collections_pdhs = collections.select {|x| !CollectionsHelper.match(x).nil?}.uniq.compact
collections_uuids = collections - collections_pdhs
preload_collections_for_objects collections_uuids if collections_uuids.any?
- preload_for_pdhs collections_pdhs if collections_pdhs.any?
+ preload_links_for_objects collections_uuids if collections_uuids.any?
preload_objects_for_dataclass(Repository, [current_obj.repository], :name) if current_obj.repository
+
+ # if container_X, preload mounted collections
+ if @object.is_a? Container or @object.is_a? ContainerRequest
+ # get any collections in mounts
+ mounts = current_obj.send(:mounts) if current_obj.respond_to?(:mounts)
+ input_obj = mounts.andand[:"/var/lib/cwl/cwl.input.json"].andand[:content]
+ if input_obj
+ input_obj.to_s.scan(/([0-9a-f]{32}\+\d+)/).each {|cs| collections_pdhs += cs}
+ end
+
+ command = current_obj.send(:command) if current_obj.respond_to?(:command)
+ if command
+ command.to_s.scan(/([0-9a-f]{32}\+\d+)/).each {|cs| collections_pdhs += cs}
+ end
+ end
+
+ collections_pdhs.compact.uniq
+ preload_for_pdhs collections_pdhs if collections_pdhs.any?
+ preload_links_for_objects collections_pdhs if collections_pdhs.any?
%>
<div class="container">
<div class="row">
- <div class="col-md-5">
+ <div class="col-md-6" style="overflow-x: auto">
<% if current_obj.uuid.nil? %>
No <%= current_obj.title %> has been submitted yet.
<% else %>
<table class="table table-condensed">
- <% keys = [:uuid, :modified_by_user_uuid, :created_at, :started_at, :finished_at, :container_uuid, :priority] %>
+ <% keys = [:uuid, :modified_by_user_uuid, :created_at, :started_at, :finished_at, :container_uuid] %>
<% keys << :log_collection if @object.uuid != current_obj.uuid %>
<% keys << :outputs %>
<% keys.each do |k| %>
repo = nil unless repo.andand.http_fetch_url
%>
<% [:script, :repository, :script_version, :supplied_script_version, :nondeterministic,
- :runtime_constraints, :requesting_container_uuid].each do |k| %>
+ :priority, :runtime_constraints, :requesting_container_uuid].each do |k| %>
<% val = current_obj.send(k) if current_obj.respond_to?(k) %>
<% if val %>
<tr valign="top">
</table>
</div>
- <div class="col-md-11">
+ <div class="col-md-12">
<table class="table table-condensed" style="table-layout:fixed;">
<col width="15%" />
<col width="85%" />
</td>
<td style="word-wrap: break-all;">
<% if k == :command %>
- <div style="max-height:200px; overflow-y:auto;">
- <%=val%>
- </div>
+ <% val = JSON.pretty_generate(val) %>
+ <%= render partial: 'show_text_with_locators', locals: {data_height: 200, text_data: val} %>
<% else %>
<%= val %>
<% end %>
cwl.input.json:
</td>
<td style="word-wrap: break-all;">
- <div style="max-height:400px; overflow:auto;">
- <% mnt_inputs.each_line do |l| %>
- <% text_part = l %>
- <% match = l.match /(.*)(\"keep:.*?\")/ %>
- <% if match and match.size == 3 %>
- <% text_part = match[1] + '"keep:' %>
- <% idx = match[2].rindex('"'); loc_part = match[2][6..idx-1] %>
- <% end %>
- <span style="white-space: pre-wrap; margin: none;"><%= text_part %><%= if loc_part then link_to_arvados_object_if_readable(loc_part, loc_part, friendly_name: true) end %><% if loc_part then %><%= match[2][idx] %><br/><% end %></span>
- <% end %>
- </div>
+ <%= render partial: 'show_text_with_locators', locals: {data_height: 400, text_data: mnt_inputs} %>
</td>
</tr>
<% end %>