13497: Merge branch 'master' into 13497-controller
[arvados.git] / services / crunch-run / crunchrun.go
index adce853a531e0f5012d88796613b30e4ff5a33d3..098c53f8a6a587816703ad6997ceb51eec7f0232 100644 (file)
@@ -32,6 +32,7 @@ import (
        "git.curoverse.com/arvados.git/sdk/go/arvadosclient"
        "git.curoverse.com/arvados.git/sdk/go/keepclient"
        "git.curoverse.com/arvados.git/sdk/go/manifest"
+       "github.com/shirou/gopsutil/process"
        "golang.org/x/net/context"
 
        dockertypes "github.com/docker/docker/api/types"
@@ -83,6 +84,10 @@ type ThinDockerClient interface {
        ImageRemove(ctx context.Context, image string, options dockertypes.ImageRemoveOptions) ([]dockertypes.ImageDeleteResponseItem, error)
 }
 
+type PsProcess interface {
+       CmdlineSlice() ([]string, error)
+}
+
 // ContainerRunner is the main stateful struct used for a single execution of a
 // container.
 type ContainerRunner struct {
@@ -118,6 +123,8 @@ type ContainerRunner struct {
        finalState    string
        parentTemp    string
 
+       ListProcesses func() ([]PsProcess, error)
+
        statLogger       io.WriteCloser
        statReporter     *crunchstat.Reporter
        hoststatLogger   io.WriteCloser
@@ -141,9 +148,10 @@ type ContainerRunner struct {
        cStateLock sync.Mutex
        cCancelled bool // StopContainer() invoked
 
-       enableNetwork string // one of "default" or "always"
-       networkMode   string // passed through to HostConfig.NetworkMode
-       arvMountLog   *ThrottledLogger
+       enableNetwork   string // one of "default" or "always"
+       networkMode     string // passed through to HostConfig.NetworkMode
+       arvMountLog     *ThrottledLogger
+       checkContainerd time.Duration
 }
 
 // setupSignals sets up signal handling to gracefully terminate the underlying
@@ -182,26 +190,31 @@ func (runner *ContainerRunner) stop(sig os.Signal) {
 var errorBlacklist = []string{
        "(?ms).*[Cc]annot connect to the Docker daemon.*",
        "(?ms).*oci runtime error.*starting container process.*container init.*mounting.*to rootfs.*no such file or directory.*",
+       "(?ms).*grpc: the connection is unavailable.*",
 }
 var brokenNodeHook *string = flag.String("broken-node-hook", "", "Script to run if node is detected to be broken (for example, Docker daemon is not running)")
 
+func (runner *ContainerRunner) runBrokenNodeHook() {
+       if *brokenNodeHook == "" {
+               runner.CrunchLog.Printf("No broken node hook provided, cannot mark node as broken.")
+       } else {
+               runner.CrunchLog.Printf("Running broken node hook %q", *brokenNodeHook)
+               // run killme script
+               c := exec.Command(*brokenNodeHook)
+               c.Stdout = runner.CrunchLog
+               c.Stderr = runner.CrunchLog
+               err := c.Run()
+               if err != nil {
+                       runner.CrunchLog.Printf("Error running broken node hook: %v", err)
+               }
+       }
+}
+
 func (runner *ContainerRunner) checkBrokenNode(goterr error) bool {
        for _, d := range errorBlacklist {
                if m, e := regexp.MatchString(d, goterr.Error()); m && e == nil {
                        runner.CrunchLog.Printf("Error suggests node is unable to run containers: %v", goterr)
-                       if *brokenNodeHook == "" {
-                               runner.CrunchLog.Printf("No broken node hook provided, cannot mark node as broken.")
-                       } else {
-                               runner.CrunchLog.Printf("Running broken node hook %q", *brokenNodeHook)
-                               // run killme script
-                               c := exec.Command(*brokenNodeHook)
-                               c.Stdout = runner.CrunchLog
-                               c.Stderr = runner.CrunchLog
-                               err := c.Run()
-                               if err != nil {
-                                       runner.CrunchLog.Printf("Error running broken node hook: %v", err)
-                               }
-                       }
+                       runner.runBrokenNodeHook()
                        return true
                }
        }
@@ -1001,6 +1014,10 @@ func (runner *ContainerRunner) CreateContainer() error {
        runner.ContainerConfig.Volumes = runner.Volumes
 
        maxRAM := int64(runner.Container.RuntimeConstraints.RAM)
+       if maxRAM < 4*1024*1024 {
+               // Docker daemon won't let you set a limit less than 4 MiB
+               maxRAM = 4 * 1024 * 1024
+       }
        runner.HostConfig = dockercontainer.HostConfig{
                Binds: runner.Binds,
                LogConfig: dockercontainer.LogConfig{
@@ -1071,6 +1088,27 @@ func (runner *ContainerRunner) StartContainer() error {
        return nil
 }
 
+// checkContainerd checks if "containerd" is present in the process list.
+func (runner *ContainerRunner) CheckContainerd() error {
+       if runner.checkContainerd == 0 {
+               return nil
+       }
+       p, _ := runner.ListProcesses()
+       for _, i := range p {
+               e, _ := i.CmdlineSlice()
+               if len(e) > 0 {
+                       if strings.Index(e[0], "containerd") > -1 {
+                               return nil
+                       }
+               }
+       }
+
+       // Not found
+       runner.runBrokenNodeHook()
+       runner.stop(nil)
+       return fmt.Errorf("'containerd' not found in process list.")
+}
+
 // WaitFinish waits for the container to terminate, capture the exit code, and
 // close the stdout/stderr logging.
 func (runner *ContainerRunner) WaitFinish() error {
@@ -1082,6 +1120,28 @@ func (runner *ContainerRunner) WaitFinish() error {
        if timeout := runner.Container.SchedulingParameters.MaxRunTime; timeout > 0 {
                runTimeExceeded = time.After(time.Duration(timeout) * time.Second)
        }
+
+       containerdGone := make(chan error)
+       defer close(containerdGone)
+       if runner.checkContainerd > 0 {
+               go func() {
+                       ticker := time.NewTicker(time.Duration(runner.checkContainerd))
+                       defer ticker.Stop()
+                       for {
+                               select {
+                               case <-ticker.C:
+                                       if ck := runner.CheckContainerd(); ck != nil {
+                                               containerdGone <- ck
+                                               return
+                                       }
+                               case <-containerdGone:
+                                       // Channel closed, quit goroutine
+                                       return
+                               }
+                       }
+               }()
+       }
+
        for {
                select {
                case waitBody := <-waitOk:
@@ -1107,6 +1167,9 @@ func (runner *ContainerRunner) WaitFinish() error {
                        runner.CrunchLog.Printf("maximum run time exceeded. Stopping container.")
                        runner.stop(nil)
                        runTimeExceeded = nil
+
+               case err := <-containerdGone:
+                       return err
                }
        }
 }
@@ -1408,6 +1471,12 @@ func (runner *ContainerRunner) Run() (err error) {
                return
        }
 
+       // Sanity check that containerd is running.
+       err = runner.CheckContainerd()
+       if err != nil {
+               return
+       }
+
        // check for and/or load image
        err = runner.LoadImage()
        if err != nil {
@@ -1527,6 +1596,17 @@ func NewContainerRunner(client *arvados.Client, api IArvadosClient, kc IKeepClie
        cr.NewLogWriter = cr.NewArvLogWriter
        cr.RunArvMount = cr.ArvMountCmd
        cr.MkTempDir = ioutil.TempDir
+       cr.ListProcesses = func() ([]PsProcess, error) {
+               pr, err := process.Processes()
+               if err != nil {
+                       return nil, err
+               }
+               ps := make([]PsProcess, len(pr))
+               for i, j := range pr {
+                       ps[i] = j
+               }
+               return ps, nil
+       }
        cr.MkArvClient = func(token string) (IArvadosClient, error) {
                cl, err := arvadosclient.MakeArvadosClient()
                if err != nil {
@@ -1569,6 +1649,7 @@ func main() {
        `)
        memprofile := flag.String("memprofile", "", "write memory profile to `file` after running container")
        getVersion := flag.Bool("version", false, "Print version information and exit.")
+       checkContainerd := flag.Duration("check-containerd", 60*time.Second, "Periodic check if (docker-)containerd is running (use 0s to disable).")
        flag.Parse()
 
        // Print version information if requested
@@ -1624,6 +1705,7 @@ func main() {
        cr.expectCgroupParent = *cgroupParent
        cr.enableNetwork = *enableNetwork
        cr.networkMode = *networkMode
+       cr.checkContainerd = *checkContainerd
        if *cgroupParentSubsystem != "" {
                p := findCgroup(*cgroupParentSubsystem)
                cr.setCgroupParent = p