['data-pk'] = ajax_options['data-pk'].to_json
+ @unique_id ||= (Time.now.to_f*1000000).to_i
+ span_id = object.uuid.to_s + '-' + attr.to_s + '-' + (@unique_id += 1).to_s
+
+ span_tag = content_tag 'span', rendervalue, {
+ "data-emptytext" => '(none)',
"data-placement" => "bottom",
"data-type" => input_type,
- "data-url" => url_for(action: "update", id: object.uuid, controller: object.class.to_s.pluralize.underscore),
- "data-title" => "Update #{attr.gsub '_', ' '}",
+ "data-title" => "Edit #{attr.to_s.gsub '_', ' '}",
"data-name" => attr,
+ "data-object-uuid" => object.uuid,
+ "data-toggle" => "manual",
+ "data-value" => attrvalue,
+ "id" => span_id,
+ :class => "editable #{is_textile?( object, attr ) ? 'editable-textile' : ''}"
+ }.merge(htmloptions).merge(ajax_options)
+ edit_button = raw('<a href="#" class="btn btn-xs btn-default btn-nodecorate" data-toggle="x-editable tooltip" data-toggle-selector="#' + span_id + '" data-placement="top" title="' + (htmloptions[:tiptitle] || 'edit') + '"><i class="fa fa-fw fa-pencil"></i></a>')
+ if htmloptions[:btnplacement] == :left
+ edit_button + ' ' + span_tag
+ else
+ span_tag + ' ' + edit_button
+ end
+ end
+
+ def render_pipeline_component_attribute(object, attr, subattr, value_info, htmloptions={})
+ datatype = nil
+ required = true
+ attrvalue = value_info
+
+ if value_info.is_a? Hash
+ if value_info[:output_of]
+ return raw("<span class='label label-default'>#{value_info[:output_of]}</span>")
+ end
+ if value_info[:dataclass]
+ dataclass = value_info[:dataclass]
+ end
+ if value_info[:optional] != nil
+ required = (value_info[:optional] != "true")
+ end
+ if value_info[:required] != nil
+ required = value_info[:required]
+ end
+
+ # Pick a suitable attrvalue to show as the current value (i.e.,
+ # the one that would be used if we ran the pipeline right now).
+ if value_info[:value]
+ attrvalue = value_info[:value]
+ elsif value_info[:default]
+ attrvalue = value_info[:default]
+ else
+ attrvalue = ''
+ end
+ preconfigured_search_str = value_info[:search_for]
+ end
+
+ if !object or
+ !object.attribute_editable?(attr, :ever) or
+ (!object.editable? and
+ !object.owner_uuid.in?(my_projects.collect(&:uuid)))
+ return link_to_if_arvados_object attrvalue
+ end
+
+ if dataclass
+ begin
+ dataclass = dataclass.constantize
+ rescue NameError
+ end
+ else
+ dataclass = ArvadosBase.resource_class_for_uuid(attrvalue)
+ end
+
+ id = "#{object.uuid}-#{subattr.join('-')}"
+ dn = "[#{attr}]"
+ subattr.each do |a|
+ dn += "[#{a}]"
+ end
+ if value_info.is_a? Hash
+ dn += '[value]'
+ end
+
+ if dataclass == Collection
+ selection_param = object.class.to_s.underscore + dn
+ display_value = attrvalue
+ if value_info.is_a?(Hash)
+ if (link = Link.find? value_info[:link_uuid])
+ display_value = link.name
+ elsif value_info[:link_name]
+ display_value = value_info[:link_name]
+ end
+ end
+ if (attr == :components) and (subattr.size > 2)
+ chooser_title = "Choose a dataset for #{object.component_input_title(subattr[0], subattr[2])}:"
+ else
+ chooser_title = "Choose a dataset:"
+ end
+ modal_path = choose_collections_path \
+ ({ title: chooser_title,
+ filters: [['owner_uuid', '=', object.owner_uuid]].to_json,
+ action_name: 'OK',
+ action_href: pipeline_instance_path(id: object.uuid),
+ action_method: 'patch',
+ preconfigured_search_str: (preconfigured_search_str || ""),
+ action_data: {
+ merge: true,
+ selection_param: selection_param,
+ success: 'page-refresh'
+ }.to_json,
+ })
+ return content_tag('div', :class => 'input-group') do
+ html = text_field_tag(dn, display_value,
+ :class =>
+ "form-control #{'required' if required}")
+ html + content_tag('span', :class => 'input-group-btn') do
+ link_to('Choose',
+ modal_path,
+ { :class => "btn btn-primary",
+ :remote => true,
+ :method => 'get',
+ })
+ end
+ end
+ end
+
+ if dataclass.andand.is_a?(Class)
+ datatype = 'select'
+ elsif dataclass == 'number'
+ datatype = 'number'
+ elsif attrvalue.is_a? Array
+ # TODO: find a way to edit arrays with x-editable
+ return attrvalue
+ elsif attrvalue.is_a? Fixnum or attrvalue.is_a? Float
+ datatype = 'number'
+ elsif attrvalue.is_a? String
+ datatype = 'text'
+ end
+
+ # preload data
+ preload_uuids = []
+ items = []
+ selectables = []
+
+ attrtext = attrvalue
+ if dataclass.is_a? Class and dataclass < ArvadosBase
+ objects = get_n_objects_of_class dataclass, 10
+ objects.each do |item|
+ items << item
+ preload_uuids << item.uuid
+ end
+ if attrvalue and !attrvalue.empty?
+ preload_uuids << attrvalue
+ end
+ preload_links_for_objects preload_uuids
+
+ if attrvalue and !attrvalue.empty?
+ links_for_object(attrvalue).each do |link|
+ if link.link_class.in? ["tag", "identifier"]
+ attrtext += " [#{link.name}]"
+ end
+ end
+ selectables.append({name: attrtext, uuid: attrvalue, type: dataclass.to_s})
+ end
+ itemuuids = []
+ items.each do |item|
+ itemuuids << item.uuid
+ selectables.append({name: item.uuid, uuid: item.uuid, type: dataclass.to_s})
+ end
+
+ itemuuids.each do |itemuuid|
+ links_for_object(itemuuid).each do |link|
+ if link.link_class.in? ["tag", "identifier"]
+ selectables.each do |selectable|
+ if selectable['uuid'] == link.head_uuid
+ selectable['name'] += ' [' + link.name + ']'
+ end
+ end
+ end
+ end
+ end
+ end
+
+ lt = link_to attrtext, '#', {
+ "data-emptytext" => "none",
+ "data-placement" => "bottom",
+ "data-type" => datatype,
+ "data-url" => url_for(action: "update", id: object.uuid, controller: object.class.to_s.pluralize.underscore, merge: true),
+ "data-title" => "Set value for #{subattr[-1].to_s}",
+ "data-name" => dn,
"data-pk" => "{id: \"#{object.uuid}\", key: \"#{object.class.to_s.underscore}\"}",
- :class => "editable"
+ "data-value" => attrvalue,
+ # "clear" button interferes with form-control's up/down arrows
+ "data-clear" => false,
+ :class => "editable #{'required' if required} form-control",
+ :id => id
}.merge(htmloptions)
+
+ lt += raw("\n<script>")
+
+ if selectables.any?
+ lt += raw("add_form_selection_sources(#{selectables.to_json});\n")
+ end
+
+ lt += raw("$('[data-name=\"#{dn}\"]').editable({source: function() { return select_form_sources('#{dataclass}'); } });\n")
+
+ lt += raw("</script>")
+
+ lt
+ end
+
+ def render_arvados_object_list_start(list, button_text, button_href,
+ params={}, *rest, &block)
+ show_max = params.delete(:show_max) || 3
+ params[:class] ||= 'btn btn-xs btn-default'
+ list[0...show_max].each { |item| yield item }
+ unless list[show_max].nil?
+ link_to(h(button_text) +
+ raw(' <i class="fa fa-fw fa-arrow-circle-right"></i>'),
+ button_href, params, *rest)
+ end
+ end
+
+ def render_controller_partial partial, opts
+ cname = opts.delete :controller_name
+ begin
+ render opts.merge(partial: "#{cname}/#{partial}")
+ rescue ActionView::MissingTemplate
+ render opts.merge(partial: "application/#{partial}")
+ end
+ end
+
+ RESOURCE_CLASS_ICONS = {
+ "Collection" => "fa-archive",
+ "Group" => "fa-users",
+ "Human" => "fa-male", # FIXME: Use a more inclusive icon.
+ "Job" => "fa-gears",
+ "KeepDisk" => "fa-hdd-o",
+ "KeepService" => "fa-exchange",
+ "Link" => "fa-arrows-h",
+ "Node" => "fa-cloud",
+ "PipelineInstance" => "fa-gears",
+ "PipelineTemplate" => "fa-gears",
+ "Repository" => "fa-code-fork",
+ "Specimen" => "fa-flask",
+ "Trait" => "fa-clipboard",
+ "User" => "fa-user",
+ "VirtualMachine" => "fa-terminal",
+ }
+ DEFAULT_ICON_CLASS = "fa-cube"
+
+ def fa_icon_class_for_class(resource_class, default=DEFAULT_ICON_CLASS)
+ RESOURCE_CLASS_ICONS.fetch(resource_class.to_s, default)
+ end
+
+ def fa_icon_class_for_uuid(uuid, default=DEFAULT_ICON_CLASS)
+ fa_icon_class_for_class(resource_class_for_uuid(uuid), default)
+ end
+
+ def fa_icon_class_for_object(object, default=DEFAULT_ICON_CLASS)
+ case class_name = object.class.to_s
+ when "Group"
+ object.group_class ? 'fa-folder' : 'fa-users'
+ else
+ RESOURCE_CLASS_ICONS.fetch(class_name, default)
+ end
+ end
+
+ def chooser_preview_url_for object
+ case object.class.to_s
+ when 'Collection'
+ polymorphic_path(object, tab_pane: 'chooser_preview')
+ else
+ nil
+ end
+ end
+
+ def render_attribute_as_textile( object, attr, attrvalue, truncate )
+ if attrvalue && (is_textile? object, attr)
+ markup = render_markup attrvalue
+ markup = markup[0,markup.index('</p>')+4] if (truncate && markup.index('</p>'))
+ return markup
+ else
+ return attrvalue
+ end
+ end
+
+ def render_localized_date(date, opts="")
+ raw("<span class='utc-date' data-utc-date='#{date}' data-utc-date-opts='noseconds'>#{date}</span>")
+ end
+
+private
+ def is_textile?( object, attr )
+ is_textile = object.textile_attributes.andand.include?(attr)
end
end
projects / arvados.git / blobdiff