class JobsController < ApplicationController
+ include JobsHelper
+
+ def generate_provenance(jobs)
+ return if params['tab_pane'] != "Provenance"
+
+ nodes = {}
+ collections = []
+ hashes = []
+ jobs.each do |j|
+ nodes[j[:uuid]] = j
+ hashes << j[:output]
+ ProvenanceHelper::find_collections(j[:script_parameters]) do |hash, uuid|
+ collections << uuid if uuid
+ hashes << hash if hash
+ end
+ nodes[j[:script_version]] = {:uuid => j[:script_version]}
+ end
+
+ Collection.where(uuid: collections).each do |c|
+ nodes[c[:portable_data_hash]] = c
+ end
+
+ Collection.where(portable_data_hash: hashes).each do |c|
+ nodes[c[:portable_data_hash]] = c
+ end
+
+ @svg = ProvenanceHelper::create_provenance_graph nodes, "provenance_svg", {
+ :request => request,
+ :all_script_parameters => true,
+ :script_version_nodes => true}
+ end
+
def index
@svg = ""
if params[:uuid]
- @jobs = Job.where(uuid: params[:uuid])
- nodes = []
- collections = []
- @jobs.each do |j|
- nodes << j
- collections << j[:output]
- collections.concat(ProvenanceHelper::find_collections(j[:script_parameters]))
- nodes << {:uuid => j[:script_version]}
- end
-
- Collection.where(uuid: collections).each do |c|
- nodes << c
- end
-
- @svg = ProvenanceHelper::create_provenance_graph(nodes, {:all_script_parameters => true, :script_version_nodes => true})
+ @objects = Job.where(uuid: params[:uuid])
+ generate_provenance(@objects)
+ render_index
+ else
+ @limit = 20
+ super
+ end
+ end
+
+ def cancel
+ @object.cancel
+ if params[:return_to]
+ redirect_to params[:return_to]
+ else
+ redirect_to @object
+ end
+ end
+
+ def show
+ generate_provenance([@object])
+ super
+ end
+
+ def logs
+ @logs = Log.select(%w(event_type object_uuid event_at properties))
+ .order('event_at DESC')
+ .filter([["event_type", "=", "stderr"],
+ ["object_uuid", "in", [@object.uuid]]])
+ .limit(500)
+ .results
+ .to_a
+ .map{ |e| e.serializable_hash.merge({ 'prepend' => true }) }
+ respond_to do |format|
+ format.json { render json: @logs }
+ end
+ end
+
+ def index_pane_list
+ if params[:uuid]
+ %w(Recent Provenance)
+ else
+ %w(Recent)
+ end
+ end
+
+ def show_pane_list
+ %w(Status Log Details Provenance Advanced)
+ end
+
+ def rerun_job_with_options_popup
+ respond_to do |format|
+ format.js
+ format.html
+ end
+ end
+
+ def rerun_job_with_options
+ job_info = JSON.parse params['job_info']
+
+ @object = Job.new
+ @object.script = job_info['script']
+ @object.repository = job_info['repository']
+ @object.nondeterministic = job_info['nondeterministic']
+ @object.script_parameters = job_info['script_parameters']
+ @object.runtime_constraints = job_info['runtime_constraints']
+
+ if params['use_script'] == 'latest'
+ @object.script_version = job_info['supplied_script_version']
else
- @jobs = Job.all
+ @object.script_version = job_info['script_version']
end
+
+ @object.save!
+ show
end
end