var otherManifest = ". 68a84f561b1d1708c6baff5e019a9ab3+46+Ae5d0af96944a3690becb1decdf60cc1c937f556d@5693216f 0:46:md5sum.txt\n"
var otherPDH = "a3e8f74c6f101eae01fa08bfb4e49b3a+54"
-var subdirManifest = ". 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0abcdefgh11234567890@569fa8c3 0:9:file1_in_main.txt 9:18:file2_in_main.txt 27:5649:zzzzz-8i9sb-bcdefghijkdhvnk.log.txt\n./subdir1 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396cabcdefghij6419876543234@569fa8c4 0:9:file1_in_subdir1.txt 9:18:file2_in_subdir1.txt\n./subdir1/subdir2 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0bcdefghijk544332211@569fa8c5 0:9:file1_in_subdir2.txt 9:19:file2_in_subdir2.txt\n"
-var subdirPDH = "a0def87f80dd594d4675809e83bd4f15+367"
+var normalizedManifestWithSubdirs = ". 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0abcdefgh11234567890@569fa8c3 0:9:file1_in_main.txt 9:18:file2_in_main.txt 27:5649:zzzzz-8i9sb-bcdefghijkdhvnk.log.txt\n./subdir1 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396cabcdefghij6419876543234@569fa8c4 0:9:file1_in_subdir1.txt 9:18:file2_in_subdir1.txt\n./subdir1/subdir2 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0bcdefghijk544332211@569fa8c5 0:9:file1_in_subdir2.txt 9:18:file2_in_subdir2.txt\n"
+var normalizedWithSubdirsPDH = "a0def87f80dd594d4675809e83bd4f15+367"
+
+var denormalizedManifestWithSubdirs = ". 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0abcdefgh11234567890@569fa8c3 0:9:file1_in_main.txt 9:18:file2_in_main.txt 27:5649:zzzzz-8i9sb-bcdefghijkdhvnk.log.txt 5676:10:subdir1/file1_in_subdir1.txt 5686:18:subdir1/file2_in_subdir1.txt\n"
+var denormalizedWithSubdirsPDH = "b0def87f80dd594d4675809e83bd4f15+367"
var fakeAuthUUID = "zzzzz-gj3su-55pqoyepgi2glem"
var fakeAuthToken = "a3ltuwzqcu2u4sc0q7yhpc2w7s00fdcqecg5d6e0u3pfohmbjt"
output.(*arvados.Collection).ManifestText = hwManifest
} else if uuid == otherPDH {
output.(*arvados.Collection).ManifestText = otherManifest
- } else if uuid == subdirPDH {
- output.(*arvados.Collection).ManifestText = subdirManifest
+ } else if uuid == normalizedWithSubdirsPDH {
+ output.(*arvados.Collection).ManifestText = normalizedManifestWithSubdirs
+ } else if uuid == denormalizedWithSubdirsPDH {
+ output.(*arvados.Collection).ManifestText = denormalizedManifestWithSubdirs
}
}
if resourceType == "containers" {
return fw.len
}
-func (client *KeepTestClient) ManifestFileReader(m manifest.Manifest, filename string) (keepclient.ReadCloserWithLen, error) {
+func (fw FileWrapper) Seek(int64, int) (int64, error) {
+ return 0, errors.New("not implemented")
+}
+
+func (client *KeepTestClient) ManifestFileReader(m manifest.Manifest, filename string) (keepclient.Reader, error) {
if filename == hwImageId+".tar" {
rdr := ioutil.NopCloser(&bytes.Buffer{})
client.Called = true
return "", 0, errors.New("KeepError")
}
-func (KeepErrorTestClient) ManifestFileReader(m manifest.Manifest, filename string) (keepclient.ReadCloserWithLen, error) {
+func (KeepErrorTestClient) ManifestFileReader(m manifest.Manifest, filename string) (keepclient.Reader, error) {
return nil, errors.New("KeepError")
}
return 0
}
-func (KeepReadErrorTestClient) ManifestFileReader(m manifest.Manifest, filename string) (keepclient.ReadCloserWithLen, error) {
+func (ErrorReader) Seek(int64, int) (int64, error) {
+ return 0, errors.New("ErrorReader")
+}
+
+func (KeepReadErrorTestClient) ManifestFileReader(m manifest.Manifest, filename string) (keepclient.Reader, error) {
return ErrorReader{}, nil
}
"/tmp": {"kind": "tmp"},
"/tmp/foo": {"kind": "collection",
"portable_data_hash": "a3e8f74c6f101eae01fa08bfb4e49b3a+54",
- "content": {"exclude_from_output": true}
+ "exclude_from_output": true
},
"stdout": {"kind": "file", "path": "/tmp/a/b/c.out"}
},
c.Check(-1, Not(Equals), strings.Index(manifest, "./a/b 307372fa8fd5c146b22ae7a45b49bc31+6 0:6:c.out"))
- origManifestWithDotReplacedAsFoo := strings.Replace(subdirManifest, "./", "./foo/", -1)
+ origManifestWithDotReplacedAsFoo := strings.Replace(normalizedManifestWithSubdirs, "./", "./foo/", -1)
c.Check(-1, Not(Equals), strings.Index(manifest, "./foo"+origManifestWithDotReplacedAsFoo[1:]))
c.Check(-1, Not(Equals), strings.Index(manifest, "./foo 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0abcdefgh11234567890@569fa8c3 9:18:bar"))
c.Check(-1, Not(Equals), strings.Index(manifest, "./foo 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396cabcdefghij6419876543234@569fa8c4 9:18:sub1file2"))
- c.Check(-1, Not(Equals), strings.Index(manifest, "./foo/bar 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0bcdefghijk544332211@569fa8c5 9:19:sub2file2"))
+ c.Check(-1, Not(Equals), strings.Index(manifest, "./foo/bar 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0bcdefghijk544332211@569fa8c5 9:18:sub2file2"))
}
}
}
"/tmp": {"kind": "tmp"},
"/tmp/foo": {"kind": "collection", "portable_data_hash": "a0def87f80dd594d4675809e83bd4f15+367"},
"/tmp/foo/bar": {"kind": "collection", "portable_data_hash": "a0def87f80dd594d4675809e83bd4f15+367/file2_in_main.txt"},
- "/tmp/foo/sub1": {"kind": "collection", "portable_data_hash": "a0def87f80dd594d4675809e83bd4f15+367/subdir1"},
+ "/tmp/foo/sub1": {"kind": "collection", "portable_data_hash": "a0def87f80dd594d4675809e83bd4f15+367/subdir1/"},
"/tmp/foo/sub1file2": {"kind": "collection", "portable_data_hash": "a0def87f80dd594d4675809e83bd4f15+367/subdir1/file2_in_subdir1.txt"},
"/tmp/foo/bar/sub2file2": {"kind": "collection", "portable_data_hash": "a0def87f80dd594d4675809e83bd4f15+367/subdir1/subdir2/file2_in_subdir2.txt"},
"stdout": {"kind": "file", "path": "/tmp/a/b/c.out"}
c.Check(-1, Not(Equals), strings.Index(manifest, "./a/b 307372fa8fd5c146b22ae7a45b49bc31+6 0:6:c.out"))
- origManifestWithDotReplacedAsFoo := strings.Replace(subdirManifest, "./", "./foo/", -1)
+ origManifestWithDotReplacedAsFoo := strings.Replace(normalizedManifestWithSubdirs, "./", "./foo/", -1)
c.Check(-1, Not(Equals), strings.Index(manifest, "./foo"+origManifestWithDotReplacedAsFoo[1:]))
c.Check(-1, Not(Equals), strings.Index(manifest, "./foo 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0abcdefgh11234567890@569fa8c3 9:18:bar"))
c.Check(-1, Not(Equals), strings.Index(manifest, "./foo 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396cabcdefghij6419876543234@569fa8c4 9:18:sub1file2"))
- c.Check(-1, Not(Equals), strings.Index(manifest, "./foo/bar 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0bcdefghijk544332211@569fa8c5 9:19:sub2file2"))
+ c.Check(-1, Not(Equals), strings.Index(manifest, "./foo/bar 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0bcdefghijk544332211@569fa8c5 9:18:sub2file2"))
+ }
+ }
+ }
+}
+
+func (s *TestSuite) TestStdoutWithMountPointsUnderOutputDirDenormalizedManifest(c *C) {
+ helperRecord := `{
+ "command": ["/bin/sh", "-c", "echo $FROBIZ"],
+ "container_image": "d4ab34d3d4f8a72f5c4973051ae69fab+122",
+ "cwd": "/bin",
+ "environment": {"FROBIZ": "bilbo"},
+ "mounts": {
+ "/tmp": {"kind": "tmp"},
+ "/tmp/foo": {"kind": "collection", "portable_data_hash": "b0def87f80dd594d4675809e83bd4f15+367", "path":"/"},
+ "/tmp/foo/bar": {"kind": "collection", "portable_data_hash": "b0def87f80dd594d4675809e83bd4f15+367", "path":"subdir1/file2_in_subdir1.txt"},
+ "stdout": {"kind": "file", "path": "/tmp/a/b/c.out"}
+ },
+ "output_path": "/tmp",
+ "priority": 1,
+ "runtime_constraints": {}
+ }`
+
+ extraMounts := []string{"b0def87f80dd594d4675809e83bd4f15+367"}
+
+ api, _ := FullRunHelper(c, helperRecord, extraMounts, func(t *TestDockerClient) {
+ t.logWriter.Write(dockerLog(1, t.env[0][7:]+"\n"))
+ t.logWriter.Close()
+ t.finish <- dockerclient.WaitResult{ExitCode: 0}
+ })
+
+ c.Check(api.CalledWith("container.exit_code", 0), NotNil)
+ c.Check(api.CalledWith("container.state", "Complete"), NotNil)
+ for _, v := range api.Content {
+ if v["collection"] != nil {
+ collection := v["collection"].(arvadosclient.Dict)
+ if strings.Index(collection["name"].(string), "output") == 0 {
+ manifest := collection["manifest_text"].(string)
+
+ c.Check(-1, Not(Equals), strings.Index(manifest, "./a/b 307372fa8fd5c146b22ae7a45b49bc31+6 0:6:c.out"))
+
+ origManifestWithDotReplacedAsFoo := strings.Replace(denormalizedManifestWithSubdirs, "./", "./foo/", -1)
+ c.Check(-1, Not(Equals), strings.Index(manifest, "./foo"+origManifestWithDotReplacedAsFoo[1:]))
+
+ c.Check(-1, Not(Equals), strings.Index(manifest, "./foo/bar 3e426d509afffb85e06c4c96a7c15e91+27+Aa124ac75e5168396c73c0abcdefgh11234567890@569fa8c3 5686:18:subdir1/file2_in_subdir1.txt"))
}
}
}