layout: default
navsection: sdk
navmenu: Python
-title: "Python SDK"
-
+title: "Installation"
...
+{% comment %}
+Copyright (C) The Arvados Authors. All rights reserved.
-The Python SDK provides a generic set of wrappers so you can make API calls easily. It performs some validation before connecting to the API server: for example, it refuses to do an API call if a required parameter is missing.
+SPDX-License-Identifier: CC-BY-SA-3.0
+{% endcomment %}
-The library also includes some conveniences for use in Crunch scripts; see "Crunch utility libraries":crunch-utility-libraries.html for details.
+The Python SDK provides access from Python to the Arvados API and Keep, along with a number of command line tools for using and administering Arvados and Keep.
-h3. Installation
+h2. Installation
If you are logged in to an Arvados VM, the Python SDK should be installed.
-To use the Python SDK elsewhere, you can either install the Python SDK via PyPI or build and install the package using the arvados source tree.
+To use the Python SDK elsewhere, you can install from PyPI or a distribution package.
-{% include 'notebox_begin' %}
-The Python SDK requires Python 2.7
-{% include 'notebox_end' %}
+As of Arvados 2.1, the Python SDK requires Python 3.5+. The last version to support Python 2.7 is Arvados 2.0.4.
-h4. Option 1: install with PyPI
+h2. Option 1: Install from a distribution package
-<notextile>
-<pre>
-$ <code class="userinput">sudo apt-get install python-pip python-dev libattr1-dev libfuse-dev pkg-config python-yaml</code>
-$ <code class="userinput">sudo pip install arvados-python-client</code>
-</pre>
-</notextile>
+This installation method is recommended to make the CLI tools available system-wide. It can coexist with the installation method described in option 2, below.
-_If your version of @pip@ is 1.4 or newer, the @pip install@ command might give an error: "Could not find a version that satisfies the requirement arvados-python-client". If this happens, fix it by adding a @--pre@ flag:_
+First, configure the "Arvados package repositories":../../install/packages.html
-<notextile>
-<pre>
-$ <code class="userinput">sudo pip install --pre arvados-python-client</code>
-</pre>
-</notextile>
+{% assign arvados_component = 'python3-arvados-python-client' %}
-h4. Option 2: install from distribution packages (Debian/Ubuntu only)
+{% include 'install_packages' %}
-First add @http://apt.arvados.org@ to your list of apt repositories:
+h2. Option 2: Install with pip
-<notextile>
-<pre>
-$ <code class="userinput">echo "deb http://apt.arvados.org/ wheezy main" | sudo tee /etc/apt/sources.list.d/apt.arvados.org.list</code>
-</pre>
-</notextile>
+This installation method is recommended to use the SDK in your own Python programs. If installed into a @virtualenv@, it can coexist with the system-wide installation method from a distribution package.
-Then install the package:
+Run @pip install arvados-python-client@ in an appropriate installation environment, such as a @virtualenv@.
+
+Note:
+
+The SDK uses @pycurl@ which depends on the @libcurl@ C library. To build the module you may have to first install additional packages. On Debian 9 this is:
-<notextile>
<pre>
-$ <code class="userinput">sudo apt-get update</code>
-$ <code class="userinput">sudo apt-get install python-arvados-python-client</code>
+$ apt-get install git build-essential python-dev libcurl4-openssl-dev libssl1.0-dev
</pre>
-</notextile>
-h4. Option 3: build and install from source
+For Python 3 this is
-<notextile>
<pre>
-~$ <code class="userinput">sudo apt-get install python-dev libattr1-dev libfuse-dev pkg-config</code>
-~$ <code class="userinput">git clone https://github.com/curoverse/arvados.git</code>
-~$ <code class="userinput">cd arvados/sdk/python</code>
-~/arvados/sdk/python$ <code class="userinput">sudo python setup.py install</code>
+$ apt-get install git build-essential python3-dev libcurl4-openssl-dev libssl1.0-dev
</pre>
-</notextile>
-h4. Test installation
+If your version of @pip@ is 1.4 or newer, the @pip install@ command might give an error: "Could not find a version that satisfies the requirement arvados-python-client". If this happens, try @pip install --pre arvados-python-client@.
+
+h2. Test installation
+
+If the SDK is installed and your @ARVADOS_API_HOST@ and @ARVADOS_API_TOKEN@ environment variables are set up correctly (see "api-tokens":{{site.baseurl}}/user/reference/api-tokens.html for details), @import arvados@ should produce no errors.
-If the SDK is installed and your @ARVADOS_API_HOST@ and @ARVADOS_API_TOKEN@ environment variables are set up correctly (see "api-tokens":{{site.baseurl}}/user/reference/api-tokens.html for details), @import arvados@ should produce no errors:
+If you installed with pip (option 1, above):
<notextile>
-<pre>$ <code class="userinput">python</code>
-Python 2.7.4 (default, Sep 26 2013, 03:20:26)
-[GCC 4.7.3] on linux2
+<pre>~$ <code class="userinput">python</code>
+Python 3.7.3 (default, Jul 25 2020, 13:03:44)
+[GCC 8.3.0] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> <code class="userinput">import arvados</code>
>>> <code class="userinput">arvados.api('v1')</code>
</pre>
</notextile>
-h3. Examples
-
-Get the User object for the current user:
+If you installed from a distribution package (option 2): the package includes a virtualenv, which means the correct Python environment needs to be loaded before the Arvados SDK can be imported. This can be done by activating the virtualenv first:
<notextile>
-<pre><code class="userinput">current_user = arvados.api('v1').users().current().execute()
-</code></pre>
-</notextile>
-
-Get the UUID of an object that was retrieved using the SDK:
-
-<notextile>
-<pre><code class="userinput">my_uuid = current_user['uuid']
-</code></pre>
-</notextile>
-
-Retrieve an object by ID:
-
-<notextile>
-<pre><code class="userinput">some_user = arvados.api('v1').users().get(uuid=my_uuid).execute()
-</code></pre>
-</notextile>
-
-Create an object:
-
-<notextile>
-<pre><code class="userinput">test_link = arvados.api('v1').links().create(
- body={'link_class':'test','name':'test'}).execute()
-</code></pre>
+<pre>~$ <code class="userinput">source /usr/share/python2.7/dist/python-arvados-python-client/bin/activate</code>
+(python-arvados-python-client) ~$ <code class="userinput">python</code>
+Python 3.7.3 (default, Jul 25 2020, 13:03:44)
+[GCC 8.3.0] on linux
+Type "help", "copyright", "credits" or "license" for more information.
+>>> <code class="userinput">import arvados</code>
+>>> <code class="userinput">arvados.api('v1')</code>
+<apiclient.discovery.Resource object at 0x233bb50>
+</pre>
</notextile>
-Update an object:
+Or alternatively, by using the Python executable from the virtualenv directly:
<notextile>
-<pre><code class="userinput">arvados.api('v1').links().update(
- uuid=test_link['uuid'],
- body={'properties':{'foo':'bar'}}).execute()
-</code></pre>
+<pre>~$ <code class="userinput">/usr/share/python2.7/dist/python-arvados-python-client/bin/python</code>
+Python 3.7.3 (default, Jul 25 2020, 13:03:44)
+[GCC 8.3.0] on linux
+Type "help", "copyright", "credits" or "license" for more information.
+>>> <code class="userinput">import arvados</code>
+>>> <code class="userinput">arvados.api('v1')</code>
+<apiclient.discovery.Resource object at 0x233bb50>
+</pre>
</notextile>
-Get a list of objects:
+h2. Usage
-<notextile>
-<pre><code class="userinput">repos = arvados.api('v1').repositories().list().execute()
-len(repos['items'])</code>
-2
-<code class="userinput">repos['items'][0]['uuid']</code>
-u'qr1hi-s0uqq-kg8cawglrf74bmw'
-</code></pre>
-</notextile>
+Check out the "examples":example.html and "cookbook":cookbook.html
h3. Notes
</notextile>
The SDK retrieves the list of API methods from the server at run time. Therefore, the set of available methods is determined by the server version rather than the SDK version.
-
projects / arvados.git / blobdiff